Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 AC026412.2-201ENST00000512270 1075 ntBASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 RNU6-583P-201ENST00000516012 92 ntBASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 IGKV2-26-201ENST00000518305 343 ntBASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 NBEAP1-201ENST00000554452 979 ntBASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 DUXAP3-201ENST00000603616 594 ntBASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 AC128687.1-201ENST00000605304 619 ntBASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 AC008121.2-201ENST00000614647 523 ntBASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 AL133383.2-201ENST00000622958 2336 ntBASIC4.37□□□□□ -1.71
SMC4Q9NTJ3 AP001350.1-201ENST00000601906 1524 ntBASIC4.36□□□□□ -1.71
SMC4Q9NTJ3 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.36□□□□□ -1.71
SMC4Q9NTJ3 AL049780.3-201ENST00000624612 1583 ntBASIC4.36□□□□□ -1.71
SMC4Q9NTJ3 Y_RNA.311-201ENST00000365068 96 ntBASIC4.36□□□□□ -1.71
SMC4Q9NTJ3 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.36□□□□□ -1.71
SMC4Q9NTJ3 MIR7-3-201ENST00000384898 110 ntBASIC4.36□□□□□ -1.71
SMC4Q9NTJ3 MIR670-201ENST00000390142 98 ntBASIC4.36□□□□□ -1.71
SMC4Q9NTJ3 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SMC4Q9NTJ3 AC127526.1-201ENST00000417526 366 ntBASIC4.36□□□□□ -1.71
SMC4Q9NTJ3 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.36□□□□□ -1.71
SMC4Q9NTJ3 CR769776.1-201ENST00000441254 787 ntBASIC4.36□□□□□ -1.71
SMC4Q9NTJ3 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.36□□□□□ -1.71
SMC4Q9NTJ3 RPL23AP14-201ENST00000468281 468 ntBASIC4.36□□□□□ -1.71
SMC4Q9NTJ3 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.36□□□□□ -1.71
SMC4Q9NTJ3 AC010625.1-201ENST00000511296 403 ntBASIC4.36□□□□□ -1.71
SMC4Q9NTJ3 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.36□□□□□ -1.71
SMC4Q9NTJ3 RNU6-27P-201ENST00000516146 107 ntBASIC4.36□□□□□ -1.71
SMC4Q9NTJ3 MIR2276-201ENST00000516886 89 ntBASIC4.36□□□□□ -1.71
SMC4Q9NTJ3 AC107934.2-201ENST00000518653 310 ntBASIC4.36□□□□□ -1.71
SMC4Q9NTJ3 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.36□□□□□ -1.71
SMC4Q9NTJ3 AC005476.1-201ENST00000554427 397 ntBASIC4.36□□□□□ -1.71
SMC4Q9NTJ3 MTND4P33-201ENST00000556706 766 ntBASIC4.36□□□□□ -1.71
SMC4Q9NTJ3 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.36□□□□□ -1.71
SMC4Q9NTJ3 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.36□□□□□ -1.71
SMC4Q9NTJ3 AC006557.5-201ENST00000603126 811 ntBASIC4.36□□□□□ -1.71
SMC4Q9NTJ3 AC010738.1-201ENST00000604970 987 ntBASIC4.36□□□□□ -1.71
SMC4Q9NTJ3 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.36□□□□□ -1.71
SMC4Q9NTJ3 AC092354.2-201ENST00000607786 514 ntBASIC4.36□□□□□ -1.71
SMC4Q9NTJ3 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.36□□□□□ -1.71
SMC4Q9NTJ3 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SMC4Q9NTJ3 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.36□□□□□ -1.71
SMC4Q9NTJ3 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SMC4Q9NTJ3 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 AC126124.2-201ENST00000413542 321 ntBASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 RPS7P15-201ENST00000415804 584 ntBASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 HSFY4P-201ENST00000415994 1181 ntBASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 TOMM22P1-201ENST00000418578 312 ntBASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 HMGB1P49-201ENST00000418882 569 ntBASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 GLRXP1-201ENST00000423261 334 ntBASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 AL451062.2-201ENST00000427515 271 ntBASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 RPL23AP82-202ENST00000427528 469 ntBASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 PTENP1-201ENST00000447117 1215 ntBASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 AC008264.1-201ENST00000447612 367 ntBASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 CENPBD1P1-201ENST00000464061 469 ntBASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 MTND1P16-201ENST00000465177 898 ntBASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 AC087312.1-201ENST00000471411 480 ntBASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 AP001086.1-201ENST00000494882 321 ntBASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 AC090453.1-201ENST00000495560 436 ntBASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 AC112198.1-201ENST00000505369 1220 ntBASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 ARL2BPP6-201ENST00000512757 439 ntBASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 AC006499.2-201ENST00000513470 337 ntBASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 RNU2-58P-201ENST00000516403 183 ntBASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 RN7SKP265-201ENST00000516448 223 ntBASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 DUXAP2-201ENST00000519198 589 ntBASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 NDUFB9P3-201ENST00000521269 501 ntBASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 AL139174.1-201ENST00000531489 886 ntBASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 AL121603.1-201ENST00000553815 142 ntBASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 AC009712.1-201ENST00000564938 316 ntBASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 MIR4425-201ENST00000580572 84 ntBASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 AC055876.5-201ENST00000605667 259 ntBASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 AC025588.4-201ENST00000615802 908 ntBASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 MIR4278-201ENST00000636094 69 ntBASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms