Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 MIR188-201ENST00000385034 86 ntBASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 AC116036.1-201ENST00000412199 367 ntBASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 EI24P1-201ENST00000416584 867 ntBASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 AC093655.2-201ENST00000425735 631 ntBASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 AC000374.1-201ENST00000434698 1745 ntBASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 H3F3BP1-201ENST00000440551 403 ntBASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 AL354710.1-201ENST00000453641 246 ntBASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 SNORA31.3-201ENST00000516029 96 ntBASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 RNU6-390P-201ENST00000516259 103 ntBASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 SNORA31.18-201ENST00000517043 134 ntBASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 AL590705.4-201ENST00000532209 134 ntBASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 FKBP1BP1-201ENST00000553366 325 ntBASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 RN7SL652P-201ENST00000577769 300 ntBASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 MIR3189-201ENST00000578735 73 ntBASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 MIR548AC-201ENST00000585049 88 ntBASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 MIR6780B-201ENST00000610307 79 ntBASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 MTND1P7-201ENST00000632801 297 ntBASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 GUCY1B2-204ENST00000531898 1979 ntBASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.95□□□□□ -1.46
PRDM9Q9NQV7 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 RNA5SP115-201ENST00000411160 107 ntBASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 CYCSP33-201ENST00000414485 327 ntBASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 AL353621.1-201ENST00000418219 243 ntBASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 EEF1B2P3-201ENST00000447718 678 ntBASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 AL596266.1-201ENST00000448132 400 ntBASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 AC092967.1-201ENST00000449016 481 ntBASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 RN7SKP210-201ENST00000459176 261 ntBASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 U8.21-201ENST00000459536 136 ntBASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 RN7SL649P-201ENST00000496974 275 ntBASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 TRAPPC2P7-201ENST00000509650 231 ntBASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 RFPL4AP5-201ENST00000514977 504 ntBASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 RNA5SP206-201ENST00000516703 121 ntBASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 RN7SKP258-201ENST00000517151 304 ntBASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 IGHVII-62-1-201ENST00000519283 235 ntBASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 AC025755.1-201ENST00000521306 278 ntBASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 MIR3154-201ENST00000577829 84 ntBASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 AC034102.8-201ENST00000615146 484 ntBASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PRDM9Q9NQV7 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 AL034546.1-201ENST00000623740 3693 ntBASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 AL359976.1-201ENST00000418655 3528 ntBASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 RN7SKP237-201ENST00000364663 301 ntBASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 Y_RNA.324-201ENST00000365165 102 ntBASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 RNU6-102P-201ENST00000384485 104 ntBASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 MIR578-201ENST00000384828 96 ntBASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 MIR433-201ENST00000384837 93 ntBASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 MIR190B-201ENST00000401119 79 ntBASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 AL079342.1-201ENST00000401460 267 ntBASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 RNA5SP251-201ENST00000410614 137 ntBASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 RNU4-78P-201ENST00000410940 126 ntBASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 AC094019.1-201ENST00000434678 472 ntBASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 AC004938.1-201ENST00000438468 308 ntBASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms