Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.59□□□□□ -1.99
SLIRPQ9GZT3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.59□□□□□ -1.99
SLIRPQ9GZT3 HMGN2P13-201ENST00000476476 274 ntBASIC2.59□□□□□ -1.99
SLIRPQ9GZT3 RN7SL132P-201ENST00000478131 296 ntBASIC2.59□□□□□ -1.99
SLIRPQ9GZT3 MLLT10P2-201ENST00000506434 249 ntBASIC2.59□□□□□ -1.99
SLIRPQ9GZT3 RN7SKP122-201ENST00000515923 296 ntBASIC2.59□□□□□ -1.99
SLIRPQ9GZT3 MIR2116-201ENST00000517221 80 ntBASIC2.59□□□□□ -1.99
SLIRPQ9GZT3 PAICSP4-201ENST00000517543 1253 ntBASIC2.59□□□□□ -1.99
SLIRPQ9GZT3 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.59□□□□□ -1.99
SLIRPQ9GZT3 AC090136.1-201ENST00000520009 240 ntBASIC2.59□□□□□ -1.99
SLIRPQ9GZT3 AC027309.2-201ENST00000520566 192 ntBASIC2.59□□□□□ -1.99
SLIRPQ9GZT3 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.59□□□□□ -1.99
SLIRPQ9GZT3 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.59□□□□□ -1.99
SLIRPQ9GZT3 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.59□□□□□ -1.99
SLIRPQ9GZT3 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SLIRPQ9GZT3 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.59□□□□□ -1.99
SLIRPQ9GZT3 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.59□□□□□ -1.99
SLIRPQ9GZT3 AL356575.1-201ENST00000603008 283 ntBASIC2.59□□□□□ -1.99
SLIRPQ9GZT3 AC091946.2-201ENST00000606105 291 ntBASIC2.59□□□□□ -1.99
SLIRPQ9GZT3 AC069200.1-201ENST00000609511 323 ntBASIC2.59□□□□□ -1.99
SLIRPQ9GZT3 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.59□□□□□ -1.99
SLIRPQ9GZT3 AC010297.1-201ENST00000623948 149 ntBASIC2.59□□□□□ -1.99
SLIRPQ9GZT3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
SLIRPQ9GZT3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
SLIRPQ9GZT3 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.58□□□□□ -2
SLIRPQ9GZT3 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC2.58□□□□□ -2
SLIRPQ9GZT3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.58□□□□□ -2
SLIRPQ9GZT3 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.58□□□□□ -2
SLIRPQ9GZT3 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.58□□□□□ -2
SLIRPQ9GZT3 SNORA63.3-201ENST00000362682 132 ntBASIC2.58□□□□□ -2
SLIRPQ9GZT3 RNU5B-4P-201ENST00000363508 111 ntBASIC2.58□□□□□ -2
SLIRPQ9GZT3 RNU6-236P-201ENST00000363886 106 ntBASIC2.58□□□□□ -2
SLIRPQ9GZT3 RNU6-657P-201ENST00000383904 107 ntBASIC2.58□□□□□ -2
SLIRPQ9GZT3 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
SLIRPQ9GZT3 AC063979.1-201ENST00000415539 377 ntBASIC2.58□□□□□ -2
SLIRPQ9GZT3 MTCO1P39-201ENST00000426148 480 ntBASIC2.58□□□□□ -2
SLIRPQ9GZT3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.58□□□□□ -2
SLIRPQ9GZT3 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.58□□□□□ -2
SLIRPQ9GZT3 GOT2P5-201ENST00000433995 546 ntBASIC2.58□□□□□ -2
SLIRPQ9GZT3 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.58□□□□□ -2
SLIRPQ9GZT3 AL645638.1-201ENST00000440519 361 ntBASIC2.58□□□□□ -2
SLIRPQ9GZT3 RPL23AP20-201ENST00000447965 421 ntBASIC2.58□□□□□ -2
SLIRPQ9GZT3 TPT1P12-201ENST00000448968 492 ntBASIC2.58□□□□□ -2
SLIRPQ9GZT3 AC244505.3-201ENST00000454598 187 ntBASIC2.58□□□□□ -2
SLIRPQ9GZT3 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC2.58□□□□□ -2
SLIRPQ9GZT3 AC013828.1-201ENST00000481845 158 ntBASIC2.58□□□□□ -2
SLIRPQ9GZT3 AC087190.1-201ENST00000484462 480 ntBASIC2.58□□□□□ -2
SLIRPQ9GZT3 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.58□□□□□ -2
SLIRPQ9GZT3 SNORA9.3-201ENST00000516383 129 ntBASIC2.58□□□□□ -2
SLIRPQ9GZT3 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.58□□□□□ -2
SLIRPQ9GZT3 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.58□□□□□ -2
SLIRPQ9GZT3 AC025881.1-201ENST00000518851 512 ntBASIC2.58□□□□□ -2
SLIRPQ9GZT3 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.58□□□□□ -2
SLIRPQ9GZT3 AL133271.1-201ENST00000538229 291 ntBASIC2.58□□□□□ -2
SLIRPQ9GZT3 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.58□□□□□ -2
SLIRPQ9GZT3 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.58□□□□□ -2
SLIRPQ9GZT3 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC2.58□□□□□ -2
SLIRPQ9GZT3 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.58□□□□□ -2
SLIRPQ9GZT3 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.58□□□□□ -2
SLIRPQ9GZT3 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.58□□□□□ -2
SLIRPQ9GZT3 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.58□□□□□ -2
SLIRPQ9GZT3 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC2.58□□□□□ -2
SLIRPQ9GZT3 HSPE1P5-201ENST00000561489 272 ntBASIC2.58□□□□□ -2
SLIRPQ9GZT3 FAM60BP-201ENST00000578364 658 ntBASIC2.58□□□□□ -2
SLIRPQ9GZT3 MIR5685-201ENST00000579080 79 ntBASIC2.58□□□□□ -2
SLIRPQ9GZT3 MIR4286-201ENST00000580651 93 ntBASIC2.58□□□□□ -2
SLIRPQ9GZT3 COX6CP3-201ENST00000580869 223 ntBASIC2.58□□□□□ -2
SLIRPQ9GZT3 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.58□□□□□ -2
SLIRPQ9GZT3 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC2.58□□□□□ -2
SLIRPQ9GZT3 AC092954.1-201ENST00000609121 445 ntBASIC2.58□□□□□ -2
SLIRPQ9GZT3 AC090912.3-201ENST00000609775 533 ntBASIC2.58□□□□□ -2
SLIRPQ9GZT3 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.58□□□□□ -2
SLIRPQ9GZT3 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.58□□□□□ -2
SLIRPQ9GZT3 AC009039.2-201ENST00000624524 529 ntBASIC2.58□□□□□ -2
SLIRPQ9GZT3 AC079228.1-201ENST00000624774 1049 ntBASIC2.58□□□□□ -2
SLIRPQ9GZT3 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.58□□□□□ -2
SLIRPQ9GZT3 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC2.58□□□□□ -2
SLIRPQ9GZT3 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
SLIRPQ9GZT3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.58□□□□□ -2
SLIRPQ9GZT3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.57□□□□□ -2
SLIRPQ9GZT3 AC234772.1-201ENST00000377927 937 ntBASIC2.57□□□□□ -2
SLIRPQ9GZT3 SNORD21-201ENST00000383953 95 ntBASIC2.57□□□□□ -2
SLIRPQ9GZT3 PVALB-202ENST00000404171 422 ntTSL 2 BASIC2.57□□□□□ -2
SLIRPQ9GZT3 RNU2-28P-201ENST00000410457 189 ntBASIC2.57□□□□□ -2
SLIRPQ9GZT3 RNU6-1077P-201ENST00000410506 102 ntBASIC2.57□□□□□ -2
SLIRPQ9GZT3 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.57□□□□□ -2
SLIRPQ9GZT3 RPS15AP38-201ENST00000413110 372 ntBASIC2.57□□□□□ -2
SLIRPQ9GZT3 LUZP4P1-201ENST00000415420 344 ntBASIC2.57□□□□□ -2
SLIRPQ9GZT3 RPL7P30-201ENST00000420888 709 ntBASIC2.57□□□□□ -2
SLIRPQ9GZT3 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.57□□□□□ -2
SLIRPQ9GZT3 AC016712.1-201ENST00000431088 378 ntBASIC2.57□□□□□ -2
SLIRPQ9GZT3 SNRPEP4-201ENST00000435815 279 ntBASIC2.57□□□□□ -2
SLIRPQ9GZT3 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC2.57□□□□□ -2
SLIRPQ9GZT3 AC092393.1-201ENST00000439625 742 ntBASIC2.57□□□□□ -2
SLIRPQ9GZT3 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.57□□□□□ -2
SLIRPQ9GZT3 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.57□□□□□ -2
SLIRPQ9GZT3 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.57□□□□□ -2
SLIRPQ9GZT3 AC027673.1-201ENST00000456245 405 ntBASIC2.57□□□□□ -2
SLIRPQ9GZT3 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.57□□□□□ -2
SLIRPQ9GZT3 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms