Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 SCARNA16.3-201ENST00000516595 184 ntBASIC2.1□□□□□ -2.07
CFAP54Q96N23 RNA5SP102-201ENST00000516865 106 ntBASIC2.1□□□□□ -2.07
CFAP54Q96N23 AC091515.1-201ENST00000548110 679 ntBASIC2.1□□□□□ -2.07
CFAP54Q96N23 MIR5007-201ENST00000583098 95 ntBASIC2.1□□□□□ -2.07
CFAP54Q96N23 AL356266.1-201ENST00000623311 483 ntBASIC2.1□□□□□ -2.07
CFAP54Q96N23 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC2.1□□□□□ -2.07
CFAP54Q96N23 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.1□□□□□ -2.07
CFAP54Q96N23 SNORA25.6-201ENST00000364121 118 ntBASIC2.1□□□□□ -2.07
CFAP54Q96N23 RNU4-74P-201ENST00000411280 161 ntBASIC2.1□□□□□ -2.07
CFAP54Q96N23 MTATP6P11-201ENST00000428071 670 ntBASIC2.1□□□□□ -2.07
CFAP54Q96N23 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.1□□□□□ -2.07
CFAP54Q96N23 RNU1-123P-201ENST00000458950 160 ntBASIC2.1□□□□□ -2.07
CFAP54Q96N23 AC147055.1-201ENST00000509261 750 ntBASIC2.1□□□□□ -2.07
CFAP54Q96N23 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.1□□□□□ -2.07
CFAP54Q96N23 MIR5092-201ENST00000583139 88 ntBASIC2.1□□□□□ -2.07
CFAP54Q96N23 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.1□□□□□ -2.07
CFAP54Q96N23 FRG1DP-201ENST00000635586 771 ntBASIC2.1□□□□□ -2.07
CFAP54Q96N23 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.1□□□□□ -2.07
CFAP54Q96N23 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
CFAP54Q96N23 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
CFAP54Q96N23 AC008432.1-201ENST00000615912 1320 ntBASIC2.09□□□□□ -2.07
CFAP54Q96N23 AL445437.1-201ENST00000623157 3087 ntBASIC2.09□□□□□ -2.07
CFAP54Q96N23 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
CFAP54Q96N23 AL354719.1-201ENST00000406535 843 ntBASIC2.09□□□□□ -2.07
CFAP54Q96N23 AL118520.1-201ENST00000450770 291 ntBASIC2.09□□□□□ -2.07
CFAP54Q96N23 RN7SL297P-201ENST00000483161 293 ntBASIC2.09□□□□□ -2.07
CFAP54Q96N23 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.09□□□□□ -2.07
CFAP54Q96N23 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC2.09□□□□□ -2.07
CFAP54Q96N23 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.09□□□□□ -2.07
CFAP54Q96N23 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CFAP54Q96N23 AC012360.2-201ENST00000609349 391 ntBASIC2.09□□□□□ -2.07
CFAP54Q96N23 AC091834.1-201ENST00000614543 472 ntBASIC2.09□□□□□ -2.07
CFAP54Q96N23 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
CFAP54Q96N23 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.09□□□□□ -2.07
CFAP54Q96N23 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CFAP54Q96N23 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CFAP54Q96N23 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CFAP54Q96N23 MIR625-201ENST00000385047 85 ntBASIC2.09□□□□□ -2.07
CFAP54Q96N23 RPL23AP63-201ENST00000498752 471 ntBASIC2.09□□□□□ -2.07
CFAP54Q96N23 AC123904.3-201ENST00000547218 814 ntBASIC2.09□□□□□ -2.07
CFAP54Q96N23 MIR5002-201ENST00000584713 97 ntBASIC2.09□□□□□ -2.07
CFAP54Q96N23 AL451049.1-201ENST00000608672 497 ntBASIC2.09□□□□□ -2.07
CFAP54Q96N23 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.09□□□□□ -2.08
CFAP54Q96N23 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
CFAP54Q96N23 RNA5SP502-201ENST00000362694 119 ntBASIC2.09□□□□□ -2.08
CFAP54Q96N23 SNORA67.5-201ENST00000391036 107 ntBASIC2.09□□□□□ -2.08
CFAP54Q96N23 AC011604.1-201ENST00000545978 196 ntBASIC2.09□□□□□ -2.08
CFAP54Q96N23 AL451074.6-201ENST00000608512 729 ntBASIC2.09□□□□□ -2.08
CFAP54Q96N23 Z99129.2-201ENST00000619967 314 ntBASIC2.09□□□□□ -2.08
CFAP54Q96N23 AL139811.1-201ENST00000424779 2299 ntBASIC2.08□□□□□ -2.08
CFAP54Q96N23 MTND5P35-201ENST00000557537 1720 ntBASIC2.08□□□□□ -2.08
CFAP54Q96N23 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.08□□□□□ -2.08
CFAP54Q96N23 MTND6P18-201ENST00000439477 513 ntBASIC2.08□□□□□ -2.08
CFAP54Q96N23 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC2.08□□□□□ -2.08
CFAP54Q96N23 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.08□□□□□ -2.08
CFAP54Q96N23 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
CFAP54Q96N23 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CFAP54Q96N23 Y_RNA.30-201ENST00000362572 97 ntBASIC2.08□□□□□ -2.08
CFAP54Q96N23 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.08□□□□□ -2.08
CFAP54Q96N23 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.08□□□□□ -2.08
CFAP54Q96N23 RNA5SP200-201ENST00000516360 103 ntBASIC2.08□□□□□ -2.08
CFAP54Q96N23 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.08□□□□□ -2.08
CFAP54Q96N23 AL356280.1-201ENST00000603614 379 ntBASIC2.08□□□□□ -2.08
CFAP54Q96N23 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC2.08□□□□□ -2.08
CFAP54Q96N23 MTND5P3-201ENST00000438536 1800 ntBASIC2.08□□□□□ -2.08
CFAP54Q96N23 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.08□□□□□ -2.08
CFAP54Q96N23 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
CFAP54Q96N23 AL355578.1-201ENST00000607405 1328 ntBASIC2.07□□□□□ -2.08
CFAP54Q96N23 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CFAP54Q96N23 MIR708-201ENST00000390708 88 ntBASIC2.07□□□□□ -2.08
CFAP54Q96N23 RNA5SP129-201ENST00000410276 118 ntBASIC2.07□□□□□ -2.08
CFAP54Q96N23 SNRPFP4-201ENST00000456366 242 ntBASIC2.07□□□□□ -2.08
CFAP54Q96N23 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.07□□□□□ -2.08
CFAP54Q96N23 AMZ2P1-203ENST00000565833 850 ntBASIC2.07□□□□□ -2.08
CFAP54Q96N23 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.07□□□□□ -2.08
CFAP54Q96N23 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
CFAP54Q96N23 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CFAP54Q96N23 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CFAP54Q96N23 AC092427.1-202ENST00000430569 476 ntBASIC2.07□□□□□ -2.08
CFAP54Q96N23 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.07□□□□□ -2.08
CFAP54Q96N23 AC092155.2-201ENST00000454675 477 ntBASIC2.07□□□□□ -2.08
CFAP54Q96N23 OR4H12P-201ENST00000556269 907 ntBASIC2.07□□□□□ -2.08
CFAP54Q96N23 MIR21-201ENST00000362134 72 ntBASIC2.06□□□□□ -2.08
CFAP54Q96N23 NCSTNP1-201ENST00000406229 144 ntBASIC2.06□□□□□ -2.08
CFAP54Q96N23 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.06□□□□□ -2.08
CFAP54Q96N23 NAMPTP2-201ENST00000505629 1115 ntBASIC2.06□□□□□ -2.08
CFAP54Q96N23 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.06□□□□□ -2.08
CFAP54Q96N23 KPNA2P1-201ENST00000458289 1591 ntBASIC2.06□□□□□ -2.08
CFAP54Q96N23 AC093909.5-201ENST00000621839 1799 ntBASIC2.06□□□□□ -2.08
CFAP54Q96N23 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.06□□□□□ -2.08
CFAP54Q96N23 EI24P1-201ENST00000416584 867 ntBASIC2.06□□□□□ -2.08
CFAP54Q96N23 ATG3P1-201ENST00000419507 911 ntBASIC2.06□□□□□ -2.08
CFAP54Q96N23 AL390023.1-201ENST00000428836 262 ntBASIC2.06□□□□□ -2.08
CFAP54Q96N23 AC125238.1-201ENST00000448842 249 ntBASIC2.06□□□□□ -2.08
CFAP54Q96N23 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.06□□□□□ -2.08
CFAP54Q96N23 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.06□□□□□ -2.08
CFAP54Q96N23 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.06□□□□□ -2.08
CFAP54Q96N23 AL021407.1-201ENST00000404531 386 ntBASIC2.06□□□□□ -2.08
CFAP54Q96N23 AL590762.3-201ENST00000436372 640 ntBASIC2.06□□□□□ -2.08
CFAP54Q96N23 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms