Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AP004247.1-201ENST00000531556 1289 ntBASIC4.49□□□□□ -1.69
SNX27Q96L92 AC013828.2-201ENST00000532487 235 ntBASIC4.49□□□□□ -1.69
SNX27Q96L92 AC068587.4-201ENST00000533893 186 ntBASIC4.49□□□□□ -1.69
SNX27Q96L92 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.49□□□□□ -1.69
SNX27Q96L92 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.49□□□□□ -1.69
SNX27Q96L92 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.49□□□□□ -1.69
SNX27Q96L92 OR6C7P-201ENST00000547875 934 ntBASIC4.49□□□□□ -1.69
SNX27Q96L92 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.49□□□□□ -1.69
SNX27Q96L92 CENPUP2-201ENST00000555897 1186 ntBASIC4.49□□□□□ -1.69
SNX27Q96L92 AC090186.1-201ENST00000605991 572 ntBASIC4.49□□□□□ -1.69
SNX27Q96L92 RNU4-89P-201ENST00000607443 133 ntBASIC4.49□□□□□ -1.69
SNX27Q96L92 AL357080.1-201ENST00000617394 239 ntBASIC4.49□□□□□ -1.69
SNX27Q96L92 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.49□□□□□ -1.69
SNX27Q96L92 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.49□□□□□ -1.69
SNX27Q96L92 MIR7154-201ENST00000620673 73 ntBASIC4.49□□□□□ -1.69
SNX27Q96L92 AP006248.2-201ENST00000623309 592 ntBASIC4.49□□□□□ -1.69
SNX27Q96L92 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SNX27Q96L92 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SNX27Q96L92 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.49□□□□□ -1.69
SNX27Q96L92 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SNX27Q96L92 NUP58P1-201ENST00000502546 1738 ntBASIC4.49□□□□□ -1.69
SNX27Q96L92 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
SNX27Q96L92 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.49□□□□□ -1.69
SNX27Q96L92 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
SNX27Q96L92 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SNX27Q96L92 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SNX27Q96L92 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SNX27Q96L92 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
SNX27Q96L92 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SNX27Q96L92 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
SNX27Q96L92 PABPC1P7-201ENST00000413177 1513 ntBASIC4.48□□□□□ -1.69
SNX27Q96L92 RIOK3P1-201ENST00000418778 1528 ntBASIC4.48□□□□□ -1.69
SNX27Q96L92 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
SNX27Q96L92 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.48□□□□□ -1.69
SNX27Q96L92 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
SNX27Q96L92 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SNX27Q96L92 RHOT1P2-201ENST00000366423 333 ntBASIC4.48□□□□□ -1.69
SNX27Q96L92 MTCYBP36-201ENST00000404146 440 ntBASIC4.48□□□□□ -1.69
SNX27Q96L92 RPL21P65-201ENST00000406094 466 ntBASIC4.48□□□□□ -1.69
SNX27Q96L92 RN7SKP142-201ENST00000411236 328 ntBASIC4.48□□□□□ -1.69
SNX27Q96L92 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.48□□□□□ -1.69
SNX27Q96L92 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SNX27Q96L92 MTATP6P27-201ENST00000416987 621 ntBASIC4.48□□□□□ -1.69
SNX27Q96L92 RPL31P45-201ENST00000419532 356 ntBASIC4.48□□□□□ -1.69
SNX27Q96L92 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.48□□□□□ -1.69
SNX27Q96L92 OR8F1P-201ENST00000425243 930 ntBASIC4.48□□□□□ -1.69
SNX27Q96L92 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.48□□□□□ -1.69
SNX27Q96L92 AL590233.1-201ENST00000430017 456 ntBASIC4.48□□□□□ -1.69
SNX27Q96L92 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.48□□□□□ -1.69
SNX27Q96L92 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.48□□□□□ -1.69
SNX27Q96L92 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.48□□□□□ -1.69
SNX27Q96L92 MUPP-201ENST00000438111 566 ntBASIC4.48□□□□□ -1.69
SNX27Q96L92 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.48□□□□□ -1.69
SNX27Q96L92 AC006011.1-201ENST00000442758 349 ntBASIC4.48□□□□□ -1.69
SNX27Q96L92 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.48□□□□□ -1.69
SNX27Q96L92 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.48□□□□□ -1.69
SNX27Q96L92 NDUFS5P3-201ENST00000450668 321 ntBASIC4.48□□□□□ -1.69
SNX27Q96L92 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.48□□□□□ -1.69
SNX27Q96L92 AC106872.3-201ENST00000495104 446 ntBASIC4.48□□□□□ -1.69
SNX27Q96L92 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.48□□□□□ -1.69
SNX27Q96L92 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.48□□□□□ -1.69
SNX27Q96L92 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.48□□□□□ -1.69
SNX27Q96L92 OR8L1P-201ENST00000534005 955 ntBASIC4.48□□□□□ -1.69
SNX27Q96L92 AC063950.1-201ENST00000552036 308 ntBASIC4.48□□□□□ -1.69
SNX27Q96L92 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.48□□□□□ -1.69
SNX27Q96L92 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.48□□□□□ -1.69
SNX27Q96L92 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.48□□□□□ -1.69
SNX27Q96L92 AC012414.6-201ENST00000568241 401 ntBASIC4.48□□□□□ -1.69
SNX27Q96L92 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.48□□□□□ -1.69
SNX27Q96L92 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.48□□□□□ -1.69
SNX27Q96L92 RSL24D1P11-201ENST00000591045 491 ntBASIC4.48□□□□□ -1.69
SNX27Q96L92 AC064872.1-201ENST00000604823 1072 ntBASIC4.48□□□□□ -1.69
SNX27Q96L92 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.48□□□□□ -1.69
SNX27Q96L92 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.48□□□□□ -1.69
SNX27Q96L92 AC239868.4-201ENST00000608318 671 ntBASIC4.48□□□□□ -1.69
SNX27Q96L92 AC105429.2-201ENST00000610567 517 ntBASIC4.48□□□□□ -1.69
SNX27Q96L92 AL445264.1-201ENST00000621719 171 ntBASIC4.48□□□□□ -1.69
SNX27Q96L92 U6.105-201ENST00000637379 88 ntBASIC4.48□□□□□ -1.69
SNX27Q96L92 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SNX27Q96L92 Z73965.1-201ENST00000623412 2297 ntBASIC4.48□□□□□ -1.69
SNX27Q96L92 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SNX27Q96L92 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SNX27Q96L92 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SNX27Q96L92 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SNX27Q96L92 RLIMP1-201ENST00000339626 1680 ntBASIC4.48□□□□□ -1.69
SNX27Q96L92 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SNX27Q96L92 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SNX27Q96L92 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SNX27Q96L92 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SNX27Q96L92 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SNX27Q96L92 AC097714.1-201ENST00000511272 1647 ntBASIC4.47□□□□□ -1.69
SNX27Q96L92 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.47□□□□□ -1.69
SNX27Q96L92 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SNX27Q96L92 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SNX27Q96L92 MIR1250-201ENST00000408098 113 ntBASIC4.47□□□□□ -1.69
SNX27Q96L92 RN7SKP266-201ENST00000410232 287 ntBASIC4.47□□□□□ -1.69
SNX27Q96L92 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.47□□□□□ -1.69
SNX27Q96L92 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.47□□□□□ -1.69
SNX27Q96L92 RPS27AP14-201ENST00000422868 454 ntBASIC4.47□□□□□ -1.69
SNX27Q96L92 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms