Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 GJA6P-201ENST00000415117 1042 ntBASIC4.76□□□□□ -1.65
VPS11Q9H270 AC004690.1-201ENST00000418216 328 ntBASIC4.76□□□□□ -1.65
VPS11Q9H270 FCF1P1-201ENST00000432690 571 ntBASIC4.76□□□□□ -1.65
VPS11Q9H270 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS11Q9H270 RPL23AP33-201ENST00000442301 452 ntBASIC4.76□□□□□ -1.65
VPS11Q9H270 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS11Q9H270 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS11Q9H270 PPIAP3-201ENST00000450588 505 ntBASIC4.76□□□□□ -1.65
VPS11Q9H270 AL590365.1-201ENST00000450788 243 ntBASIC4.76□□□□□ -1.65
VPS11Q9H270 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS11Q9H270 AC130509.1-201ENST00000464158 433 ntBASIC4.76□□□□□ -1.65
VPS11Q9H270 AC108022.1-201ENST00000493466 478 ntBASIC4.76□□□□□ -1.65
VPS11Q9H270 CCDC34P1-201ENST00000507441 517 ntBASIC4.76□□□□□ -1.65
VPS11Q9H270 MRPS33P2-201ENST00000507850 322 ntBASIC4.76□□□□□ -1.65
VPS11Q9H270 BTF3P13-201ENST00000513224 490 ntBASIC4.76□□□□□ -1.65
VPS11Q9H270 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS11Q9H270 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS11Q9H270 AC026951.1-201ENST00000559530 2459 ntBASIC4.76□□□□□ -1.65
VPS11Q9H270 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS11Q9H270 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS11Q9H270 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS11Q9H270 AC015912.2-201ENST00000571053 181 ntBASIC4.76□□□□□ -1.65
VPS11Q9H270 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS11Q9H270 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS11Q9H270 AC243960.4-201ENST00000600532 288 ntBASIC4.76□□□□□ -1.65
VPS11Q9H270 RPL7P50-201ENST00000600588 727 ntBASIC4.76□□□□□ -1.65
VPS11Q9H270 AC008638.3-201ENST00000603341 463 ntBASIC4.76□□□□□ -1.65
VPS11Q9H270 AC007621.1-201ENST00000604544 437 ntBASIC4.76□□□□□ -1.65
VPS11Q9H270 AL121932.1-201ENST00000605542 214 ntBASIC4.76□□□□□ -1.65
VPS11Q9H270 MIR6886-201ENST00000619864 61 ntBASIC4.76□□□□□ -1.65
VPS11Q9H270 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.76□□□□□ -1.65
VPS11Q9H270 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS11Q9H270 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS11Q9H270 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS11Q9H270 AC099654.2-201ENST00000433031 1980 ntBASIC4.76□□□□□ -1.65
VPS11Q9H270 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS11Q9H270 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS11Q9H270 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.76□□□□□ -1.65
VPS11Q9H270 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS11Q9H270 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
VPS11Q9H270 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS11Q9H270 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
VPS11Q9H270 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.75□□□□□ -1.65
VPS11Q9H270 TLK1P1-201ENST00000456760 2440 ntBASIC4.75□□□□□ -1.65
VPS11Q9H270 PABPC1P6-201ENST00000445594 1829 ntBASIC4.75□□□□□ -1.65
VPS11Q9H270 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VPS11Q9H270 RPL23P2-201ENST00000320371 421 ntBASIC4.75□□□□□ -1.65
VPS11Q9H270 SNORA33.2-201ENST00000365413 134 ntBASIC4.75□□□□□ -1.65
VPS11Q9H270 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VPS11Q9H270 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.75□□□□□ -1.65
VPS11Q9H270 Y_RNA.459-201ENST00000384251 102 ntBASIC4.75□□□□□ -1.65
VPS11Q9H270 RNU6-331P-201ENST00000384724 107 ntBASIC4.75□□□□□ -1.65
VPS11Q9H270 RPS12P23-201ENST00000419579 400 ntBASIC4.75□□□□□ -1.65
VPS11Q9H270 MTCO2P5-201ENST00000422621 426 ntBASIC4.75□□□□□ -1.65
VPS11Q9H270 AL365400.1-201ENST00000431854 640 ntBASIC4.75□□□□□ -1.65
VPS11Q9H270 LYPLA1P1-201ENST00000434514 622 ntBASIC4.75□□□□□ -1.65
VPS11Q9H270 AL590399.6-201ENST00000446396 307 ntBASIC4.75□□□□□ -1.65
VPS11Q9H270 RPL23AP56-201ENST00000460778 453 ntBASIC4.75□□□□□ -1.65
VPS11Q9H270 PLGLA-201ENST00000465668 449 ntBASIC4.75□□□□□ -1.65
VPS11Q9H270 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VPS11Q9H270 RN7SL30P-201ENST00000488416 306 ntBASIC4.75□□□□□ -1.65
VPS11Q9H270 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS11Q9H270 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.75□□□□□ -1.65
VPS11Q9H270 HIGD1AP14-201ENST00000507617 282 ntBASIC4.75□□□□□ -1.65
VPS11Q9H270 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS11Q9H270 AC093809.1-201ENST00000509155 340 ntBASIC4.75□□□□□ -1.65
VPS11Q9H270 AC004980.4-201ENST00000513375 203 ntBASIC4.75□□□□□ -1.65
VPS11Q9H270 ATP5LP3-201ENST00000514223 304 ntBASIC4.75□□□□□ -1.65
VPS11Q9H270 SNORA19.2-201ENST00000516013 114 ntBASIC4.75□□□□□ -1.65
VPS11Q9H270 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
VPS11Q9H270 BRD9P1-201ENST00000529855 560 ntBASIC4.75□□□□□ -1.65
VPS11Q9H270 AP003034.1-201ENST00000534621 422 ntBASIC4.75□□□□□ -1.65
VPS11Q9H270 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.75□□□□□ -1.65
VPS11Q9H270 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.75□□□□□ -1.65
VPS11Q9H270 RPL21P5-201ENST00000554662 472 ntBASIC4.75□□□□□ -1.65
VPS11Q9H270 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.75□□□□□ -1.65
VPS11Q9H270 AC104785.1-201ENST00000603220 588 ntBASIC4.75□□□□□ -1.65
VPS11Q9H270 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.75□□□□□ -1.65
VPS11Q9H270 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS11Q9H270 AC093799.2-201ENST00000610062 578 ntBASIC4.75□□□□□ -1.65
VPS11Q9H270 AC009268.2-201ENST00000621925 457 ntBASIC4.75□□□□□ -1.65
VPS11Q9H270 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS11Q9H270 AC055839.1-201ENST00000634467 498 ntBASIC4.75□□□□□ -1.65
VPS11Q9H270 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
VPS11Q9H270 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS11Q9H270 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.75□□□□□ -1.65
VPS11Q9H270 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS11Q9H270 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VPS11Q9H270 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS11Q9H270 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
VPS11Q9H270 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS11Q9H270 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.75□□□□□ -1.65
VPS11Q9H270 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS11Q9H270 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS11Q9H270 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.74□□□□□ -1.65
VPS11Q9H270 AP002907.1-201ENST00000606361 1430 ntBASIC4.74□□□□□ -1.65
VPS11Q9H270 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VPS11Q9H270 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VPS11Q9H270 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VPS11Q9H270 OR5P1P-201ENST00000299512 925 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms