Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.59□□□□□ -1.99
DDX60Q8IY21 AC087241.2-201ENST00000535801 324 ntBASIC2.59□□□□□ -1.99
DDX60Q8IY21 AADACP1-206ENST00000561502 1193 ntBASIC2.59□□□□□ -1.99
DDX60Q8IY21 AP001004.1-201ENST00000582468 324 ntBASIC2.59□□□□□ -1.99
DDX60Q8IY21 AC011494.1-201ENST00000596454 237 ntBASIC2.59□□□□□ -1.99
DDX60Q8IY21 RNU6-84P-201ENST00000607737 102 ntBASIC2.59□□□□□ -1.99
DDX60Q8IY21 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
DDX60Q8IY21 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.59□□□□□ -2
DDX60Q8IY21 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
DDX60Q8IY21 SNORA17.3-201ENST00000391159 129 ntBASIC2.59□□□□□ -2
DDX60Q8IY21 AC004866.2-201ENST00000438285 481 ntBASIC2.59□□□□□ -2
DDX60Q8IY21 AC025181.1-201ENST00000477507 416 ntBASIC2.59□□□□□ -2
DDX60Q8IY21 AC010265.1-201ENST00000513509 211 ntBASIC2.59□□□□□ -2
DDX60Q8IY21 FAM92A1P1-201ENST00000528023 890 ntBASIC2.59□□□□□ -2
DDX60Q8IY21 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.59□□□□□ -2
DDX60Q8IY21 AL022099.1-201ENST00000604551 712 ntBASIC2.59□□□□□ -2
DDX60Q8IY21 AC013562.2-201ENST00000611632 603 ntBASIC2.59□□□□□ -2
DDX60Q8IY21 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.58□□□□□ -2
DDX60Q8IY21 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
DDX60Q8IY21 ZNF720P1-201ENST00000562403 1939 ntBASIC2.58□□□□□ -2
DDX60Q8IY21 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
DDX60Q8IY21 RNA5SP338-201ENST00000410495 85 ntBASIC2.58□□□□□ -2
DDX60Q8IY21 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.58□□□□□ -2
DDX60Q8IY21 AL592045.1-201ENST00000429867 352 ntBASIC2.58□□□□□ -2
DDX60Q8IY21 RN7SKP210-201ENST00000459176 261 ntBASIC2.58□□□□□ -2
DDX60Q8IY21 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC2.58□□□□□ -2
DDX60Q8IY21 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.58□□□□□ -2
DDX60Q8IY21 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
DDX60Q8IY21 CCNHP1-201ENST00000513311 678 ntBASIC2.58□□□□□ -2
DDX60Q8IY21 AC068339.2-201ENST00000534395 618 ntBASIC2.58□□□□□ -2
DDX60Q8IY21 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.58□□□□□ -2
DDX60Q8IY21 AC007687.1-201ENST00000602704 304 ntBASIC2.58□□□□□ -2
DDX60Q8IY21 AP000942.3-201ENST00000603702 160 ntBASIC2.58□□□□□ -2
DDX60Q8IY21 YWHAEP7-203ENST00000622054 312 ntBASIC2.58□□□□□ -2
DDX60Q8IY21 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
DDX60Q8IY21 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
DDX60Q8IY21 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
DDX60Q8IY21 Y_RNA.238-201ENST00000364441 102 ntBASIC2.57□□□□□ -2
DDX60Q8IY21 SNORA80E-201ENST00000384744 137 ntBASIC2.57□□□□□ -2
DDX60Q8IY21 Y_RNA.595-201ENST00000410403 105 ntBASIC2.57□□□□□ -2
DDX60Q8IY21 AC003989.2-201ENST00000440224 169 ntBASIC2.57□□□□□ -2
DDX60Q8IY21 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.57□□□□□ -2
DDX60Q8IY21 AL445669.2-201ENST00000454425 421 ntBASIC2.57□□□□□ -2
DDX60Q8IY21 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.57□□□□□ -2
DDX60Q8IY21 GZMAP1-201ENST00000503054 631 ntBASIC2.57□□□□□ -2
DDX60Q8IY21 RPL23AP78-201ENST00000599928 470 ntBASIC2.57□□□□□ -2
DDX60Q8IY21 AP004247.3-201ENST00000608682 624 ntBASIC2.57□□□□□ -2
DDX60Q8IY21 MTND4P35-201ENST00000604257 1375 ntBASIC2.57□□□□□ -2
DDX60Q8IY21 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
DDX60Q8IY21 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
DDX60Q8IY21 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
DDX60Q8IY21 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
DDX60Q8IY21 ADAM3A-203ENST00000461344 2157 ntBASIC2.57□□□□□ -2
DDX60Q8IY21 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC2.56□□□□□ -2
DDX60Q8IY21 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.56□□□□□ -2
DDX60Q8IY21 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.56□□□□□ -2
DDX60Q8IY21 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.56□□□□□ -2
DDX60Q8IY21 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.56□□□□□ -2
DDX60Q8IY21 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.56□□□□□ -2
DDX60Q8IY21 CBWD4P-201ENST00000445695 655 ntBASIC2.56□□□□□ -2
DDX60Q8IY21 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.56□□□□□ -2
DDX60Q8IY21 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
DDX60Q8IY21 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.56□□□□□ -2
DDX60Q8IY21 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
DDX60Q8IY21 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.56□□□□□ -2
DDX60Q8IY21 AC011890.2-201ENST00000613393 294 ntBASIC2.56□□□□□ -2
DDX60Q8IY21 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.56□□□□□ -2
DDX60Q8IY21 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.55□□□□□ -2
DDX60Q8IY21 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.55□□□□□ -2
DDX60Q8IY21 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.55□□□□□ -2
DDX60Q8IY21 Y_RNA.118-201ENST00000363300 101 ntBASIC2.55□□□□□ -2
DDX60Q8IY21 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.55□□□□□ -2
DDX60Q8IY21 AL445646.1-201ENST00000431784 216 ntBASIC2.55□□□□□ -2
DDX60Q8IY21 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.55□□□□□ -2
DDX60Q8IY21 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
DDX60Q8IY21 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.55□□□□□ -2
DDX60Q8IY21 RNU6-295P-201ENST00000516901 104 ntBASIC2.55□□□□□ -2
DDX60Q8IY21 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
DDX60Q8IY21 AP000889.2-201ENST00000532684 490 ntBASIC2.55□□□□□ -2
DDX60Q8IY21 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.55□□□□□ -2
DDX60Q8IY21 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.55□□□□□ -2
DDX60Q8IY21 AC131902.3-201ENST00000611767 581 ntBASIC2.55□□□□□ -2
DDX60Q8IY21 AC091834.1-201ENST00000614543 472 ntBASIC2.55□□□□□ -2
DDX60Q8IY21 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.55□□□□□ -2
DDX60Q8IY21 MTND5P28-201ENST00000438005 1594 ntBASIC2.55□□□□□ -2
DDX60Q8IY21 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.55□□□□□ -2
DDX60Q8IY21 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
DDX60Q8IY21 AC010329.2-201ENST00000595195 2737 ntBASIC2.55□□□□□ -2
DDX60Q8IY21 AC010680.1-201ENST00000590024 3590 ntBASIC2.54□□□□□ -2
DDX60Q8IY21 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.54□□□□□ -2
DDX60Q8IY21 AC104435.1-201ENST00000483483 166 ntBASIC2.54□□□□□ -2
DDX60Q8IY21 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.54□□□□□ -2
DDX60Q8IY21 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.54□□□□□ -2
DDX60Q8IY21 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.54□□□□□ -2
DDX60Q8IY21 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.54□□□□□ -2
DDX60Q8IY21 DUXAP3-201ENST00000603616 594 ntBASIC2.54□□□□□ -2
DDX60Q8IY21 AC092650.2-201ENST00000619984 902 ntBASIC2.54□□□□□ -2
DDX60Q8IY21 RPL23AP61-201ENST00000623642 466 ntBASIC2.54□□□□□ -2
DDX60Q8IY21 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.54□□□□□ -2
DDX60Q8IY21 NSRP1P1-201ENST00000444067 1693 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms