Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 AC009101.1-201ENST00000568135 242 ntBASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 AC068135.2-201ENST00000569293 1028 ntBASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 AC022655.2-201ENST00000577280 318 ntBASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 MIR4715-201ENST00000584117 79 ntBASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 AC245014.2-201ENST00000603689 287 ntBASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 AC246785.4-201ENST00000605374 287 ntBASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 OR10AB1P-201ENST00000609613 938 ntBASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 AL158196.1-201ENST00000616786 434 ntBASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 AL023881.1-201ENST00000621088 301 ntBASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 AL008636.1-201ENST00000625038 1018 ntBASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 Z82217.1-201ENST00000625157 8149 ntBASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 AC092125.1-201ENST00000562568 1995 ntBASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 Y_RNA.88-201ENST00000363029 99 ntBASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 Y_RNA.256-201ENST00000364594 104 ntBASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 RNY3P14-201ENST00000384309 102 ntBASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 ENSAP1-201ENST00000392855 326 ntBASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 CYB5AP4-201ENST00000396692 399 ntBASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 RNU4-55P-201ENST00000410731 137 ntBASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 MTCYBP45-201ENST00000435243 565 ntBASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 AL356276.2-201ENST00000435919 558 ntBASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 CBX1P1-201ENST00000440184 427 ntBASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 HMGB3P22-202ENST00000451823 572 ntBASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 AP1S2P1-201ENST00000457344 379 ntBASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 RPL23AP24-201ENST00000458203 385 ntBASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 AP001992.1-205ENST00000462248 379 ntBASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 RPL31P58-201ENST00000469001 379 ntBASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 AC087385.1-201ENST00000475062 312 ntBASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 PRDX4P1-201ENST00000507189 574 ntBASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 SAP18P1-201ENST00000512058 390 ntBASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 ARL2BPP6-201ENST00000512757 439 ntBASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 AC010342.1-201ENST00000514047 877 ntBASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 AP001893.2-201ENST00000526949 202 ntBASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 OR5AN2P-201ENST00000534535 896 ntBASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 AC024224.1-201ENST00000538284 609 ntBASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 RPL23AP87-202ENST00000573039 466 ntBASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 AC090615.1-201ENST00000577519 154 ntBASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 AC007566.2-201ENST00000603642 413 ntBASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 AC025588.3-201ENST00000604182 274 ntBASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 AC067959.1-201ENST00000604334 379 ntBASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 MIR6820-201ENST00000611508 62 ntBASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 MLECP1-201ENST00000615893 709 ntBASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 AC009159.1-201ENST00000618386 642 ntBASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 AL596245.1-201ENST00000618994 362 ntBASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 AL732618.1-201ENST00000623251 301 ntBASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 AC067931.1-201ENST00000624190 671 ntBASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 MIR3688-2-201ENST00000636963 87 ntBASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 AL773545.4-201ENST00000637262 310 ntBASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 AC010149.2-201ENST00000637608 315 ntBASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 AL513478.4-201ENST00000641636 310 ntBASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
ATG4AQ8WYN0 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 NUP58P1-201ENST00000502546 1738 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms