Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.67□□□□□ -2.14
VPS13CQ709C8 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.67□□□□□ -2.14
VPS13CQ709C8 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
VPS13CQ709C8 USP9YP8-201ENST00000441913 500 ntBASIC1.67□□□□□ -2.14
VPS13CQ709C8 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.67□□□□□ -2.14
VPS13CQ709C8 AC025260.1-201ENST00000548858 430 ntBASIC1.67□□□□□ -2.14
VPS13CQ709C8 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.67□□□□□ -2.14
VPS13CQ709C8 APOOP1-201ENST00000604695 592 ntBASIC1.67□□□□□ -2.14
VPS13CQ709C8 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.67□□□□□ -2.14
VPS13CQ709C8 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
VPS13CQ709C8 MAPK10-373ENST00000641983 6772 ntBASIC1.66□□□□□ -2.14
VPS13CQ709C8 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
VPS13CQ709C8 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.66□□□□□ -2.14
VPS13CQ709C8 AL023807.1-201ENST00000407932 359 ntBASIC1.66□□□□□ -2.14
VPS13CQ709C8 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.66□□□□□ -2.14
VPS13CQ709C8 RPL21P134-201ENST00000453468 483 ntBASIC1.66□□□□□ -2.14
VPS13CQ709C8 RNU7-95P-201ENST00000459222 64 ntBASIC1.66□□□□□ -2.14
VPS13CQ709C8 AC092185.1-201ENST00000491371 97 ntBASIC1.66□□□□□ -2.14
VPS13CQ709C8 RPL23AP63-201ENST00000498752 471 ntBASIC1.66□□□□□ -2.14
VPS13CQ709C8 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC1.66□□□□□ -2.14
VPS13CQ709C8 MIR3683-201ENST00000580847 82 ntBASIC1.66□□□□□ -2.14
VPS13CQ709C8 AC068790.3-201ENST00000602988 553 ntBASIC1.66□□□□□ -2.14
VPS13CQ709C8 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC1.66□□□□□ -2.14
VPS13CQ709C8 AC103988.1-201ENST00000566382 2177 ntBASIC1.66□□□□□ -2.14
VPS13CQ709C8 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
VPS13CQ709C8 ANKRD18EP-201ENST00000405487 2632 ntBASIC1.66□□□□□ -2.14
VPS13CQ709C8 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
VPS13CQ709C8 AC002543.1-201ENST00000299783 1954 ntBASIC1.66□□□□□ -2.14
VPS13CQ709C8 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.66□□□□□ -2.14
VPS13CQ709C8 RPS7P2-201ENST00000435134 607 ntBASIC1.66□□□□□ -2.14
VPS13CQ709C8 C1GALT1P1-201ENST00000548895 1089 ntBASIC1.66□□□□□ -2.14
VPS13CQ709C8 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.66□□□□□ -2.14
VPS13CQ709C8 AC084035.1-201ENST00000634543 607 ntBASIC1.66□□□□□ -2.14
VPS13CQ709C8 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
VPS13CQ709C8 Y_RNA.327-201ENST00000365201 102 ntBASIC1.65□□□□□ -2.14
VPS13CQ709C8 MIR142-201ENST00000384835 87 ntBASIC1.65□□□□□ -2.14
VPS13CQ709C8 AC133473.1-201ENST00000455173 299 ntBASIC1.65□□□□□ -2.14
VPS13CQ709C8 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC1.65□□□□□ -2.14
VPS13CQ709C8 RNA5SP61-201ENST00000516453 100 ntBASIC1.65□□□□□ -2.14
VPS13CQ709C8 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.65□□□□□ -2.14
VPS13CQ709C8 AL160237.3-201ENST00000604114 1013 ntBASIC1.65□□□□□ -2.14
VPS13CQ709C8 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.65□□□□□ -2.14
VPS13CQ709C8 MIR8081-201ENST00000611533 95 ntBASIC1.65□□□□□ -2.14
VPS13CQ709C8 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
VPS13CQ709C8 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
VPS13CQ709C8 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.14
VPS13CQ709C8 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
VPS13CQ709C8 RNU6-342P-201ENST00000384521 104 ntBASIC1.65□□□□□ -2.15
VPS13CQ709C8 RPL23AP48-201ENST00000406913 488 ntBASIC1.65□□□□□ -2.15
VPS13CQ709C8 NDUFB4P6-201ENST00000436819 366 ntBASIC1.65□□□□□ -2.15
VPS13CQ709C8 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC1.65□□□□□ -2.15
VPS13CQ709C8 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.65□□□□□ -2.15
VPS13CQ709C8 AL359198.2-201ENST00000611836 194 ntBASIC1.65□□□□□ -2.15
VPS13CQ709C8 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
VPS13CQ709C8 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
VPS13CQ709C8 NR1H5P-201ENST00000452683 1377 ntBASIC1.65□□□□□ -2.15
VPS13CQ709C8 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
VPS13CQ709C8 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
VPS13CQ709C8 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
VPS13CQ709C8 AC008173.1-201ENST00000418901 264 ntBASIC1.65□□□□□ -2.15
VPS13CQ709C8 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.65□□□□□ -2.15
VPS13CQ709C8 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.65□□□□□ -2.15
VPS13CQ709C8 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.65□□□□□ -2.15
VPS13CQ709C8 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC1.65□□□□□ -2.15
VPS13CQ709C8 RNU6-250P-201ENST00000516958 103 ntBASIC1.65□□□□□ -2.15
VPS13CQ709C8 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC1.65□□□□□ -2.15
VPS13CQ709C8 AC006116.7-201ENST00000590141 756 ntBASIC1.65□□□□□ -2.15
VPS13CQ709C8 AC002076.2-201ENST00000617362 122 ntBASIC1.65□□□□□ -2.15
VPS13CQ709C8 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
VPS13CQ709C8 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
VPS13CQ709C8 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
VPS13CQ709C8 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
VPS13CQ709C8 AC090543.1-201ENST00000492168 485 ntBASIC1.64□□□□□ -2.15
VPS13CQ709C8 RNA5SP220-201ENST00000516298 104 ntBASIC1.64□□□□□ -2.15
VPS13CQ709C8 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC1.64□□□□□ -2.15
VPS13CQ709C8 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC1.64□□□□□ -2.15
VPS13CQ709C8 OR5D17P-201ENST00000531492 978 ntBASIC1.64□□□□□ -2.15
VPS13CQ709C8 CBX3P4-201ENST00000538909 354 ntBASIC1.64□□□□□ -2.15
VPS13CQ709C8 MIR4452-201ENST00000583004 71 ntBASIC1.64□□□□□ -2.15
VPS13CQ709C8 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC1.64□□□□□ -2.15
VPS13CQ709C8 AC126118.1-201ENST00000607744 628 ntBASIC1.64□□□□□ -2.15
VPS13CQ709C8 AC097634.1-201ENST00000604491 2467 ntBASIC1.64□□□□□ -2.15
VPS13CQ709C8 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.64□□□□□ -2.15
VPS13CQ709C8 RNU6-316P-201ENST00000391027 107 ntBASIC1.64□□□□□ -2.15
VPS13CQ709C8 AC025946.2-201ENST00000603398 234 ntBASIC1.64□□□□□ -2.15
VPS13CQ709C8 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
VPS13CQ709C8 AC012498.1-201ENST00000424037 437 ntBASIC1.64□□□□□ -2.15
VPS13CQ709C8 AL121594.1-201ENST00000475906 575 ntBASIC1.64□□□□□ -2.15
VPS13CQ709C8 AL163540.1-201ENST00000485382 386 ntBASIC1.64□□□□□ -2.15
VPS13CQ709C8 AC091515.1-201ENST00000548110 679 ntBASIC1.64□□□□□ -2.15
VPS13CQ709C8 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC1.64□□□□□ -2.15
VPS13CQ709C8 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC1.64□□□□□ -2.15
VPS13CQ709C8 MIR96-201ENST00000362288 78 ntBASIC1.63□□□□□ -2.15
VPS13CQ709C8 HMGB1P11-201ENST00000413899 637 ntBASIC1.63□□□□□ -2.15
VPS13CQ709C8 RAC1P3-201ENST00000416129 580 ntBASIC1.63□□□□□ -2.15
VPS13CQ709C8 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.63□□□□□ -2.15
VPS13CQ709C8 OR4P1P-201ENST00000530808 1136 ntBASIC1.63□□□□□ -2.15
VPS13CQ709C8 AC010680.1-201ENST00000590024 3590 ntBASIC1.63□□□□□ -2.15
VPS13CQ709C8 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC1.63□□□□□ -2.15
VPS13CQ709C8 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms