Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.35□□□□□ -1.87
SCAPERQ9BY12 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.34□□□□□ -1.87
SCAPERQ9BY12 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.34□□□□□ -1.87
SCAPERQ9BY12 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.34□□□□□ -1.87
SCAPERQ9BY12 AL359893.1-201ENST00000447628 1580 ntBASIC3.34□□□□□ -1.87
SCAPERQ9BY12 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.34□□□□□ -1.88
SCAPERQ9BY12 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.34□□□□□ -1.88
SCAPERQ9BY12 RPL38P4-201ENST00000502376 214 ntBASIC3.34□□□□□ -1.88
SCAPERQ9BY12 AC091917.2-201ENST00000505002 744 ntBASIC3.34□□□□□ -1.88
SCAPERQ9BY12 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.34□□□□□ -1.88
SCAPERQ9BY12 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.34□□□□□ -1.88
SCAPERQ9BY12 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.34□□□□□ -1.88
SCAPERQ9BY12 AC245517.5-201ENST00000611529 162 ntBASIC3.34□□□□□ -1.88
SCAPERQ9BY12 AC000123.2-201ENST00000623124 461 ntBASIC3.34□□□□□ -1.88
SCAPERQ9BY12 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.33□□□□□ -1.88
SCAPERQ9BY12 AL161431.1-201ENST00000618966 4205 ntBASIC3.33□□□□□ -1.88
SCAPERQ9BY12 AC006378.2-201ENST00000623178 2476 ntBASIC3.33□□□□□ -1.88
SCAPERQ9BY12 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC3.33□□□□□ -1.88
SCAPERQ9BY12 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.33□□□□□ -1.88
SCAPERQ9BY12 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
SCAPERQ9BY12 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.33□□□□□ -1.88
SCAPERQ9BY12 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SCAPERQ9BY12 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SCAPERQ9BY12 MIR21-201ENST00000362134 72 ntBASIC3.33□□□□□ -1.88
SCAPERQ9BY12 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SCAPERQ9BY12 FAM92A1P2-202ENST00000504766 877 ntBASIC3.33□□□□□ -1.88
SCAPERQ9BY12 RN7SKP31-201ENST00000516354 278 ntBASIC3.33□□□□□ -1.88
SCAPERQ9BY12 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.33□□□□□ -1.88
SCAPERQ9BY12 TRAV11-201ENST00000539512 339 ntBASIC3.33□□□□□ -1.88
SCAPERQ9BY12 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SCAPERQ9BY12 MIR6073-201ENST00000352083 89 ntBASIC3.32□□□□□ -1.88
SCAPERQ9BY12 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.32□□□□□ -1.88
SCAPERQ9BY12 DEFA7P-201ENST00000382676 285 ntBASIC3.32□□□□□ -1.88
SCAPERQ9BY12 RPL23AP36-201ENST00000413895 458 ntBASIC3.32□□□□□ -1.88
SCAPERQ9BY12 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.32□□□□□ -1.88
SCAPERQ9BY12 RPS24P8-201ENST00000431490 402 ntBASIC3.32□□□□□ -1.88
SCAPERQ9BY12 AC093392.2-201ENST00000450682 337 ntBASIC3.32□□□□□ -1.88
SCAPERQ9BY12 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.32□□□□□ -1.88
SCAPERQ9BY12 AP000926.3-201ENST00000497201 299 ntBASIC3.32□□□□□ -1.88
SCAPERQ9BY12 RPS27P27-201ENST00000498779 255 ntBASIC3.32□□□□□ -1.88
SCAPERQ9BY12 AC098799.2-201ENST00000509466 868 ntBASIC3.32□□□□□ -1.88
SCAPERQ9BY12 RNA5SP200-201ENST00000516360 103 ntBASIC3.32□□□□□ -1.88
SCAPERQ9BY12 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SCAPERQ9BY12 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.32□□□□□ -1.88
SCAPERQ9BY12 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
SCAPERQ9BY12 AP000787.2-201ENST00000604432 568 ntBASIC3.32□□□□□ -1.88
SCAPERQ9BY12 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
SCAPERQ9BY12 AL356266.1-201ENST00000623311 483 ntBASIC3.32□□□□□ -1.88
SCAPERQ9BY12 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SCAPERQ9BY12 NSRP1P1-201ENST00000444067 1693 ntBASIC3.32□□□□□ -1.88
SCAPERQ9BY12 DCAF13P3-201ENST00000561147 1334 ntBASIC3.31□□□□□ -1.88
SCAPERQ9BY12 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SCAPERQ9BY12 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SCAPERQ9BY12 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.31□□□□□ -1.88
SCAPERQ9BY12 RPL7P54-201ENST00000438336 674 ntBASIC3.31□□□□□ -1.88
SCAPERQ9BY12 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.31□□□□□ -1.88
SCAPERQ9BY12 AC027673.1-201ENST00000456245 405 ntBASIC3.31□□□□□ -1.88
SCAPERQ9BY12 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC3.31□□□□□ -1.88
SCAPERQ9BY12 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.31□□□□□ -1.88
SCAPERQ9BY12 AC090071.1-201ENST00000507713 644 ntBASIC3.31□□□□□ -1.88
SCAPERQ9BY12 AP003467.2-201ENST00000520175 319 ntBASIC3.31□□□□□ -1.88
SCAPERQ9BY12 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.31□□□□□ -1.88
SCAPERQ9BY12 AL160237.3-201ENST00000604114 1013 ntBASIC3.31□□□□□ -1.88
SCAPERQ9BY12 AP003117.2-201ENST00000606010 545 ntBASIC3.31□□□□□ -1.88
SCAPERQ9BY12 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3.31□□□□□ -1.88
SCAPERQ9BY12 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
SCAPERQ9BY12 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.31□□□□□ -1.88
SCAPERQ9BY12 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.3□□□□□ -1.88
SCAPERQ9BY12 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.3□□□□□ -1.88
SCAPERQ9BY12 AL445646.1-201ENST00000431784 216 ntBASIC3.3□□□□□ -1.88
SCAPERQ9BY12 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.3□□□□□ -1.88
SCAPERQ9BY12 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.3□□□□□ -1.88
SCAPERQ9BY12 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.3□□□□□ -1.88
SCAPERQ9BY12 AK6P1-201ENST00000540219 478 ntBASIC3.3□□□□□ -1.88
SCAPERQ9BY12 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.3□□□□□ -1.88
SCAPERQ9BY12 AP001521.1-201ENST00000609150 300 ntBASIC3.3□□□□□ -1.88
SCAPERQ9BY12 AC009831.4-201ENST00000620744 325 ntBASIC3.3□□□□□ -1.88
SCAPERQ9BY12 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SCAPERQ9BY12 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SCAPERQ9BY12 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.3□□□□□ -1.88
SCAPERQ9BY12 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
SCAPERQ9BY12 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.3□□□□□ -1.88
SCAPERQ9BY12 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SCAPERQ9BY12 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SCAPERQ9BY12 SNORA17.3-201ENST00000391159 129 ntBASIC3.29□□□□□ -1.88
SCAPERQ9BY12 HMGB1P13-201ENST00000406019 642 ntBASIC3.29□□□□□ -1.88
SCAPERQ9BY12 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.29□□□□□ -1.88
SCAPERQ9BY12 PTP4A1P1-201ENST00000420539 515 ntBASIC3.29□□□□□ -1.88
SCAPERQ9BY12 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.29□□□□□ -1.88
SCAPERQ9BY12 AC073310.1-201ENST00000423226 1033 ntBASIC3.29□□□□□ -1.88
SCAPERQ9BY12 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.29□□□□□ -1.88
SCAPERQ9BY12 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.29□□□□□ -1.88
SCAPERQ9BY12 HSPE1P28-201ENST00000443139 211 ntBASIC3.29□□□□□ -1.88
SCAPERQ9BY12 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.29□□□□□ -1.88
SCAPERQ9BY12 RSL24D1P2-201ENST00000445584 366 ntBASIC3.29□□□□□ -1.88
SCAPERQ9BY12 AC132942.1-201ENST00000486753 483 ntBASIC3.29□□□□□ -1.88
SCAPERQ9BY12 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.29□□□□□ -1.88
SCAPERQ9BY12 MTND5P4-201ENST00000514978 288 ntBASIC3.29□□□□□ -1.88
SCAPERQ9BY12 RNU6ATAC9P-201ENST00000516210 116 ntBASIC3.29□□□□□ -1.88
SCAPERQ9BY12 AC025881.1-201ENST00000518851 512 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms