Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 Y_RNA.256-201ENST00000364594 104 ntBASIC4.67□□□□□ -1.66
SALL3Q9BXA9 SNORA51.12-201ENST00000384448 134 ntBASIC4.67□□□□□ -1.66
SALL3Q9BXA9 SNORD115-47-201ENST00000391226 86 ntBASIC4.67□□□□□ -1.66
SALL3Q9BXA9 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SALL3Q9BXA9 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.67□□□□□ -1.66
SALL3Q9BXA9 HMGB3P23-201ENST00000414981 585 ntBASIC4.67□□□□□ -1.66
SALL3Q9BXA9 MTCYBP24-201ENST00000420387 1106 ntBASIC4.67□□□□□ -1.66
SALL3Q9BXA9 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.67□□□□□ -1.66
SALL3Q9BXA9 OR4F13P-201ENST00000428478 931 ntBASIC4.67□□□□□ -1.66
SALL3Q9BXA9 TIMM9P3-201ENST00000428659 274 ntBASIC4.67□□□□□ -1.66
SALL3Q9BXA9 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.67□□□□□ -1.66
SALL3Q9BXA9 AL031663.1-201ENST00000437445 219 ntBASIC4.67□□□□□ -1.66
SALL3Q9BXA9 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.67□□□□□ -1.66
SALL3Q9BXA9 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.67□□□□□ -1.66
SALL3Q9BXA9 AC244505.5-201ENST00000443639 207 ntBASIC4.67□□□□□ -1.66
SALL3Q9BXA9 HMGB1P28-201ENST00000507778 552 ntBASIC4.67□□□□□ -1.66
SALL3Q9BXA9 AC010342.1-201ENST00000514047 877 ntBASIC4.67□□□□□ -1.66
SALL3Q9BXA9 RNA5SP216-201ENST00000516111 123 ntBASIC4.67□□□□□ -1.66
SALL3Q9BXA9 OR4A12P-201ENST00000530847 918 ntBASIC4.67□□□□□ -1.66
SALL3Q9BXA9 OR8R1P-201ENST00000543943 764 ntBASIC4.67□□□□□ -1.66
SALL3Q9BXA9 OR6C73P-201ENST00000546432 358 ntBASIC4.67□□□□□ -1.66
SALL3Q9BXA9 AC004217.3-201ENST00000551552 878 ntBASIC4.67□□□□□ -1.66
SALL3Q9BXA9 TRAV15-201ENST00000556680 249 ntBASIC4.67□□□□□ -1.66
SALL3Q9BXA9 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.67□□□□□ -1.66
SALL3Q9BXA9 FGF7P1-201ENST00000582820 288 ntBASIC4.67□□□□□ -1.66
SALL3Q9BXA9 AC006504.3-201ENST00000586818 523 ntBASIC4.67□□□□□ -1.66
SALL3Q9BXA9 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.67□□□□□ -1.66
SALL3Q9BXA9 AC063943.3-201ENST00000615562 356 ntBASIC4.67□□□□□ -1.66
SALL3Q9BXA9 MIR6875-201ENST00000617506 72 ntBASIC4.67□□□□□ -1.66
SALL3Q9BXA9 AC079228.1-201ENST00000624774 1049 ntBASIC4.67□□□□□ -1.66
SALL3Q9BXA9 AL157786.1-207ENST00000627771 695 ntBASIC4.67□□□□□ -1.66
SALL3Q9BXA9 MIR3688-2-201ENST00000636963 87 ntBASIC4.67□□□□□ -1.66
SALL3Q9BXA9 LRRC77P-213ENST00000637727 880 ntBASIC4.67□□□□□ -1.66
SALL3Q9BXA9 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SALL3Q9BXA9 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.66□□□□□ -1.66
SALL3Q9BXA9 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SALL3Q9BXA9 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
SALL3Q9BXA9 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SALL3Q9BXA9 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SALL3Q9BXA9 RNU6-462P-201ENST00000362659 105 ntBASIC4.66□□□□□ -1.66
SALL3Q9BXA9 RNU6-492P-201ENST00000363035 104 ntBASIC4.66□□□□□ -1.66
SALL3Q9BXA9 RNU6-216P-201ENST00000363282 104 ntBASIC4.66□□□□□ -1.66
SALL3Q9BXA9 AC073136.2-201ENST00000417282 849 ntBASIC4.66□□□□□ -1.66
SALL3Q9BXA9 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.66□□□□□ -1.66
SALL3Q9BXA9 RPL7P4-203ENST00000430239 730 ntBASIC4.66□□□□□ -1.66
SALL3Q9BXA9 HMGB1P31-201ENST00000437242 427 ntBASIC4.66□□□□□ -1.66
SALL3Q9BXA9 UBE2V1P5-201ENST00000440070 405 ntBASIC4.66□□□□□ -1.66
SALL3Q9BXA9 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.66□□□□□ -1.66
SALL3Q9BXA9 RPL21P11-201ENST00000461458 483 ntBASIC4.66□□□□□ -1.66
SALL3Q9BXA9 RN7SL93P-201ENST00000463035 293 ntBASIC4.66□□□□□ -1.66
SALL3Q9BXA9 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.66□□□□□ -1.66
SALL3Q9BXA9 OR4R3P-201ENST00000525084 838 ntBASIC4.66□□□□□ -1.66
SALL3Q9BXA9 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SALL3Q9BXA9 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.66□□□□□ -1.66
SALL3Q9BXA9 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.66□□□□□ -1.66
SALL3Q9BXA9 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.66□□□□□ -1.66
SALL3Q9BXA9 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.66□□□□□ -1.66
SALL3Q9BXA9 AC053481.4-201ENST00000583164 216 ntBASIC4.66□□□□□ -1.66
SALL3Q9BXA9 MIR7973-1-201ENST00000614683 76 ntBASIC4.66□□□□□ -1.66
SALL3Q9BXA9 AC108479.2-201ENST00000617314 601 ntBASIC4.66□□□□□ -1.66
SALL3Q9BXA9 AC012150.2-201ENST00000621300 544 ntBASIC4.66□□□□□ -1.66
SALL3Q9BXA9 AC138649.3-201ENST00000622154 254 ntBASIC4.66□□□□□ -1.66
SALL3Q9BXA9 AC116563.2-201ENST00000624751 535 ntBASIC4.66□□□□□ -1.66
SALL3Q9BXA9 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
SALL3Q9BXA9 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
SALL3Q9BXA9 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.65□□□□□ -1.66
SALL3Q9BXA9 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
SALL3Q9BXA9 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.65□□□□□ -1.66
SALL3Q9BXA9 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
SALL3Q9BXA9 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SALL3Q9BXA9 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SALL3Q9BXA9 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.65□□□□□ -1.67
SALL3Q9BXA9 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SALL3Q9BXA9 OR5BR1P-201ENST00000524992 1330 ntBASIC4.65□□□□□ -1.67
SALL3Q9BXA9 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SALL3Q9BXA9 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SALL3Q9BXA9 RNU4-12P-201ENST00000365233 139 ntBASIC4.65□□□□□ -1.67
SALL3Q9BXA9 RNU6-723P-201ENST00000383973 107 ntBASIC4.65□□□□□ -1.67
SALL3Q9BXA9 Y_RNA.450-201ENST00000384198 113 ntBASIC4.65□□□□□ -1.67
SALL3Q9BXA9 RNU1-89P-201ENST00000384592 164 ntBASIC4.65□□□□□ -1.67
SALL3Q9BXA9 RNU6-297P-201ENST00000384636 107 ntBASIC4.65□□□□□ -1.67
SALL3Q9BXA9 SNORD116-23-201ENST00000384645 92 ntBASIC4.65□□□□□ -1.67
SALL3Q9BXA9 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
SALL3Q9BXA9 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
SALL3Q9BXA9 AL590002.1-201ENST00000406554 418 ntBASIC4.65□□□□□ -1.67
SALL3Q9BXA9 USP9YP13-201ENST00000417797 480 ntBASIC4.65□□□□□ -1.67
SALL3Q9BXA9 AIMP1P1-201ENST00000418670 937 ntBASIC4.65□□□□□ -1.67
SALL3Q9BXA9 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.65□□□□□ -1.67
SALL3Q9BXA9 OFD1P18Y-201ENST00000420889 959 ntBASIC4.65□□□□□ -1.67
SALL3Q9BXA9 AC012498.1-201ENST00000424037 437 ntBASIC4.65□□□□□ -1.67
SALL3Q9BXA9 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SALL3Q9BXA9 AC073069.1-201ENST00000428657 441 ntBASIC4.65□□□□□ -1.67
SALL3Q9BXA9 AL831737.1-201ENST00000441288 271 ntBASIC4.65□□□□□ -1.67
SALL3Q9BXA9 RPS7P5-201ENST00000441482 581 ntBASIC4.65□□□□□ -1.67
SALL3Q9BXA9 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.65□□□□□ -1.67
SALL3Q9BXA9 AL359073.1-201ENST00000448036 403 ntBASIC4.65□□□□□ -1.67
SALL3Q9BXA9 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.65□□□□□ -1.67
SALL3Q9BXA9 NANOGP10-201ENST00000453325 895 ntBASIC4.65□□□□□ -1.67
SALL3Q9BXA9 RPL18AP17-201ENST00000455326 198 ntBASIC4.65□□□□□ -1.67
SALL3Q9BXA9 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms