Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RTP4Q96DX8 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
RTP4Q96DX8 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RTP4Q96DX8 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RTP4Q96DX8 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RTP4Q96DX8 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RTP4Q96DX8 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.87□□□□□ -1.79
RTP4Q96DX8 AL031985.3-201ENST00000565390 2449 ntBASIC3.86□□□□□ -1.79
RTP4Q96DX8 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.86□□□□□ -1.79
RTP4Q96DX8 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RTP4Q96DX8 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RTP4Q96DX8 Y_RNA.6-201ENST00000362350 114 ntBASIC3.86□□□□□ -1.79
RTP4Q96DX8 RNU4-91P-201ENST00000364778 135 ntBASIC3.86□□□□□ -1.79
RTP4Q96DX8 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
RTP4Q96DX8 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.86□□□□□ -1.79
RTP4Q96DX8 PRELID3BP11-201ENST00000414230 479 ntBASIC3.86□□□□□ -1.79
RTP4Q96DX8 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.86□□□□□ -1.79
RTP4Q96DX8 MTND1P23-201ENST00000416931 372 ntBASIC3.86□□□□□ -1.79
RTP4Q96DX8 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RTP4Q96DX8 MTCYBP5-201ENST00000423752 1135 ntBASIC3.86□□□□□ -1.79
RTP4Q96DX8 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.86□□□□□ -1.79
RTP4Q96DX8 AL512649.1-201ENST00000428997 581 ntBASIC3.86□□□□□ -1.79
RTP4Q96DX8 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.86□□□□□ -1.79
RTP4Q96DX8 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.86□□□□□ -1.79
RTP4Q96DX8 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.86□□□□□ -1.79
RTP4Q96DX8 AL022238.1-201ENST00000442557 355 ntBASIC3.86□□□□□ -1.79
RTP4Q96DX8 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.86□□□□□ -1.79
RTP4Q96DX8 NANOGNBP1-201ENST00000448444 480 ntBASIC3.86□□□□□ -1.79
RTP4Q96DX8 AL133547.1-201ENST00000448546 220 ntBASIC3.86□□□□□ -1.79
RTP4Q96DX8 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.86□□□□□ -1.79
RTP4Q96DX8 RPL26P28-201ENST00000451325 435 ntBASIC3.86□□□□□ -1.79
RTP4Q96DX8 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.86□□□□□ -1.79
RTP4Q96DX8 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.86□□□□□ -1.79
RTP4Q96DX8 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.86□□□□□ -1.79
RTP4Q96DX8 SSXP1-201ENST00000453640 473 ntBASIC3.86□□□□□ -1.79
RTP4Q96DX8 AC091564.1-201ENST00000464563 479 ntBASIC3.86□□□□□ -1.79
RTP4Q96DX8 AC010683.1-201ENST00000473673 378 ntBASIC3.86□□□□□ -1.79
RTP4Q96DX8 AC013828.1-201ENST00000481845 158 ntBASIC3.86□□□□□ -1.79
RTP4Q96DX8 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.86□□□□□ -1.79
RTP4Q96DX8 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.86□□□□□ -1.79
RTP4Q96DX8 AC239860.2-201ENST00000525886 270 ntBASIC3.86□□□□□ -1.79
RTP4Q96DX8 AP002748.2-201ENST00000528671 348 ntBASIC3.86□□□□□ -1.79
RTP4Q96DX8 OR4A45P-201ENST00000529954 901 ntBASIC3.86□□□□□ -1.79
RTP4Q96DX8 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.86□□□□□ -1.79
RTP4Q96DX8 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.86□□□□□ -1.79
RTP4Q96DX8 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.86□□□□□ -1.79
RTP4Q96DX8 AC006960.3-201ENST00000561845 705 ntBASIC3.86□□□□□ -1.79
RTP4Q96DX8 AC009063.1-201ENST00000563342 702 ntBASIC3.86□□□□□ -1.79
RTP4Q96DX8 PCMTD1P2-201ENST00000565017 355 ntBASIC3.86□□□□□ -1.79
RTP4Q96DX8 MIR4528-201ENST00000577763 90 ntBASIC3.86□□□□□ -1.79
RTP4Q96DX8 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.86□□□□□ -1.79
RTP4Q96DX8 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.86□□□□□ -1.79
RTP4Q96DX8 SNORD39.3-201ENST00000584451 71 ntBASIC3.86□□□□□ -1.79
RTP4Q96DX8 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.86□□□□□ -1.79
RTP4Q96DX8 AC112230.1-201ENST00000604342 547 ntBASIC3.86□□□□□ -1.79
RTP4Q96DX8 RBM11P1-201ENST00000604951 799 ntBASIC3.86□□□□□ -1.79
RTP4Q96DX8 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.86□□□□□ -1.79
RTP4Q96DX8 AC006566.1-201ENST00000608943 513 ntBASIC3.86□□□□□ -1.79
RTP4Q96DX8 AC027807.2-201ENST00000616099 408 ntBASIC3.86□□□□□ -1.79
RTP4Q96DX8 AC138932.5-201ENST00000617759 563 ntBASIC3.86□□□□□ -1.79
RTP4Q96DX8 CR392039.5-201ENST00000623201 510 ntBASIC3.86□□□□□ -1.79
RTP4Q96DX8 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.86□□□□□ -1.79
RTP4Q96DX8 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.85□□□□□ -1.79
RTP4Q96DX8 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RTP4Q96DX8 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RTP4Q96DX8 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
RTP4Q96DX8 Y_RNA.97-201ENST00000363094 102 ntBASIC3.85□□□□□ -1.79
RTP4Q96DX8 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
RTP4Q96DX8 RNU6-1122P-201ENST00000384449 107 ntBASIC3.85□□□□□ -1.79
RTP4Q96DX8 MIR200C-201ENST00000384980 68 ntBASIC3.85□□□□□ -1.79
RTP4Q96DX8 AL590704.1-201ENST00000402856 794 ntBASIC3.85□□□□□ -1.79
RTP4Q96DX8 MIR548F1-201ENST00000408667 84 ntBASIC3.85□□□□□ -1.79
RTP4Q96DX8 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.85□□□□□ -1.79
RTP4Q96DX8 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.85□□□□□ -1.79
RTP4Q96DX8 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.85□□□□□ -1.79
RTP4Q96DX8 MTATP6P13-201ENST00000438531 667 ntBASIC3.85□□□□□ -1.79
RTP4Q96DX8 AL450263.2-201ENST00000439400 589 ntBASIC3.85□□□□□ -1.79
RTP4Q96DX8 NANOGP10-201ENST00000453325 895 ntBASIC3.85□□□□□ -1.79
RTP4Q96DX8 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RTP4Q96DX8 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.85□□□□□ -1.79
RTP4Q96DX8 VWA8P1-201ENST00000510889 176 ntBASIC3.85□□□□□ -1.79
RTP4Q96DX8 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.85□□□□□ -1.79
RTP4Q96DX8 AC011352.1-201ENST00000512300 793 ntBASIC3.85□□□□□ -1.79
RTP4Q96DX8 AC087883.1-201ENST00000551882 391 ntBASIC3.85□□□□□ -1.79
RTP4Q96DX8 AL121576.1-201ENST00000556055 276 ntBASIC3.85□□□□□ -1.79
RTP4Q96DX8 EIF5A2P1-201ENST00000564027 460 ntBASIC3.85□□□□□ -1.79
RTP4Q96DX8 AP001004.1-201ENST00000582468 324 ntBASIC3.85□□□□□ -1.79
RTP4Q96DX8 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.85□□□□□ -1.79
RTP4Q96DX8 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.85□□□□□ -1.79
RTP4Q96DX8 AC126118.1-201ENST00000607744 628 ntBASIC3.85□□□□□ -1.79
RTP4Q96DX8 AC103710.4-201ENST00000609301 899 ntBASIC3.85□□□□□ -1.79
RTP4Q96DX8 AL589743.7-201ENST00000612637 233 ntBASIC3.85□□□□□ -1.79
RTP4Q96DX8 AC025588.4-201ENST00000615802 908 ntBASIC3.85□□□□□ -1.79
RTP4Q96DX8 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.85□□□□□ -1.79
RTP4Q96DX8 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.85□□□□□ -1.79
RTP4Q96DX8 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
RTP4Q96DX8 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RTP4Q96DX8 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RTP4Q96DX8 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RTP4Q96DX8 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 160.7 ms