Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RTL3Q8N8U3 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.56□□□□□ -1.84
RTL3Q8N8U3 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.56□□□□□ -1.84
RTL3Q8N8U3 AC087808.1-201ENST00000520501 361 ntBASIC3.56□□□□□ -1.84
RTL3Q8N8U3 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RTL3Q8N8U3 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.56□□□□□ -1.84
RTL3Q8N8U3 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.56□□□□□ -1.84
RTL3Q8N8U3 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.56□□□□□ -1.84
RTL3Q8N8U3 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.56□□□□□ -1.84
RTL3Q8N8U3 MIR1254-2-201ENST00000579553 63 ntBASIC3.56□□□□□ -1.84
RTL3Q8N8U3 AC234772.3-201ENST00000602277 528 ntBASIC3.56□□□□□ -1.84
RTL3Q8N8U3 AC022022.2-201ENST00000602989 360 ntBASIC3.56□□□□□ -1.84
RTL3Q8N8U3 AC093424.1-201ENST00000604999 338 ntBASIC3.56□□□□□ -1.84
RTL3Q8N8U3 AC069545.1-201ENST00000605671 358 ntBASIC3.56□□□□□ -1.84
RTL3Q8N8U3 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.56□□□□□ -1.84
RTL3Q8N8U3 AC006386.1-201ENST00000619436 415 ntBASIC3.56□□□□□ -1.84
RTL3Q8N8U3 AL357559.1-201ENST00000622228 274 ntBASIC3.56□□□□□ -1.84
RTL3Q8N8U3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
RTL3Q8N8U3 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.56□□□□□ -1.84
RTL3Q8N8U3 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RTL3Q8N8U3 AC002546.1-201ENST00000588041 2504 ntBASIC3.55□□□□□ -1.84
RTL3Q8N8U3 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RTL3Q8N8U3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
RTL3Q8N8U3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
RTL3Q8N8U3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.55□□□□□ -1.84
RTL3Q8N8U3 AC099786.3-201ENST00000565735 1410 ntBASIC3.55□□□□□ -1.84
RTL3Q8N8U3 RPL7P26-201ENST00000333817 754 ntBASIC3.55□□□□□ -1.84
RTL3Q8N8U3 RNU4-35P-201ENST00000362588 141 ntBASIC3.55□□□□□ -1.84
RTL3Q8N8U3 RNU4-28P-201ENST00000364739 141 ntBASIC3.55□□□□□ -1.84
RTL3Q8N8U3 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
RTL3Q8N8U3 SNORD17-201ENST00000390930 237 ntBASIC3.55□□□□□ -1.84
RTL3Q8N8U3 Z98941.1-201ENST00000407764 100 ntBASIC3.55□□□□□ -1.84
RTL3Q8N8U3 RN7SKP27-201ENST00000410684 333 ntBASIC3.55□□□□□ -1.84
RTL3Q8N8U3 AC245052.5-201ENST00000416320 649 ntBASIC3.55□□□□□ -1.84
RTL3Q8N8U3 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.55□□□□□ -1.84
RTL3Q8N8U3 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.55□□□□□ -1.84
RTL3Q8N8U3 AC007435.1-201ENST00000421086 415 ntBASIC3.55□□□□□ -1.84
RTL3Q8N8U3 AC069157.1-201ENST00000421749 137 ntBASIC3.55□□□□□ -1.84
RTL3Q8N8U3 AL513175.2-201ENST00000422071 443 ntBASIC3.55□□□□□ -1.84
RTL3Q8N8U3 PSMA6P3-201ENST00000428242 164 ntBASIC3.55□□□□□ -1.84
RTL3Q8N8U3 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.55□□□□□ -1.84
RTL3Q8N8U3 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.55□□□□□ -1.84
RTL3Q8N8U3 AC092427.1-201ENST00000439177 601 ntBASIC3.55□□□□□ -1.84
RTL3Q8N8U3 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.55□□□□□ -1.84
RTL3Q8N8U3 AC112492.1-201ENST00000449607 712 ntBASIC3.55□□□□□ -1.84
RTL3Q8N8U3 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.55□□□□□ -1.84
RTL3Q8N8U3 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.55□□□□□ -1.84
RTL3Q8N8U3 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.55□□□□□ -1.84
RTL3Q8N8U3 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.55□□□□□ -1.84
RTL3Q8N8U3 AC007537.2-201ENST00000472093 511 ntBASIC3.55□□□□□ -1.84
RTL3Q8N8U3 AL049830.2-201ENST00000480072 201 ntBASIC3.55□□□□□ -1.84
RTL3Q8N8U3 RPL21P129-201ENST00000491732 478 ntBASIC3.55□□□□□ -1.84
RTL3Q8N8U3 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.55□□□□□ -1.84
RTL3Q8N8U3 RNU6-1095P-201ENST00000516148 108 ntBASIC3.55□□□□□ -1.84
RTL3Q8N8U3 SNORA31.8-201ENST00000516327 108 ntBASIC3.55□□□□□ -1.84
RTL3Q8N8U3 SNORA70.19-201ENST00000516717 90 ntBASIC3.55□□□□□ -1.84
RTL3Q8N8U3 AP001636.2-201ENST00000525517 696 ntBASIC3.55□□□□□ -1.84
RTL3Q8N8U3 AC125611.1-201ENST00000549563 229 ntBASIC3.55□□□□□ -1.84
RTL3Q8N8U3 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.55□□□□□ -1.84
RTL3Q8N8U3 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.55□□□□□ -1.84
RTL3Q8N8U3 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.55□□□□□ -1.84
RTL3Q8N8U3 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.55□□□□□ -1.84
RTL3Q8N8U3 AC092354.2-201ENST00000607786 514 ntBASIC3.55□□□□□ -1.84
RTL3Q8N8U3 OR1S1-201ENST00000624470 978 ntBASIC3.55□□□□□ -1.84
RTL3Q8N8U3 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.55□□□□□ -1.84
RTL3Q8N8U3 AL645937.1-201ENST00000641739 1652 ntBASIC3.55□□□□□ -1.84
RTL3Q8N8U3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.54□□□□□ -1.84
RTL3Q8N8U3 AC032011.1-201ENST00000611703 1549 ntBASIC3.54□□□□□ -1.84
RTL3Q8N8U3 AL049781.1-201ENST00000623195 3585 ntBASIC3.54□□□□□ -1.84
RTL3Q8N8U3 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.54□□□□□ -1.84
RTL3Q8N8U3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RTL3Q8N8U3 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
RTL3Q8N8U3 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RTL3Q8N8U3 RNU6-173P-201ENST00000364215 104 ntBASIC3.54□□□□□ -1.84
RTL3Q8N8U3 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.54□□□□□ -1.84
RTL3Q8N8U3 Y_RNA.472-201ENST00000384322 102 ntBASIC3.54□□□□□ -1.84
RTL3Q8N8U3 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.54□□□□□ -1.84
RTL3Q8N8U3 AL136310.1-201ENST00000404926 654 ntBASIC3.54□□□□□ -1.84
RTL3Q8N8U3 RNU2-42P-201ENST00000410697 113 ntBASIC3.54□□□□□ -1.84
RTL3Q8N8U3 HIGD1AP15-201ENST00000416198 280 ntBASIC3.54□□□□□ -1.84
RTL3Q8N8U3 VPS26BP1-201ENST00000417155 755 ntBASIC3.54□□□□□ -1.84
RTL3Q8N8U3 RPL22P18-201ENST00000417197 377 ntBASIC3.54□□□□□ -1.84
RTL3Q8N8U3 RPS3AP37-201ENST00000419176 745 ntBASIC3.54□□□□□ -1.84
RTL3Q8N8U3 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.54□□□□□ -1.84
RTL3Q8N8U3 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.54□□□□□ -1.84
RTL3Q8N8U3 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.54□□□□□ -1.84
RTL3Q8N8U3 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.54□□□□□ -1.84
RTL3Q8N8U3 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.54□□□□□ -1.84
RTL3Q8N8U3 CR769776.1-201ENST00000441254 787 ntBASIC3.54□□□□□ -1.84
RTL3Q8N8U3 HMGB3P6-201ENST00000444896 598 ntBASIC3.54□□□□□ -1.84
RTL3Q8N8U3 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.54□□□□□ -1.84
RTL3Q8N8U3 AL589880.1-201ENST00000448271 287 ntBASIC3.54□□□□□ -1.84
RTL3Q8N8U3 USP9YP34-201ENST00000453983 808 ntBASIC3.54□□□□□ -1.84
RTL3Q8N8U3 PTGES3P5-201ENST00000455109 434 ntBASIC3.54□□□□□ -1.84
RTL3Q8N8U3 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.54□□□□□ -1.84
RTL3Q8N8U3 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RTL3Q8N8U3 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.54□□□□□ -1.84
RTL3Q8N8U3 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.54□□□□□ -1.84
RTL3Q8N8U3 AC026784.1-201ENST00000507986 352 ntBASIC3.54□□□□□ -1.84
RTL3Q8N8U3 AC112673.1-201ENST00000513168 575 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms