Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 AC008562.1-201ENST00000521763 330 ntBASIC3.25□□□□□ -1.89
PCDH11XQ9BZA7 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDH11XQ9BZA7 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.25□□□□□ -1.89
PCDH11XQ9BZA7 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.25□□□□□ -1.89
PCDH11XQ9BZA7 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDH11XQ9BZA7 AL355802.4-201ENST00000607635 548 ntBASIC3.25□□□□□ -1.89
PCDH11XQ9BZA7 AC090617.9-201ENST00000623751 147 ntBASIC3.25□□□□□ -1.89
PCDH11XQ9BZA7 AC117529.2-201ENST00000512159 2068 ntBASIC3.25□□□□□ -1.89
PCDH11XQ9BZA7 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
PCDH11XQ9BZA7 AP000567.1-201ENST00000406413 156 ntBASIC3.24□□□□□ -1.89
PCDH11XQ9BZA7 RN7SKP123-201ENST00000410732 291 ntBASIC3.24□□□□□ -1.89
PCDH11XQ9BZA7 RNU2-6P-201ENST00000411404 190 ntBASIC3.24□□□□□ -1.89
PCDH11XQ9BZA7 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDH11XQ9BZA7 XKRYP4-201ENST00000414395 483 ntBASIC3.24□□□□□ -1.89
PCDH11XQ9BZA7 BX276092.3-201ENST00000424182 230 ntBASIC3.24□□□□□ -1.89
PCDH11XQ9BZA7 HMGB3P12-201ENST00000438745 556 ntBASIC3.24□□□□□ -1.89
PCDH11XQ9BZA7 XKRYP5-201ENST00000449659 483 ntBASIC3.24□□□□□ -1.89
PCDH11XQ9BZA7 AC096992.1-201ENST00000459808 709 ntBASIC3.24□□□□□ -1.89
PCDH11XQ9BZA7 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.24□□□□□ -1.89
PCDH11XQ9BZA7 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.24□□□□□ -1.89
PCDH11XQ9BZA7 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDH11XQ9BZA7 AC005921.1-201ENST00000510589 286 ntBASIC3.24□□□□□ -1.89
PCDH11XQ9BZA7 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.24□□□□□ -1.89
PCDH11XQ9BZA7 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.24□□□□□ -1.89
PCDH11XQ9BZA7 OR5AK3P-201ENST00000527486 1297 ntBASIC3.24□□□□□ -1.89
PCDH11XQ9BZA7 AC010198.2-201ENST00000550612 259 ntBASIC3.24□□□□□ -1.89
PCDH11XQ9BZA7 MIR4769-201ENST00000584126 77 ntBASIC3.24□□□□□ -1.89
PCDH11XQ9BZA7 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.24□□□□□ -1.89
PCDH11XQ9BZA7 AC069304.3-201ENST00000603938 1084 ntBASIC3.24□□□□□ -1.89
PCDH11XQ9BZA7 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.24□□□□□ -1.89
PCDH11XQ9BZA7 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.24□□□□□ -1.89
PCDH11XQ9BZA7 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PCDH11XQ9BZA7 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDH11XQ9BZA7 OR5T3-201ENST00000303059 1023 ntBASIC3.23□□□□□ -1.89
PCDH11XQ9BZA7 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
PCDH11XQ9BZA7 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDH11XQ9BZA7 FAM103A2P-201ENST00000444122 354 ntBASIC3.23□□□□□ -1.89
PCDH11XQ9BZA7 MRPL50P4-201ENST00000446432 475 ntBASIC3.23□□□□□ -1.89
PCDH11XQ9BZA7 AL353705.4-201ENST00000449661 238 ntBASIC3.23□□□□□ -1.89
PCDH11XQ9BZA7 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PCDH11XQ9BZA7 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.23□□□□□ -1.89
PCDH11XQ9BZA7 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDH11XQ9BZA7 AC004923.2-201ENST00000529649 369 ntBASIC3.23□□□□□ -1.89
PCDH11XQ9BZA7 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDH11XQ9BZA7 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDH11XQ9BZA7 AC090751.1-201ENST00000566966 267 ntBASIC3.23□□□□□ -1.89
PCDH11XQ9BZA7 MIR4506-201ENST00000584693 77 ntBASIC3.23□□□□□ -1.89
PCDH11XQ9BZA7 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.23□□□□□ -1.89
PCDH11XQ9BZA7 AC010620.2-201ENST00000600135 313 ntBASIC3.23□□□□□ -1.89
PCDH11XQ9BZA7 AC011468.4-201ENST00000603942 409 ntBASIC3.23□□□□□ -1.89
PCDH11XQ9BZA7 AP003117.2-201ENST00000606010 545 ntBASIC3.23□□□□□ -1.89
PCDH11XQ9BZA7 AC104307.1-201ENST00000616142 196 ntBASIC3.23□□□□□ -1.89
PCDH11XQ9BZA7 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
PCDH11XQ9BZA7 AC084035.1-201ENST00000634543 607 ntBASIC3.23□□□□□ -1.89
PCDH11XQ9BZA7 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDH11XQ9BZA7 ZNF33CP-201ENST00000432492 2030 ntBASIC3.23□□□□□ -1.89
PCDH11XQ9BZA7 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDH11XQ9BZA7 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDH11XQ9BZA7 AC016717.2-201ENST00000609089 5141 ntBASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 SNORD114-30-201ENST00000364448 72 ntBASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 RNU1-73P-201ENST00000383971 164 ntBASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 NPM1P10-201ENST00000398310 865 ntBASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 VTA1P1-201ENST00000414044 866 ntBASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 RPL31P45-201ENST00000419532 356 ntBASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 ELOCP6-201ENST00000429066 328 ntBASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 AC104389.3-201ENST00000445629 235 ntBASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 RPL23AP23-201ENST00000452590 471 ntBASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 ELOCP12-201ENST00000458706 328 ntBASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 AC089999.1-201ENST00000460336 374 ntBASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 RPL21P103-201ENST00000479921 488 ntBASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 AC006483.1-201ENST00000487308 313 ntBASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 AC110792.2-201ENST00000510278 224 ntBASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 AC074029.1-201ENST00000552531 1044 ntBASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 AC004775.1-201ENST00000607389 753 ntBASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 AC018754.1-201ENST00000607486 925 ntBASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 AL451074.6-201ENST00000608512 729 ntBASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 AC105429.2-201ENST00000610567 517 ntBASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 MIR6864-201ENST00000617935 70 ntBASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 AC068722.2-201ENST00000618734 544 ntBASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 AC110774.1-201ENST00000623567 2018 ntBASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PCDH11XQ9BZA7 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.21□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms