Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.03□□□□□ -1.92
NUDCD3Q8IVD9 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.03□□□□□ -1.92
NUDCD3Q8IVD9 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
NUDCD3Q8IVD9 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.03□□□□□ -1.92
NUDCD3Q8IVD9 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
NUDCD3Q8IVD9 AC004062.1-201ENST00000509926 645 ntBASIC3.03□□□□□ -1.92
NUDCD3Q8IVD9 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.03□□□□□ -1.92
NUDCD3Q8IVD9 SAP18P1-201ENST00000512058 390 ntBASIC3.03□□□□□ -1.92
NUDCD3Q8IVD9 SNORA48.10-201ENST00000516965 160 ntBASIC3.03□□□□□ -1.92
NUDCD3Q8IVD9 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.03□□□□□ -1.92
NUDCD3Q8IVD9 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
NUDCD3Q8IVD9 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.03□□□□□ -1.92
NUDCD3Q8IVD9 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.03□□□□□ -1.92
NUDCD3Q8IVD9 AC010653.1-201ENST00000571108 881 ntBASIC3.03□□□□□ -1.92
NUDCD3Q8IVD9 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.03□□□□□ -1.92
NUDCD3Q8IVD9 MIR3922-201ENST00000585192 84 ntBASIC3.03□□□□□ -1.92
NUDCD3Q8IVD9 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.03□□□□□ -1.92
NUDCD3Q8IVD9 AC008507.2-201ENST00000588402 1176 ntBASIC3.03□□□□□ -1.92
NUDCD3Q8IVD9 AC083760.1-201ENST00000589621 670 ntBASIC3.03□□□□□ -1.92
NUDCD3Q8IVD9 PRELID3BP8-201ENST00000604148 295 ntBASIC3.03□□□□□ -1.92
NUDCD3Q8IVD9 AL109618.2-201ENST00000605527 211 ntBASIC3.03□□□□□ -1.92
NUDCD3Q8IVD9 AL583856.2-201ENST00000606298 543 ntBASIC3.03□□□□□ -1.92
NUDCD3Q8IVD9 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.03□□□□□ -1.92
NUDCD3Q8IVD9 AC100793.4-201ENST00000613683 429 ntBASIC3.03□□□□□ -1.92
NUDCD3Q8IVD9 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.03□□□□□ -1.92
NUDCD3Q8IVD9 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.03□□□□□ -1.92
NUDCD3Q8IVD9 AC034229.5-201ENST00000624258 185 ntBASIC3.03□□□□□ -1.92
NUDCD3Q8IVD9 AC026634.1-201ENST00000634369 198 ntBASIC3.03□□□□□ -1.92
NUDCD3Q8IVD9 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.03□□□□□ -1.92
NUDCD3Q8IVD9 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.03□□□□□ -1.92
NUDCD3Q8IVD9 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
NUDCD3Q8IVD9 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
NUDCD3Q8IVD9 AC009487.2-201ENST00000420969 6821 ntBASIC3.03□□□□□ -1.92
NUDCD3Q8IVD9 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
NUDCD3Q8IVD9 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 HMGB1P5-201ENST00000255320 642 ntBASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 SNORD15B-201ENST00000384714 146 ntBASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 U3.29-201ENST00000391296 212 ntBASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 RPL7P27-201ENST00000403775 720 ntBASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 AL024507.1-201ENST00000412741 274 ntBASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 RPS7P15-201ENST00000415804 584 ntBASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 MTCO3P12-201ENST00000416718 547 ntBASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 AC093151.1-201ENST00000427711 313 ntBASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 AC016550.1-201ENST00000505348 785 ntBASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 AC126177.3-201ENST00000551839 688 ntBASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 AC034105.4-201ENST00000568304 277 ntBASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 AC092954.1-201ENST00000609121 445 ntBASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 AL355365.1-201ENST00000616480 294 ntBASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 AC039056.2-201ENST00000622261 511 ntBASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 AC084035.1-201ENST00000634543 607 ntBASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 AC244517.1-201ENST00000606030 2086 ntBASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 NUP58P1-201ENST00000502546 1738 ntBASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 AP002907.1-201ENST00000606361 1430 ntBASIC3.02□□□□□ -1.93
NUDCD3Q8IVD9 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.01□□□□□ -1.93
NUDCD3Q8IVD9 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.01□□□□□ -1.93
NUDCD3Q8IVD9 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.01□□□□□ -1.93
NUDCD3Q8IVD9 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
NUDCD3Q8IVD9 AC016769.3-201ENST00000396562 315 ntBASIC3.01□□□□□ -1.93
NUDCD3Q8IVD9 RNU6-712P-201ENST00000410558 100 ntBASIC3.01□□□□□ -1.93
NUDCD3Q8IVD9 AC069282.1-201ENST00000411911 526 ntBASIC3.01□□□□□ -1.93
NUDCD3Q8IVD9 MTCO3P1-205ENST00000422088 832 ntBASIC3.01□□□□□ -1.93
NUDCD3Q8IVD9 AL390023.1-201ENST00000428836 262 ntBASIC3.01□□□□□ -1.93
NUDCD3Q8IVD9 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
NUDCD3Q8IVD9 YWHAZP7-201ENST00000436906 631 ntBASIC3.01□□□□□ -1.93
NUDCD3Q8IVD9 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.01□□□□□ -1.93
NUDCD3Q8IVD9 MTCO1P48-201ENST00000448024 1096 ntBASIC3.01□□□□□ -1.93
NUDCD3Q8IVD9 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.01□□□□□ -1.93
NUDCD3Q8IVD9 BTF3P5-201ENST00000457252 467 ntBASIC3.01□□□□□ -1.93
NUDCD3Q8IVD9 snoU13.4-201ENST00000458916 104 ntBASIC3.01□□□□□ -1.93
NUDCD3Q8IVD9 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.01□□□□□ -1.93
NUDCD3Q8IVD9 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.01□□□□□ -1.93
NUDCD3Q8IVD9 AC026403.1-201ENST00000518938 295 ntBASIC3.01□□□□□ -1.93
NUDCD3Q8IVD9 AC104417.1-201ENST00000523974 751 ntBASIC3.01□□□□□ -1.93
NUDCD3Q8IVD9 OR4P1P-201ENST00000530808 1136 ntBASIC3.01□□□□□ -1.93
NUDCD3Q8IVD9 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.01□□□□□ -1.93
NUDCD3Q8IVD9 AC090502.2-201ENST00000549267 280 ntBASIC3.01□□□□□ -1.93
NUDCD3Q8IVD9 AP001029.3-201ENST00000588063 596 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms