Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 AC022968.1-201ENST00000567372 442 ntBASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 AC012417.1-201ENST00000582307 1039 ntBASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 AC068313.1-201ENST00000604028 1008 ntBASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 AL034351.1-201ENST00000605288 668 ntBASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 AC091965.4-201ENST00000607691 587 ntBASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 AC078883.4-201ENST00000623218 367 ntBASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 AL159972.1-201ENST00000625150 448 ntBASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 AC092125.1-201ENST00000562568 1995 ntBASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HERPUD2Q9BSE4 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 PRO1804-201ENST00000623780 2050 ntBASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 DEFB108F-201ENST00000344638 222 ntBASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 RNA5SP513-201ENST00000364648 118 ntBASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 SNORD6-201ENST00000365444 73 ntBASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 U8.14-201ENST00000390843 143 ntBASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 TPMTP3-201ENST00000411928 735 ntBASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 HSFY4P-201ENST00000415994 1181 ntBASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 RPS27AP14-201ENST00000422868 454 ntBASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 MTATP6P4-201ENST00000427725 675 ntBASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 RPL37P21-201ENST00000435890 276 ntBASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 SNORA71B-202ENST00000439232 272 ntBASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 RPL36AP13-201ENST00000457490 317 ntBASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 AC103987.1-201ENST00000473394 348 ntBASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 AC068305.1-201ENST00000497406 726 ntBASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 AC111000.2-201ENST00000507775 550 ntBASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 RNU6-798P-201ENST00000516912 103 ntBASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 DEFB108D-201ENST00000527787 222 ntBASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 AC090888.1-201ENST00000561335 1141 ntBASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 RN7SL600P-201ENST00000581811 299 ntBASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 MIR5684-201ENST00000585074 65 ntBASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 AC025946.2-201ENST00000603398 234 ntBASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 AC104662.1-201ENST00000604448 511 ntBASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 AC106900.2-201ENST00000604994 317 ntBASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HERPUD2Q9BSE4 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.73
HERPUD2Q9BSE4 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.73
HERPUD2Q9BSE4 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 RNY4P24-201ENST00000362735 96 ntBASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 RNU5F-7P-201ENST00000363696 115 ntBASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 RNY3P9-201ENST00000384727 106 ntBASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 LAP3P1-201ENST00000403648 294 ntBASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 AP000567.1-201ENST00000406413 156 ntBASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 RNU6-920P-201ENST00000410926 92 ntBASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 YPEL5P1-201ENST00000419731 367 ntBASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 RPL21P32-201ENST00000419877 477 ntBASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 AC090774.1-201ENST00000435925 246 ntBASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 RPL35AP22-201ENST00000436855 335 ntBASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 PPIAP15-201ENST00000479662 484 ntBASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 RPS3AP50-201ENST00000487064 803 ntBASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 AC116347.2-201ENST00000514912 523 ntBASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 SNORA31.9-201ENST00000516429 84 ntBASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 AC008489.1-201ENST00000524271 483 ntBASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 CYCSP29-201ENST00000533731 318 ntBASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms