Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
VPS33AQ96AX1 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.59□□□□□ -1.83
VPS33AQ96AX1 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VPS33AQ96AX1 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VPS33AQ96AX1 DEFB108F-201ENST00000344638 222 ntBASIC3.59□□□□□ -1.83
VPS33AQ96AX1 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.59□□□□□ -1.83
VPS33AQ96AX1 RNU6-283P-201ENST00000364788 107 ntBASIC3.59□□□□□ -1.83
VPS33AQ96AX1 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
VPS33AQ96AX1 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
VPS33AQ96AX1 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.59□□□□□ -1.83
VPS33AQ96AX1 SNORA57.3-201ENST00000411095 141 ntBASIC3.59□□□□□ -1.83
VPS33AQ96AX1 AL356095.1-201ENST00000417217 199 ntBASIC3.59□□□□□ -1.83
VPS33AQ96AX1 UBE2D3P2-201ENST00000424409 445 ntBASIC3.59□□□□□ -1.83
VPS33AQ96AX1 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.59□□□□□ -1.83
VPS33AQ96AX1 RPS29P31-201ENST00000446147 164 ntBASIC3.59□□□□□ -1.83
VPS33AQ96AX1 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.59□□□□□ -1.83
VPS33AQ96AX1 MTND1P9-201ENST00000453775 944 ntBASIC3.59□□□□□ -1.83
VPS33AQ96AX1 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.59□□□□□ -1.83
VPS33AQ96AX1 AC108860.1-201ENST00000484521 383 ntBASIC3.59□□□□□ -1.83
VPS33AQ96AX1 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.59□□□□□ -1.83
VPS33AQ96AX1 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.59□□□□□ -1.83
VPS33AQ96AX1 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.59□□□□□ -1.83
VPS33AQ96AX1 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.59□□□□□ -1.83
VPS33AQ96AX1 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.59□□□□□ -1.83
VPS33AQ96AX1 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.59□□□□□ -1.83
VPS33AQ96AX1 RN7SKP265-201ENST00000516448 223 ntBASIC3.59□□□□□ -1.83
VPS33AQ96AX1 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.59□□□□□ -1.83
VPS33AQ96AX1 MRPL49P2-201ENST00000521066 465 ntBASIC3.59□□□□□ -1.83
VPS33AQ96AX1 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.59□□□□□ -1.83
VPS33AQ96AX1 DEFB108D-201ENST00000527787 222 ntBASIC3.59□□□□□ -1.83
VPS33AQ96AX1 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.59□□□□□ -1.83
VPS33AQ96AX1 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.59□□□□□ -1.83
VPS33AQ96AX1 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.59□□□□□ -1.83
VPS33AQ96AX1 COX6CP3-201ENST00000580869 223 ntBASIC3.59□□□□□ -1.83
VPS33AQ96AX1 MIR3939-201ENST00000582614 106 ntBASIC3.59□□□□□ -1.83
VPS33AQ96AX1 MIR4760-201ENST00000585040 80 ntBASIC3.59□□□□□ -1.83
VPS33AQ96AX1 AL109653.1-201ENST00000603091 248 ntBASIC3.59□□□□□ -1.83
VPS33AQ96AX1 SNORA62.6-201ENST00000606322 83 ntBASIC3.59□□□□□ -1.83
VPS33AQ96AX1 RNU4-89P-201ENST00000607443 133 ntBASIC3.59□□□□□ -1.83
VPS33AQ96AX1 AP002826.1-201ENST00000608835 315 ntBASIC3.59□□□□□ -1.83
VPS33AQ96AX1 MIR6867-201ENST00000610636 67 ntBASIC3.59□□□□□ -1.83
VPS33AQ96AX1 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
VPS33AQ96AX1 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.59□□□□□ -1.83
VPS33AQ96AX1 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.84
VPS33AQ96AX1 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.59□□□□□ -1.84
VPS33AQ96AX1 MTCO1P9-201ENST00000505577 1534 ntBASIC3.59□□□□□ -1.84
VPS33AQ96AX1 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
VPS33AQ96AX1 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
VPS33AQ96AX1 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
VPS33AQ96AX1 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
VPS33AQ96AX1 AC087359.1-201ENST00000508335 1740 ntBASIC3.58□□□□□ -1.84
VPS33AQ96AX1 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.58□□□□□ -1.84
VPS33AQ96AX1 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.58□□□□□ -1.84
VPS33AQ96AX1 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
VPS33AQ96AX1 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VPS33AQ96AX1 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
VPS33AQ96AX1 RNU6-97P-201ENST00000363387 104 ntBASIC3.58□□□□□ -1.84
VPS33AQ96AX1 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
VPS33AQ96AX1 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VPS33AQ96AX1 RPS3AP24-201ENST00000407896 734 ntBASIC3.58□□□□□ -1.84
VPS33AQ96AX1 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.58□□□□□ -1.84
VPS33AQ96AX1 RN7SKP53-201ENST00000411337 315 ntBASIC3.58□□□□□ -1.84
VPS33AQ96AX1 AL008987.1-201ENST00000415528 237 ntBASIC3.58□□□□□ -1.84
VPS33AQ96AX1 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.58□□□□□ -1.84
VPS33AQ96AX1 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.58□□□□□ -1.84
VPS33AQ96AX1 UBDP1-202ENST00000457888 382 ntBASIC3.58□□□□□ -1.84
VPS33AQ96AX1 AC012181.1-201ENST00000479895 423 ntBASIC3.58□□□□□ -1.84
VPS33AQ96AX1 CBX3P3-201ENST00000508108 532 ntBASIC3.58□□□□□ -1.84
VPS33AQ96AX1 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.58□□□□□ -1.84
VPS33AQ96AX1 SNORA31.9-201ENST00000516429 84 ntBASIC3.58□□□□□ -1.84
VPS33AQ96AX1 FAM60DP-201ENST00000524174 632 ntBASIC3.58□□□□□ -1.84
VPS33AQ96AX1 AP001804.3-201ENST00000525146 880 ntBASIC3.58□□□□□ -1.84
VPS33AQ96AX1 OR5AP1P-201ENST00000529730 940 ntBASIC3.58□□□□□ -1.84
VPS33AQ96AX1 MTND1P24-201ENST00000552175 861 ntBASIC3.58□□□□□ -1.84
VPS33AQ96AX1 AC025884.1-201ENST00000556034 378 ntBASIC3.58□□□□□ -1.84
VPS33AQ96AX1 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.58□□□□□ -1.84
VPS33AQ96AX1 MIR3921-201ENST00000577308 85 ntBASIC3.58□□□□□ -1.84
VPS33AQ96AX1 MIR4738-201ENST00000579134 87 ntBASIC3.58□□□□□ -1.84
VPS33AQ96AX1 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.58□□□□□ -1.84
VPS33AQ96AX1 AC020914.6-201ENST00000594327 272 ntBASIC3.58□□□□□ -1.84
VPS33AQ96AX1 KLKP1-201ENST00000595979 403 ntBASIC3.58□□□□□ -1.84
VPS33AQ96AX1 VN1R92P-201ENST00000598511 928 ntBASIC3.58□□□□□ -1.84
VPS33AQ96AX1 AC106900.2-201ENST00000604994 317 ntBASIC3.58□□□□□ -1.84
VPS33AQ96AX1 RMST_8.1-201ENST00000610287 165 ntBASIC3.58□□□□□ -1.84
VPS33AQ96AX1 TUSC7.1-201ENST00000610969 165 ntBASIC3.58□□□□□ -1.84
VPS33AQ96AX1 AL450489.1-201ENST00000612071 468 ntBASIC3.58□□□□□ -1.84
VPS33AQ96AX1 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.58□□□□□ -1.84
VPS33AQ96AX1 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
VPS33AQ96AX1 AC018816.2-201ENST00000621460 353 ntBASIC3.58□□□□□ -1.84
VPS33AQ96AX1 AL161637.1-201ENST00000622380 412 ntBASIC3.58□□□□□ -1.84
VPS33AQ96AX1 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.58□□□□□ -1.84
VPS33AQ96AX1 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.58□□□□□ -1.84
VPS33AQ96AX1 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
VPS33AQ96AX1 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
VPS33AQ96AX1 AC126755.2-208ENST00000327792 462 ntBASIC3.57□□□□□ -1.84
VPS33AQ96AX1 AC138969.1-213ENST00000331436 462 ntBASIC3.57□□□□□ -1.84
VPS33AQ96AX1 RNA5SP97-201ENST00000365006 84 ntBASIC3.57□□□□□ -1.84
VPS33AQ96AX1 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.57□□□□□ -1.84
VPS33AQ96AX1 RNU6-1207P-201ENST00000384343 107 ntBASIC3.57□□□□□ -1.84
VPS33AQ96AX1 MIR591-201ENST00000385290 95 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms