Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 RNU2-71P-201ENST00000411395 189 ntBASIC3.17□□□□□ -1.9
NXF3Q9H4D5 HMGB3P23-201ENST00000414981 585 ntBASIC3.17□□□□□ -1.9
NXF3Q9H4D5 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.17□□□□□ -1.9
NXF3Q9H4D5 PTP4A1P7-201ENST00000423476 514 ntBASIC3.17□□□□□ -1.9
NXF3Q9H4D5 SEPT14P24-201ENST00000447236 180 ntBASIC3.17□□□□□ -1.9
NXF3Q9H4D5 RPL7P52-201ENST00000449200 742 ntBASIC3.17□□□□□ -1.9
NXF3Q9H4D5 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.17□□□□□ -1.9
NXF3Q9H4D5 MTATP6P14-201ENST00000455189 673 ntBASIC3.17□□□□□ -1.9
NXF3Q9H4D5 ARPC3P2-201ENST00000457786 533 ntBASIC3.17□□□□□ -1.9
NXF3Q9H4D5 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NXF3Q9H4D5 AC015724.1-201ENST00000478577 156 ntBASIC3.17□□□□□ -1.9
NXF3Q9H4D5 AC008427.1-201ENST00000503102 655 ntBASIC3.17□□□□□ -1.9
NXF3Q9H4D5 AC114967.1-201ENST00000504890 259 ntBASIC3.17□□□□□ -1.9
NXF3Q9H4D5 AC068657.1-201ENST00000520807 306 ntBASIC3.17□□□□□ -1.9
NXF3Q9H4D5 MTCYBP41-201ENST00000528913 1123 ntBASIC3.17□□□□□ -1.9
NXF3Q9H4D5 GTF3AP2-201ENST00000557014 266 ntBASIC3.17□□□□□ -1.9
NXF3Q9H4D5 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.17□□□□□ -1.9
NXF3Q9H4D5 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.17□□□□□ -1.9
NXF3Q9H4D5 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.17□□□□□ -1.9
NXF3Q9H4D5 AC004808.1-201ENST00000627671 721 ntBASIC3.17□□□□□ -1.9
NXF3Q9H4D5 AL356118.1-201ENST00000635272 1078 ntBASIC3.17□□□□□ -1.9
NXF3Q9H4D5 AL590396.2-201ENST00000636511 1041 ntBASIC3.17□□□□□ -1.9
NXF3Q9H4D5 AC068620.4-201ENST00000636730 1182 ntBASIC3.17□□□□□ -1.9
NXF3Q9H4D5 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NXF3Q9H4D5 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
NXF3Q9H4D5 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NXF3Q9H4D5 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.16□□□□□ -1.9
NXF3Q9H4D5 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.16□□□□□ -1.9
NXF3Q9H4D5 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NXF3Q9H4D5 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.16□□□□□ -1.9
NXF3Q9H4D5 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
NXF3Q9H4D5 RNU6-335P-201ENST00000364563 113 ntBASIC3.16□□□□□ -1.9
NXF3Q9H4D5 SNORA9.2-201ENST00000365361 133 ntBASIC3.16□□□□□ -1.9
NXF3Q9H4D5 RNU6-1151P-201ENST00000384684 107 ntBASIC3.16□□□□□ -1.9
NXF3Q9H4D5 MIR1289-1-201ENST00000408836 144 ntBASIC3.16□□□□□ -1.9
NXF3Q9H4D5 RNU6-272P-201ENST00000411028 104 ntBASIC3.16□□□□□ -1.9
NXF3Q9H4D5 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.16□□□□□ -1.9
NXF3Q9H4D5 RPS3AP9-201ENST00000417027 792 ntBASIC3.16□□□□□ -1.9
NXF3Q9H4D5 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.16□□□□□ -1.9
NXF3Q9H4D5 AC246680.2-201ENST00000422106 389 ntBASIC3.16□□□□□ -1.9
NXF3Q9H4D5 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.16□□□□□ -1.9
NXF3Q9H4D5 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NXF3Q9H4D5 FTH1P1-201ENST00000437933 532 ntBASIC3.16□□□□□ -1.9
NXF3Q9H4D5 AC093156.1-201ENST00000440382 670 ntBASIC3.16□□□□□ -1.9
NXF3Q9H4D5 AC004865.1-201ENST00000442276 1003 ntBASIC3.16□□□□□ -1.9
NXF3Q9H4D5 MTND1P33-201ENST00000446251 917 ntBASIC3.16□□□□□ -1.9
NXF3Q9H4D5 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.16□□□□□ -1.9
NXF3Q9H4D5 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.16□□□□□ -1.9
NXF3Q9H4D5 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.16□□□□□ -1.9
NXF3Q9H4D5 AC087879.1-201ENST00000474343 374 ntBASIC3.16□□□□□ -1.9
NXF3Q9H4D5 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NXF3Q9H4D5 AC111000.2-201ENST00000507775 550 ntBASIC3.16□□□□□ -1.9
NXF3Q9H4D5 AC016065.2-201ENST00000514530 444 ntBASIC3.16□□□□□ -1.9
NXF3Q9H4D5 PRELID3BP4-201ENST00000515476 571 ntBASIC3.16□□□□□ -1.9
NXF3Q9H4D5 RN7SKP132-201ENST00000516001 208 ntBASIC3.16□□□□□ -1.9
NXF3Q9H4D5 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.16□□□□□ -1.9
NXF3Q9H4D5 CYB5AP5-201ENST00000549779 389 ntBASIC3.16□□□□□ -1.9
NXF3Q9H4D5 AC099785.1-201ENST00000605697 437 ntBASIC3.16□□□□□ -1.9
NXF3Q9H4D5 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.16□□□□□ -1.9
NXF3Q9H4D5 RNU6-1192P-201ENST00000612197 107 ntBASIC3.16□□□□□ -1.9
NXF3Q9H4D5 RNU6-489P-201ENST00000618289 107 ntBASIC3.16□□□□□ -1.9
NXF3Q9H4D5 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
NXF3Q9H4D5 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.16□□□□□ -1.9
NXF3Q9H4D5 MAPK10-362ENST00000641864 4484 ntBASIC3.16□□□□□ -1.9
NXF3Q9H4D5 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.16□□□□□ -1.9
NXF3Q9H4D5 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NXF3Q9H4D5 AC096644.4-201ENST00000563417 2912 ntBASIC3.16□□□□□ -1.9
NXF3Q9H4D5 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
NXF3Q9H4D5 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
NXF3Q9H4D5 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
NXF3Q9H4D5 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.15□□□□□ -1.91
NXF3Q9H4D5 U3.42-201ENST00000408746 214 ntBASIC3.15□□□□□ -1.91
NXF3Q9H4D5 AC096533.1-201ENST00000411645 353 ntBASIC3.15□□□□□ -1.91
NXF3Q9H4D5 AC245054.2-201ENST00000415639 319 ntBASIC3.15□□□□□ -1.91
NXF3Q9H4D5 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.15□□□□□ -1.91
NXF3Q9H4D5 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.15□□□□□ -1.91
NXF3Q9H4D5 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.15□□□□□ -1.91
NXF3Q9H4D5 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.15□□□□□ -1.91
NXF3Q9H4D5 AC105272.1-201ENST00000438604 198 ntBASIC3.15□□□□□ -1.91
NXF3Q9H4D5 AC002542.1-201ENST00000440683 193 ntBASIC3.15□□□□□ -1.91
NXF3Q9H4D5 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.15□□□□□ -1.91
NXF3Q9H4D5 AL034418.1-201ENST00000448675 860 ntBASIC3.15□□□□□ -1.91
NXF3Q9H4D5 AL162389.1-201ENST00000449233 177 ntBASIC3.15□□□□□ -1.91
NXF3Q9H4D5 DNAJC19P8-201ENST00000452887 259 ntBASIC3.15□□□□□ -1.91
NXF3Q9H4D5 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.15□□□□□ -1.91
NXF3Q9H4D5 CDC42P1-201ENST00000456658 548 ntBASIC3.15□□□□□ -1.91
NXF3Q9H4D5 AP002884.2-201ENST00000471647 395 ntBASIC3.15□□□□□ -1.91
NXF3Q9H4D5 RN7SL633P-201ENST00000488974 297 ntBASIC3.15□□□□□ -1.91
NXF3Q9H4D5 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.15□□□□□ -1.91
NXF3Q9H4D5 RNA5SP356-201ENST00000515972 94 ntBASIC3.15□□□□□ -1.91
NXF3Q9H4D5 RNA5SP367-201ENST00000516557 118 ntBASIC3.15□□□□□ -1.91
NXF3Q9H4D5 HMGB1P1-201ENST00000522557 636 ntBASIC3.15□□□□□ -1.91
NXF3Q9H4D5 AF279873.1-201ENST00000523393 313 ntBASIC3.15□□□□□ -1.91
NXF3Q9H4D5 AC124293.1-201ENST00000530034 493 ntBASIC3.15□□□□□ -1.91
NXF3Q9H4D5 AC107016.2-201ENST00000547968 190 ntBASIC3.15□□□□□ -1.91
NXF3Q9H4D5 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.15□□□□□ -1.91
NXF3Q9H4D5 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.15□□□□□ -1.91
NXF3Q9H4D5 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.15□□□□□ -1.91
NXF3Q9H4D5 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.15□□□□□ -1.91
NXF3Q9H4D5 AC023824.3-201ENST00000569003 562 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms