Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 U3.39-201ENST00000408569 239 ntBASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 RNU4-78P-201ENST00000410940 126 ntBASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 EIF4EP2-201ENST00000422816 654 ntBASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 AC087650.1-201ENST00000431445 468 ntBASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 AL353597.2-202ENST00000434901 373 ntBASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 CEACAMP6-201ENST00000452007 574 ntBASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 RPS23P6-201ENST00000466136 431 ntBASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 RN7SL269P-201ENST00000467795 305 ntBASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 AC087385.1-201ENST00000475062 312 ntBASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 RN7SL583P-201ENST00000475692 287 ntBASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 RPS24P16-201ENST00000497294 392 ntBASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 AF186190.1-201ENST00000517470 480 ntBASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 AC109446.1-201ENST00000566172 220 ntBASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 AC106785.4-201ENST00000569492 412 ntBASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 AC005341.1-201ENST00000571086 708 ntBASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 MIR3934-201ENST00000579806 107 ntBASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 COX6CP3-201ENST00000580869 223 ntBASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 RPS29P30-201ENST00000600975 111 ntBASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 U2.17-201ENST00000611454 95 ntBASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 MIR4679-1-201ENST00000637619 75 ntBASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 PROS2P-201ENST00000474651 1951 ntBASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 AC009120.2-204ENST00000621548 2032 ntBASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 TTC41P-205ENST00000551270 3963 ntBASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CNTNAP3Q9BZ76 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.71□□□□□ -1.49
CNTNAP3Q9BZ76 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
CNTNAP3Q9BZ76 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CNTNAP3Q9BZ76 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CNTNAP3Q9BZ76 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CNTNAP3Q9BZ76 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 AC005224.3-201ENST00000584683 2140 ntBASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 RNA5SP65-201ENST00000363166 119 ntBASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 RNU6-47P-201ENST00000383866 107 ntBASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 MIR19A-201ENST00000384878 82 ntBASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 MIR192-201ENST00000384915 110 ntBASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 RNU6-278P-201ENST00000390945 109 ntBASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 SNORA53-201ENST00000391141 249 ntBASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 HMGN1P24-201ENST00000412282 298 ntBASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 BX276092.3-201ENST00000424182 230 ntBASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 FHP1-201ENST00000442741 703 ntBASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 BTF3P6-201ENST00000448054 499 ntBASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 RPL23AP31-201ENST00000456160 467 ntBASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 RPL21P8-201ENST00000465083 535 ntBASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 AC068305.1-201ENST00000497406 726 ntBASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 RNU6-615P-201ENST00000516065 106 ntBASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 RNU6-347P-201ENST00000516658 105 ntBASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 RNU6-323P-201ENST00000521915 107 ntBASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 AC012339.2-201ENST00000523996 453 ntBASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 AL078605.1-201ENST00000603529 500 ntBASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 AL451044.1-201ENST00000604867 238 ntBASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 AL353662.3-201ENST00000625131 237 ntBASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 NXPH1-205ENST00000602349 1953 ntBASIC5.71□□□□□ -1.5
CNTNAP3Q9BZ76 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 AC010329.2-201ENST00000595195 2737 ntBASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 AC103710.2-202ENST00000641454 2853 ntBASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 AL731556.1-201ENST00000394628 3711 ntBASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
CNTNAP3Q9BZ76 Y_RNA.76-201ENST00000362931 109 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms