Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 AC107982.1-201ENST00000507171 1300 ntBASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 AP002907.1-201ENST00000606361 1430 ntBASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 SNRPEP3-201ENST00000338402 276 ntBASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 RNA5SP139-201ENST00000364340 117 ntBASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 RNA5SP51-201ENST00000364750 119 ntBASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 RNU1-64P-201ENST00000365443 163 ntBASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 DYNLT3P1-201ENST00000378574 347 ntBASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 AL356131.1-201ENST00000405826 414 ntBASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 ATP5A1P2-201ENST00000412323 255 ntBASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 NDUFB4P5-201ENST00000415445 361 ntBASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 PTP4A1P7-201ENST00000423476 514 ntBASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 AL353705.1-201ENST00000433468 480 ntBASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 TRIM60P9Y-201ENST00000438459 816 ntBASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 USP9YP22-201ENST00000438971 294 ntBASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 TRIM60P11Y-201ENST00000445313 801 ntBASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 RN7SL75P-201ENST00000461926 281 ntBASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 RPS4XP10-201ENST00000465034 731 ntBASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 CAB39P1-201ENST00000502277 460 ntBASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 VN1R104P-201ENST00000505115 1009 ntBASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 AC016550.1-201ENST00000505348 785 ntBASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 AC112198.1-201ENST00000505369 1220 ntBASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 AL359273.1-201ENST00000510918 627 ntBASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 SCARNA20.6-201ENST00000517251 106 ntBASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 AC007991.1-201ENST00000522680 631 ntBASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 AC239860.2-201ENST00000525886 270 ntBASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 GLUD1P4-201ENST00000590914 418 ntBASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 AC022916.3-201ENST00000592961 742 ntBASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 AL445435.1-201ENST00000604232 665 ntBASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 MIR7851-201ENST00000610611 160 ntBASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 AC006338.2-201ENST00000616864 791 ntBASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 AC006249.1-201ENST00000621223 471 ntBASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 AP000676.4-201ENST00000624659 623 ntBASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 CRYM-AS1-204ENST00000637983 556 ntBASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 AL353743.1-202ENST00000431724 1695 ntBASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SND1-IT1Q9HBX3 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SND1-IT1Q9HBX3 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SND1-IT1Q9HBX3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.19□□□□□ -2.06
SND1-IT1Q9HBX3 PTER-201ENST00000298942 3448 ntTSL 5 BASIC2.19□□□□□ -2.06
SND1-IT1Q9HBX3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.19□□□□□ -2.06
SND1-IT1Q9HBX3 MTND5P19-201ENST00000424872 1794 ntBASIC2.19□□□□□ -2.06
SND1-IT1Q9HBX3 AP005901.5-201ENST00000545779 1796 ntBASIC2.19□□□□□ -2.06
SND1-IT1Q9HBX3 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SND1-IT1Q9HBX3 RN7SKP280-201ENST00000364196 304 ntBASIC2.19□□□□□ -2.06
SND1-IT1Q9HBX3 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
SND1-IT1Q9HBX3 CD24P4-201ENST00000382840 243 ntBASIC2.19□□□□□ -2.06
SND1-IT1Q9HBX3 MIR135A2-201ENST00000384854 100 ntBASIC2.19□□□□□ -2.06
SND1-IT1Q9HBX3 RNA5SP252-201ENST00000391131 119 ntBASIC2.19□□□□□ -2.06
SND1-IT1Q9HBX3 AC007066.1-201ENST00000392902 381 ntBASIC2.19□□□□□ -2.06
SND1-IT1Q9HBX3 SNRPEP2-201ENST00000397592 279 ntBASIC2.19□□□□□ -2.06
SND1-IT1Q9HBX3 MTATP6P27-201ENST00000416987 621 ntBASIC2.19□□□□□ -2.06
SND1-IT1Q9HBX3 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC2.19□□□□□ -2.06
SND1-IT1Q9HBX3 CCDC58P2-201ENST00000417131 366 ntBASIC2.19□□□□□ -2.06
SND1-IT1Q9HBX3 ATG3P1-201ENST00000419507 911 ntBASIC2.19□□□□□ -2.06
SND1-IT1Q9HBX3 BX842559.1-201ENST00000419615 532 ntBASIC2.19□□□□□ -2.06
SND1-IT1Q9HBX3 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.19□□□□□ -2.06
SND1-IT1Q9HBX3 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.19□□□□□ -2.06
SND1-IT1Q9HBX3 C1DP1-201ENST00000426049 402 ntBASIC2.19□□□□□ -2.06
SND1-IT1Q9HBX3 OR2AS1P-201ENST00000427827 319 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms