Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 RN7SL563P-201ENST00000481233 298 ntBASIC6.49□□□□□ -1.37
MS4A3Q96HJ5 RN7SL516P-201ENST00000496127 297 ntBASIC6.49□□□□□ -1.37
MS4A3Q96HJ5 Y_RNA.690-201ENST00000516603 95 ntBASIC6.49□□□□□ -1.37
MS4A3Q96HJ5 SNORA31.19-201ENST00000517079 126 ntBASIC6.49□□□□□ -1.37
MS4A3Q96HJ5 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC6.49□□□□□ -1.37
MS4A3Q96HJ5 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC6.49□□□□□ -1.37
MS4A3Q96HJ5 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC6.49□□□□□ -1.37
MS4A3Q96HJ5 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC6.49□□□□□ -1.37
MS4A3Q96HJ5 VN1R85P-201ENST00000601587 426 ntBASIC6.49□□□□□ -1.37
MS4A3Q96HJ5 AC008385.1-201ENST00000604421 355 ntBASIC6.49□□□□□ -1.37
MS4A3Q96HJ5 CUX2P1-201ENST00000606426 298 ntBASIC6.49□□□□□ -1.37
MS4A3Q96HJ5 MIR6736-201ENST00000616799 59 ntBASIC6.49□□□□□ -1.37
MS4A3Q96HJ5 AC027309.3-201ENST00000623419 351 ntBASIC6.49□□□□□ -1.37
MS4A3Q96HJ5 METAP1-212ENST00000625963 147 ntTSL 5 BASIC6.49□□□□□ -1.37
MS4A3Q96HJ5 SNORA43.4-201ENST00000629559 138 ntBASIC6.49□□□□□ -1.37
MS4A3Q96HJ5 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC6.49□□□□□ -1.37
MS4A3Q96HJ5 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC6.49□□□□□ -1.37
MS4A3Q96HJ5 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.49□□□□□ -1.37
MS4A3Q96HJ5 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.49□□□□□ -1.37
MS4A3Q96HJ5 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
MS4A3Q96HJ5 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
MS4A3Q96HJ5 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.49□□□□□ -1.37
MS4A3Q96HJ5 ZNF658B-201ENST00000602828 3408 ntBASIC6.49□□□□□ -1.37
MS4A3Q96HJ5 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
MS4A3Q96HJ5 AP000766.1-201ENST00000561746 4140 ntBASIC6.49□□□□□ -1.37
MS4A3Q96HJ5 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
MS4A3Q96HJ5 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC6.49□□□□□ -1.37
MS4A3Q96HJ5 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.49□□□□□ -1.37
MS4A3Q96HJ5 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
MS4A3Q96HJ5 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
MS4A3Q96HJ5 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
MS4A3Q96HJ5 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 AC062029.1-202ENST00000606164 3651 ntBASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 AL596244.1-201ENST00000567068 3779 ntBASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 MIR367-201ENST00000362299 68 ntBASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 SNORA17.1-201ENST00000362945 126 ntBASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 RNU6-1336P-201ENST00000383886 109 ntBASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 SNORA79-201ENST00000408376 140 ntBASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 AL355862.1-201ENST00000412705 353 ntBASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 RPL36P18-201ENST00000419316 318 ntBASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 RPL17P36-201ENST00000420302 549 ntBASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 RPS3P2-201ENST00000421346 701 ntBASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 DDX39BP1-205ENST00000422507 192 ntBASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 PPIL1P1-201ENST00000423936 499 ntBASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 AL354710.1-201ENST00000453641 246 ntBASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 RN7SL182P-201ENST00000496499 300 ntBASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 AC091868.1-201ENST00000508746 304 ntBASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 RN7SKP98-201ENST00000517070 156 ntBASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 IGKV2-29-201ENST00000521304 372 ntBASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 AC093331.1-201ENST00000521474 169 ntBASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 AP005597.2-201ENST00000526238 341 ntBASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 AC007012.1-201ENST00000567192 175 ntBASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 MIR4685-201ENST00000578185 69 ntBASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 MIR7162-201ENST00000611134 69 ntBASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
MS4A3Q96HJ5 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 ADAM24P-201ENST00000398655 2101 ntBASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 DPY19L2P2-203ENST00000435536 1858 ntBASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 SNORA73B-201ENST00000363217 204 ntBASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 U3.7-201ENST00000363668 216 ntBASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 RNA5SP260-201ENST00000363849 111 ntBASIC6.47□□□□□ -1.37
MS4A3Q96HJ5 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 256.6 ms