Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 MIR3913-1-201ENST00000577744 102 ntBASIC4.43□□□□□ -1.7
PPP4R4Q6NUP7 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.43□□□□□ -1.7
PPP4R4Q6NUP7 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.43□□□□□ -1.7
PPP4R4Q6NUP7 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.43□□□□□ -1.7
PPP4R4Q6NUP7 AC008638.3-201ENST00000603341 463 ntBASIC4.43□□□□□ -1.7
PPP4R4Q6NUP7 AL139395.1-201ENST00000603662 160 ntBASIC4.43□□□□□ -1.7
PPP4R4Q6NUP7 AC004067.1-201ENST00000608733 700 ntBASIC4.43□□□□□ -1.7
PPP4R4Q6NUP7 AL589743.7-201ENST00000612637 233 ntBASIC4.43□□□□□ -1.7
PPP4R4Q6NUP7 AL110115.1-201ENST00000614396 364 ntBASIC4.43□□□□□ -1.7
PPP4R4Q6NUP7 AC008121.2-201ENST00000614647 523 ntBASIC4.43□□□□□ -1.7
PPP4R4Q6NUP7 AC008250.2-201ENST00000615261 205 ntBASIC4.43□□□□□ -1.7
PPP4R4Q6NUP7 AC091953.2-201ENST00000623979 160 ntBASIC4.43□□□□□ -1.7
PPP4R4Q6NUP7 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.43□□□□□ -1.7
PPP4R4Q6NUP7 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.43□□□□□ -1.7
PPP4R4Q6NUP7 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
PPP4R4Q6NUP7 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PPP4R4Q6NUP7 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PPP4R4Q6NUP7 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
PPP4R4Q6NUP7 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.43□□□□□ -1.7
PPP4R4Q6NUP7 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.43□□□□□ -1.7
PPP4R4Q6NUP7 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PPP4R4Q6NUP7 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 TBCAP2-201ENST00000416175 326 ntBASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 AC009961.2-201ENST00000435771 251 ntBASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 AL353748.1-201ENST00000440753 474 ntBASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 RPL21P89-201ENST00000444021 467 ntBASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 SLC25A18P1-201ENST00000449385 454 ntBASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 RPL7P16-201ENST00000479738 738 ntBASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 RPL23AP41-201ENST00000484754 458 ntBASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 AC135721.1-201ENST00000497954 479 ntBASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 MTND2P33-201ENST00000506452 1031 ntBASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 MRPS33P2-201ENST00000507850 322 ntBASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 RNU6-405P-201ENST00000516637 110 ntBASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 AP000907.2-201ENST00000530827 353 ntBASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 AC022880.1-201ENST00000534017 973 ntBASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 AC005832.2-201ENST00000538921 1430 ntBASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 AC093249.4-201ENST00000564755 259 ntBASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 AC105224.1-201ENST00000587055 421 ntBASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 AC068790.5-201ENST00000602741 355 ntBASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 AC090578.1-201ENST00000604955 591 ntBASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 AC012557.2-201ENST00000605919 418 ntBASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 AL451064.1-201ENST00000607718 471 ntBASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 FAM25E-202ENST00000608562 189 ntBASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 AL049539.1-201ENST00000611964 459 ntBASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 Z99129.1-201ENST00000612510 255 ntBASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 AC093838.1-201ENST00000613014 469 ntBASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 AP001506.1-201ENST00000615444 211 ntBASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 AC108479.2-201ENST00000617314 601 ntBASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 AC138932.5-201ENST00000617759 563 ntBASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 AL022401.1-201ENST00000619498 108 ntBASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 AC091953.3-201ENST00000623220 236 ntBASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 AC098679.4-201ENST00000624241 654 ntBASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 AC092326.2-201ENST00000624772 1561 ntBASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 AL159972.1-201ENST00000625150 448 ntBASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 AC019226.1-201ENST00000625666 515 ntBASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PPP4R4Q6NUP7 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 AL109941.1-201ENST00000401925 229 ntBASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 RN7SKP167-201ENST00000411047 285 ntBASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 MTCO3P41-201ENST00000414801 328 ntBASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 YPEL5P1-201ENST00000419731 367 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms