Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.83□□□□□ -1.8
PRPF39Q86UA1 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.83□□□□□ -1.8
PRPF39Q86UA1 AC009101.1-201ENST00000568135 242 ntBASIC3.83□□□□□ -1.8
PRPF39Q86UA1 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.83□□□□□ -1.8
PRPF39Q86UA1 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.83□□□□□ -1.8
PRPF39Q86UA1 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.83□□□□□ -1.8
PRPF39Q86UA1 AC061975.8-201ENST00000587058 721 ntBASIC3.83□□□□□ -1.8
PRPF39Q86UA1 AC106028.5-201ENST00000610332 395 ntBASIC3.83□□□□□ -1.8
PRPF39Q86UA1 AL357080.1-201ENST00000617394 239 ntBASIC3.83□□□□□ -1.8
PRPF39Q86UA1 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.83□□□□□ -1.8
PRPF39Q86UA1 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.83□□□□□ -1.8
PRPF39Q86UA1 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.83□□□□□ -1.8
PRPF39Q86UA1 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRPF39Q86UA1 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PRPF39Q86UA1 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.82□□□□□ -1.8
PRPF39Q86UA1 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.82□□□□□ -1.8
PRPF39Q86UA1 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PRPF39Q86UA1 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PRPF39Q86UA1 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRPF39Q86UA1 SNORA5A-201ENST00000384111 134 ntBASIC3.82□□□□□ -1.8
PRPF39Q86UA1 RNU6-952P-201ENST00000391164 108 ntBASIC3.82□□□□□ -1.8
PRPF39Q86UA1 AL391417.1-201ENST00000404100 426 ntBASIC3.82□□□□□ -1.8
PRPF39Q86UA1 RNU6-757P-201ENST00000410334 100 ntBASIC3.82□□□□□ -1.8
PRPF39Q86UA1 RNA5SP44-201ENST00000410446 133 ntBASIC3.82□□□□□ -1.8
PRPF39Q86UA1 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.82□□□□□ -1.8
PRPF39Q86UA1 AL035423.1-201ENST00000420331 213 ntBASIC3.82□□□□□ -1.8
PRPF39Q86UA1 BEND7P1-201ENST00000422058 457 ntBASIC3.82□□□□□ -1.8
PRPF39Q86UA1 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.82□□□□□ -1.8
PRPF39Q86UA1 NDUFB1P1-201ENST00000435191 180 ntBASIC3.82□□□□□ -1.8
PRPF39Q86UA1 RABEPKP1-201ENST00000440529 1026 ntBASIC3.82□□□□□ -1.8
PRPF39Q86UA1 SETD6P1-201ENST00000444575 317 ntBASIC3.82□□□□□ -1.8
PRPF39Q86UA1 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.82□□□□□ -1.8
PRPF39Q86UA1 AC002381.1-201ENST00000447049 280 ntBASIC3.82□□□□□ -1.8
PRPF39Q86UA1 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.82□□□□□ -1.8
PRPF39Q86UA1 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.82□□□□□ -1.8
PRPF39Q86UA1 AC234775.1-201ENST00000454247 670 ntBASIC3.82□□□□□ -1.8
PRPF39Q86UA1 AC078785.3-201ENST00000476607 425 ntBASIC3.82□□□□□ -1.8
PRPF39Q86UA1 AC021146.8-201ENST00000507455 733 ntBASIC3.82□□□□□ -1.8
PRPF39Q86UA1 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.82□□□□□ -1.8
PRPF39Q86UA1 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.82□□□□□ -1.8
PRPF39Q86UA1 SNORA31.8-201ENST00000516327 108 ntBASIC3.82□□□□□ -1.8
PRPF39Q86UA1 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.82□□□□□ -1.8
PRPF39Q86UA1 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.82□□□□□ -1.8
PRPF39Q86UA1 MIR5187-201ENST00000583479 76 ntBASIC3.82□□□□□ -1.8
PRPF39Q86UA1 AL034351.1-201ENST00000605288 668 ntBASIC3.82□□□□□ -1.8
PRPF39Q86UA1 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.82□□□□□ -1.8
PRPF39Q86UA1 AL596245.1-201ENST00000618994 362 ntBASIC3.82□□□□□ -1.8
PRPF39Q86UA1 AC079228.1-201ENST00000624774 1049 ntBASIC3.82□□□□□ -1.8
PRPF39Q86UA1 OR6C71P-202ENST00000641886 1107 ntBASIC3.82□□□□□ -1.8
PRPF39Q86UA1 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRPF39Q86UA1 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRPF39Q86UA1 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.81□□□□□ -1.8
PRPF39Q86UA1 AL645937.1-201ENST00000641739 1652 ntBASIC3.81□□□□□ -1.8
PRPF39Q86UA1 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.81□□□□□ -1.8
PRPF39Q86UA1 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRPF39Q86UA1 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRPF39Q86UA1 RNA5SP119-201ENST00000362715 117 ntBASIC3.81□□□□□ -1.8
PRPF39Q86UA1 RNU4-65P-201ENST00000410473 140 ntBASIC3.81□□□□□ -1.8
PRPF39Q86UA1 MTCYBP38-201ENST00000417160 1123 ntBASIC3.81□□□□□ -1.8
PRPF39Q86UA1 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.81□□□□□ -1.8
PRPF39Q86UA1 ZYG11AP1-201ENST00000430329 837 ntBASIC3.81□□□□□ -1.8
PRPF39Q86UA1 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PRPF39Q86UA1 AC004866.2-201ENST00000438285 481 ntBASIC3.81□□□□□ -1.8
PRPF39Q86UA1 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.81□□□□□ -1.8
PRPF39Q86UA1 RAC1P7-201ENST00000445367 377 ntBASIC3.81□□□□□ -1.8
PRPF39Q86UA1 PAXBP1P1-201ENST00000449315 447 ntBASIC3.81□□□□□ -1.8
PRPF39Q86UA1 PDSS1P2-201ENST00000449397 678 ntBASIC3.81□□□□□ -1.8
PRPF39Q86UA1 snoU13.22-201ENST00000459428 104 ntBASIC3.81□□□□□ -1.8
PRPF39Q86UA1 RPS23P3-201ENST00000470993 430 ntBASIC3.81□□□□□ -1.8
PRPF39Q86UA1 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.81□□□□□ -1.8
PRPF39Q86UA1 NIPA2P2-201ENST00000496376 1083 ntBASIC3.81□□□□□ -1.8
PRPF39Q86UA1 AC006499.5-201ENST00000505037 514 ntBASIC3.81□□□□□ -1.8
PRPF39Q86UA1 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.81□□□□□ -1.8
PRPF39Q86UA1 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.81□□□□□ -1.8
PRPF39Q86UA1 RN7SKP209-201ENST00000516888 304 ntBASIC3.81□□□□□ -1.8
PRPF39Q86UA1 DUXAP2-201ENST00000519198 589 ntBASIC3.81□□□□□ -1.8
PRPF39Q86UA1 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.81□□□□□ -1.8
PRPF39Q86UA1 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.81□□□□□ -1.8
PRPF39Q86UA1 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.81□□□□□ -1.8
PRPF39Q86UA1 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
PRPF39Q86UA1 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.81□□□□□ -1.8
PRPF39Q86UA1 OR4K8P-201ENST00000578842 1048 ntBASIC3.81□□□□□ -1.8
PRPF39Q86UA1 AL592221.1-201ENST00000605266 382 ntBASIC3.81□□□□□ -1.8
PRPF39Q86UA1 RNU1-30P-201ENST00000606575 163 ntBASIC3.81□□□□□ -1.8
PRPF39Q86UA1 AC019176.2-201ENST00000611579 315 ntBASIC3.81□□□□□ -1.8
PRPF39Q86UA1 AL590099.1-201ENST00000615276 138 ntBASIC3.81□□□□□ -1.8
PRPF39Q86UA1 AL391261.4-201ENST00000616012 481 ntBASIC3.81□□□□□ -1.8
PRPF39Q86UA1 U7.8-201ENST00000619968 63 ntBASIC3.81□□□□□ -1.8
PRPF39Q86UA1 AL353748.2-201ENST00000622148 471 ntBASIC3.81□□□□□ -1.8
PRPF39Q86UA1 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
PRPF39Q86UA1 AC009093.8-201ENST00000641769 292 ntBASIC3.81□□□□□ -1.8
PRPF39Q86UA1 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.81□□□□□ -1.8
PRPF39Q86UA1 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
PRPF39Q86UA1 AP001148.1-201ENST00000624124 2359 ntBASIC3.81□□□□□ -1.8
PRPF39Q86UA1 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PRPF39Q86UA1 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
PRPF39Q86UA1 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PRPF39Q86UA1 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PRPF39Q86UA1 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.8□□□□□ -1.8
PRPF39Q86UA1 OR5H2-201ENST00000355273 945 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms