Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 AC008758.3-201ENST00000507003 1829 ntBASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 MIR411-201ENST00000362239 96 ntBASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 RNU4-44P-201ENST00000363050 141 ntBASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 Y_RNA.122-201ENST00000363331 96 ntBASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 Y_RNA.199-201ENST00000364014 102 ntBASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 RNA5SP156-201ENST00000410250 110 ntBASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 Y_RNA.592-201ENST00000410274 109 ntBASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 AL354766.1-201ENST00000423396 542 ntBASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 AC099782.1-201ENST00000425889 474 ntBASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 CYCSP12-201ENST00000437729 300 ntBASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 NDUFB4P10-201ENST00000452541 359 ntBASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 AL354710.1-201ENST00000453641 246 ntBASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 AC234775.1-201ENST00000454247 670 ntBASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 RPS29P26-201ENST00000477483 171 ntBASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 RPS23P5-201ENST00000495419 428 ntBASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 AC113367.2-201ENST00000505749 160 ntBASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 NDUFB5P1-201ENST00000508134 564 ntBASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 AC008716.1-201ENST00000511084 513 ntBASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 AC113155.1-201ENST00000511141 769 ntBASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 AC067942.3-201ENST00000512025 362 ntBASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 RN7SKP60-201ENST00000516985 239 ntBASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 IGKV2-19-201ENST00000518132 283 ntBASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 AP000648.1-201ENST00000529682 397 ntBASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 AC138207.8-204ENST00000579588 527 ntBASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 RN7SL230P-201ENST00000580835 303 ntBASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 OR1M4P-201ENST00000589199 287 ntBASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 AC068790.4-201ENST00000602474 263 ntBASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 FP236240.3-201ENST00000623061 327 ntBASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 AL355480.1-201ENST00000629041 99 ntBASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 AP000560.1-201ENST00000624150 1937 ntBASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC116Q8IYX3 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 AC007529.1-201ENST00000418574 2178 ntBASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 AC022325.1-201ENST00000502748 2199 ntBASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 AC068769.1-201ENST00000474767 2426 ntBASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 RNU6-682P-201ENST00000363843 106 ntBASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 MIR621-201ENST00000384919 96 ntBASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 AC108479.1-201ENST00000431142 427 ntBASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 RPL21P41-201ENST00000459863 264 ntBASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 RN7SL836P-201ENST00000476140 296 ntBASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 HMGN2P13-201ENST00000476476 274 ntBASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 AP002453.1-201ENST00000492327 668 ntBASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 RNU6-1278P-201ENST00000516130 107 ntBASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 RNU6-390P-201ENST00000516259 103 ntBASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 RNA5SP434-201ENST00000516647 121 ntBASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 RNU6-352P-201ENST00000516908 107 ntBASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 AC024405.2-202ENST00000532731 184 ntBASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 AC004024.1-201ENST00000549244 247 ntBASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 CPDP1-201ENST00000579660 283 ntBASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 AC007566.2-201ENST00000603642 413 ntBASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 MIR3976-201ENST00000606807 139 ntBASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 AC005344.1-201ENST00000613391 459 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms