Protein–RNA interactions for Protein: Q52LD8

RFTN2, Raftlin-2, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN2Q52LD8 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.29□□□□□ -1.88
RFTN2Q52LD8 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.29□□□□□ -1.88
RFTN2Q52LD8 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.29□□□□□ -1.88
RFTN2Q52LD8 AL445669.2-201ENST00000454425 421 ntBASIC3.29□□□□□ -1.88
RFTN2Q52LD8 CFTRP1-201ENST00000456646 183 ntBASIC3.29□□□□□ -1.88
RFTN2Q52LD8 RNU7-136P-201ENST00000458819 69 ntBASIC3.29□□□□□ -1.88
RFTN2Q52LD8 AC097493.1-201ENST00000463958 372 ntBASIC3.29□□□□□ -1.88
RFTN2Q52LD8 CENPBD1P1-201ENST00000464061 469 ntBASIC3.29□□□□□ -1.88
RFTN2Q52LD8 SNRPGP3-201ENST00000469405 227 ntBASIC3.29□□□□□ -1.88
RFTN2Q52LD8 RPS4XP22-201ENST00000480755 780 ntBASIC3.29□□□□□ -1.88
RFTN2Q52LD8 HSPE1P23-201ENST00000509838 286 ntBASIC3.29□□□□□ -1.88
RFTN2Q52LD8 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.29□□□□□ -1.88
RFTN2Q52LD8 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.29□□□□□ -1.88
RFTN2Q52LD8 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.29□□□□□ -1.88
RFTN2Q52LD8 AC107934.2-201ENST00000518653 310 ntBASIC3.29□□□□□ -1.88
RFTN2Q52LD8 AC105185.1-201ENST00000518705 535 ntBASIC3.29□□□□□ -1.88
RFTN2Q52LD8 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.29□□□□□ -1.88
RFTN2Q52LD8 OR4P1P-201ENST00000530808 1136 ntBASIC3.29□□□□□ -1.88
RFTN2Q52LD8 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.29□□□□□ -1.88
RFTN2Q52LD8 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.29□□□□□ -1.88
RFTN2Q52LD8 MIR3160-1-201ENST00000577972 85 ntBASIC3.29□□□□□ -1.88
RFTN2Q52LD8 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.29□□□□□ -1.88
RFTN2Q52LD8 AC008507.1-201ENST00000587506 734 ntBASIC3.29□□□□□ -1.88
RFTN2Q52LD8 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.29□□□□□ -1.88
RFTN2Q52LD8 AC022146.1-201ENST00000595307 847 ntBASIC3.29□□□□□ -1.88
RFTN2Q52LD8 SNRPGP15-201ENST00000600149 222 ntBASIC3.29□□□□□ -1.88
RFTN2Q52LD8 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.29□□□□□ -1.88
RFTN2Q52LD8 RPL23AP92-201ENST00000603609 255 ntBASIC3.29□□□□□ -1.88
RFTN2Q52LD8 MIR7851-201ENST00000610611 160 ntBASIC3.29□□□□□ -1.88
RFTN2Q52LD8 CR381572.1-201ENST00000625098 102 ntBASIC3.29□□□□□ -1.88
RFTN2Q52LD8 MIR7153-201ENST00000637758 57 ntBASIC3.29□□□□□ -1.88
RFTN2Q52LD8 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RFTN2Q52LD8 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RFTN2Q52LD8 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RFTN2Q52LD8 AL645937.1-201ENST00000641739 1652 ntBASIC3.28□□□□□ -1.88
RFTN2Q52LD8 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
RFTN2Q52LD8 RNA5SP189-201ENST00000364920 115 ntBASIC3.28□□□□□ -1.88
RFTN2Q52LD8 RNU6-878P-201ENST00000384578 110 ntBASIC3.28□□□□□ -1.88
RFTN2Q52LD8 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
RFTN2Q52LD8 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
RFTN2Q52LD8 RNU2-15P-201ENST00000410692 191 ntBASIC3.28□□□□□ -1.88
RFTN2Q52LD8 USP9YP33-201ENST00000412220 421 ntBASIC3.28□□□□□ -1.88
RFTN2Q52LD8 AC126124.2-201ENST00000413542 321 ntBASIC3.28□□□□□ -1.88
RFTN2Q52LD8 Z99755.1-201ENST00000414048 380 ntBASIC3.28□□□□□ -1.88
RFTN2Q52LD8 AC093578.1-201ENST00000415219 368 ntBASIC3.28□□□□□ -1.88
RFTN2Q52LD8 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.28□□□□□ -1.88
RFTN2Q52LD8 AC012065.2-201ENST00000421295 375 ntBASIC3.28□□□□□ -1.88
RFTN2Q52LD8 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.28□□□□□ -1.88
RFTN2Q52LD8 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.28□□□□□ -1.88
RFTN2Q52LD8 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.28□□□□□ -1.88
RFTN2Q52LD8 USP9YP35-201ENST00000435696 412 ntBASIC3.28□□□□□ -1.88
RFTN2Q52LD8 RPL23AP74-201ENST00000437246 471 ntBASIC3.28□□□□□ -1.88
RFTN2Q52LD8 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RFTN2Q52LD8 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.28□□□□□ -1.88
RFTN2Q52LD8 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.28□□□□□ -1.88
RFTN2Q52LD8 NPM1P49-201ENST00000448027 714 ntBASIC3.28□□□□□ -1.88
RFTN2Q52LD8 RSL24D1P3-201ENST00000449255 495 ntBASIC3.28□□□□□ -1.88
RFTN2Q52LD8 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.28□□□□□ -1.88
RFTN2Q52LD8 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.28□□□□□ -1.88
RFTN2Q52LD8 HMGB1P25-201ENST00000468402 607 ntBASIC3.28□□□□□ -1.88
RFTN2Q52LD8 AC078785.3-201ENST00000476607 425 ntBASIC3.28□□□□□ -1.88
RFTN2Q52LD8 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.28□□□□□ -1.88
RFTN2Q52LD8 AC090453.1-201ENST00000495560 436 ntBASIC3.28□□□□□ -1.88
RFTN2Q52LD8 AC078918.1-201ENST00000498515 228 ntBASIC3.28□□□□□ -1.88
RFTN2Q52LD8 AC021146.5-201ENST00000503544 545 ntBASIC3.28□□□□□ -1.88
RFTN2Q52LD8 AC114981.1-201ENST00000503897 678 ntBASIC3.28□□□□□ -1.88
RFTN2Q52LD8 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.28□□□□□ -1.88
RFTN2Q52LD8 AC093281.2-201ENST00000510153 597 ntBASIC3.28□□□□□ -1.88
RFTN2Q52LD8 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RFTN2Q52LD8 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.28□□□□□ -1.88
RFTN2Q52LD8 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.28□□□□□ -1.88
RFTN2Q52LD8 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.28□□□□□ -1.88
RFTN2Q52LD8 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.28□□□□□ -1.88
RFTN2Q52LD8 AC009094.1-201ENST00000564443 426 ntBASIC3.28□□□□□ -1.88
RFTN2Q52LD8 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.28□□□□□ -1.88
RFTN2Q52LD8 AL353778.1-201ENST00000603149 408 ntBASIC3.28□□□□□ -1.88
RFTN2Q52LD8 DPRXP5-201ENST00000604662 539 ntBASIC3.28□□□□□ -1.88
RFTN2Q52LD8 AL592221.1-201ENST00000605266 382 ntBASIC3.28□□□□□ -1.88
RFTN2Q52LD8 AC112220.3-201ENST00000605502 502 ntBASIC3.28□□□□□ -1.88
RFTN2Q52LD8 BX323046.1-201ENST00000610145 535 ntBASIC3.28□□□□□ -1.88
RFTN2Q52LD8 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.28□□□□□ -1.88
RFTN2Q52LD8 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.28□□□□□ -1.88
RFTN2Q52LD8 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.28□□□□□ -1.88
RFTN2Q52LD8 AC017037.3-201ENST00000625016 472 ntBASIC3.28□□□□□ -1.88
RFTN2Q52LD8 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RFTN2Q52LD8 U6.98-201ENST00000637157 84 ntBASIC3.28□□□□□ -1.88
RFTN2Q52LD8 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.28□□□□□ -1.88
RFTN2Q52LD8 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RFTN2Q52LD8 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RFTN2Q52LD8 AL022578.1-201ENST00000439330 1433 ntBASIC3.27□□□□□ -1.89
RFTN2Q52LD8 MTND4P34-201ENST00000572715 1371 ntBASIC3.27□□□□□ -1.89
RFTN2Q52LD8 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RFTN2Q52LD8 AC017071.1-201ENST00000564407 2204 ntBASIC3.27□□□□□ -1.89
RFTN2Q52LD8 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
RFTN2Q52LD8 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
RFTN2Q52LD8 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
RFTN2Q52LD8 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
RFTN2Q52LD8 RN7SKP227-201ENST00000364445 330 ntBASIC3.27□□□□□ -1.89
RFTN2Q52LD8 RNU6-335P-201ENST00000364563 113 ntBASIC3.27□□□□□ -1.89
RFTN2Q52LD8 RNU6-343P-201ENST00000364709 104 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms