Protein–RNA interactions for Protein: Q9H7L9

SUDS3, Sin3 histone deacetylase corepressor complex component SDS3, humanhuman

Predicted RBP Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3Q9H7L9 AC107871.2-201ENST00000612894 502 ntBASIC3.31□□□□□ -1.88
SUDS3Q9H7L9 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SUDS3Q9H7L9 AC093875.1-201ENST00000623688 504 ntBASIC3.31□□□□□ -1.88
SUDS3Q9H7L9 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SUDS3Q9H7L9 MIR3651-201ENST00000630427 90 ntBASIC3.31□□□□□ -1.88
SUDS3Q9H7L9 AL590396.4-201ENST00000636779 956 ntBASIC3.31□□□□□ -1.88
SUDS3Q9H7L9 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
SUDS3Q9H7L9 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SUDS3Q9H7L9 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
SUDS3Q9H7L9 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SUDS3Q9H7L9 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.3□□□□□ -1.88
SUDS3Q9H7L9 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SUDS3Q9H7L9 RNU6-444P-201ENST00000383988 108 ntBASIC3.3□□□□□ -1.88
SUDS3Q9H7L9 MIR483-201ENST00000385070 76 ntBASIC3.3□□□□□ -1.88
SUDS3Q9H7L9 MTND4P13-201ENST00000402078 1023 ntBASIC3.3□□□□□ -1.88
SUDS3Q9H7L9 RNA5SP38-201ENST00000410750 119 ntBASIC3.3□□□□□ -1.88
SUDS3Q9H7L9 HMGN1P24-201ENST00000412282 298 ntBASIC3.3□□□□□ -1.88
SUDS3Q9H7L9 HMGN2P30-201ENST00000423237 256 ntBASIC3.3□□□□□ -1.88
SUDS3Q9H7L9 OR2AS1P-201ENST00000427827 319 ntBASIC3.3□□□□□ -1.88
SUDS3Q9H7L9 AC114973.1-201ENST00000429057 632 ntBASIC3.3□□□□□ -1.88
SUDS3Q9H7L9 HMGB3P11-201ENST00000440127 604 ntBASIC3.3□□□□□ -1.88
SUDS3Q9H7L9 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.3□□□□□ -1.88
SUDS3Q9H7L9 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.3□□□□□ -1.88
SUDS3Q9H7L9 CDC42P1-201ENST00000456658 548 ntBASIC3.3□□□□□ -1.88
SUDS3Q9H7L9 PRDX3P4-201ENST00000470828 747 ntBASIC3.3□□□□□ -1.88
SUDS3Q9H7L9 AC092902.1-201ENST00000486999 259 ntBASIC3.3□□□□□ -1.88
SUDS3Q9H7L9 AC108078.3-201ENST00000502633 489 ntBASIC3.3□□□□□ -1.88
SUDS3Q9H7L9 AIG1P1-201ENST00000503376 148 ntBASIC3.3□□□□□ -1.88
SUDS3Q9H7L9 DSTNP2-201ENST00000504533 515 ntBASIC3.3□□□□□ -1.88
SUDS3Q9H7L9 SNORA31.20-201ENST00000517111 133 ntBASIC3.3□□□□□ -1.88
SUDS3Q9H7L9 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.3□□□□□ -1.88
SUDS3Q9H7L9 ERHP1-201ENST00000523006 310 ntBASIC3.3□□□□□ -1.88
SUDS3Q9H7L9 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SUDS3Q9H7L9 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.3□□□□□ -1.88
SUDS3Q9H7L9 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.3□□□□□ -1.88
SUDS3Q9H7L9 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.3□□□□□ -1.88
SUDS3Q9H7L9 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.3□□□□□ -1.88
SUDS3Q9H7L9 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.3□□□□□ -1.88
SUDS3Q9H7L9 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.3□□□□□ -1.88
SUDS3Q9H7L9 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.3□□□□□ -1.88
SUDS3Q9H7L9 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.3□□□□□ -1.88
SUDS3Q9H7L9 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.3□□□□□ -1.88
SUDS3Q9H7L9 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.3□□□□□ -1.88
SUDS3Q9H7L9 AC069234.5-201ENST00000611056 416 ntBASIC3.3□□□□□ -1.88
SUDS3Q9H7L9 uc_338.1-201ENST00000612113 180 ntBASIC3.3□□□□□ -1.88
SUDS3Q9H7L9 MIR7112-201ENST00000616126 65 ntBASIC3.3□□□□□ -1.88
SUDS3Q9H7L9 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
SUDS3Q9H7L9 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 RNU6-468P-201ENST00000384003 109 ntBASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 RNU6-207P-201ENST00000384137 107 ntBASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 RNU6-441P-201ENST00000384545 106 ntBASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 U3.19-201ENST00000390893 196 ntBASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 TAF9BP1-201ENST00000396646 746 ntBASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 RNA5SP56-201ENST00000410277 118 ntBASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 RNU4-78P-201ENST00000410940 126 ntBASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 HMGN2P35-201ENST00000412164 270 ntBASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 ATP5C1P1-201ENST00000441945 895 ntBASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 HMGN3P1-201ENST00000453847 193 ntBASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 RPS17P11-201ENST00000474297 293 ntBASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 SNORA74D-201ENST00000516404 141 ntBASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 RN7SKP57-201ENST00000517248 293 ntBASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 AP003355.1-201ENST00000518956 587 ntBASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 AC087373.1-201ENST00000524920 491 ntBASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 MTCO3P13-201ENST00000577757 781 ntBASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 AC022069.1-201ENST00000582910 658 ntBASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 AC245036.5-201ENST00000596330 847 ntBASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 AC103881.1-201ENST00000603476 538 ntBASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 AC013468.1-201ENST00000608680 598 ntBASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
SUDS3Q9H7L9 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
SUDS3Q9H7L9 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SUDS3Q9H7L9 RNU6-525P-201ENST00000363685 104 ntBASIC3.28□□□□□ -1.88
SUDS3Q9H7L9 RNU6-263P-201ENST00000363811 107 ntBASIC3.28□□□□□ -1.88
SUDS3Q9H7L9 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.28□□□□□ -1.88
SUDS3Q9H7L9 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms