Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AC244505.4-201ENST00000434905 287 ntBASIC3□□□□□ -1.93
PTPN20Q4JDL3 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3□□□□□ -1.93
PTPN20Q4JDL3 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3□□□□□ -1.93
PTPN20Q4JDL3 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3□□□□□ -1.93
PTPN20Q4JDL3 SSXP5-201ENST00000443473 287 ntBASIC3□□□□□ -1.93
PTPN20Q4JDL3 MOB1AP2-201ENST00000446060 614 ntBASIC3□□□□□ -1.93
PTPN20Q4JDL3 AL096829.2-201ENST00000446582 742 ntBASIC3□□□□□ -1.93
PTPN20Q4JDL3 AL050341.1-201ENST00000447743 313 ntBASIC3□□□□□ -1.93
PTPN20Q4JDL3 NANOGNBP1-201ENST00000448444 480 ntBASIC3□□□□□ -1.93
PTPN20Q4JDL3 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3□□□□□ -1.93
PTPN20Q4JDL3 AC140076.1-201ENST00000449897 361 ntBASIC3□□□□□ -1.93
PTPN20Q4JDL3 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3□□□□□ -1.93
PTPN20Q4JDL3 AC080014.1-201ENST00000496877 1201 ntBASIC3□□□□□ -1.93
PTPN20Q4JDL3 MTCO2P9-201ENST00000503214 694 ntBASIC3□□□□□ -1.93
PTPN20Q4JDL3 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3□□□□□ -1.93
PTPN20Q4JDL3 RNA5SP385-201ENST00000515947 110 ntBASIC3□□□□□ -1.93
PTPN20Q4JDL3 RNU6-711P-201ENST00000517255 106 ntBASIC3□□□□□ -1.93
PTPN20Q4JDL3 AC113192.3-201ENST00000529152 742 ntBASIC3□□□□□ -1.93
PTPN20Q4JDL3 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3□□□□□ -1.93
PTPN20Q4JDL3 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3□□□□□ -1.93
PTPN20Q4JDL3 AC087481.2-201ENST00000565492 330 ntBASIC3□□□□□ -1.93
PTPN20Q4JDL3 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3□□□□□ -1.93
PTPN20Q4JDL3 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3□□□□□ -1.93
PTPN20Q4JDL3 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3□□□□□ -1.93
PTPN20Q4JDL3 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3□□□□□ -1.93
PTPN20Q4JDL3 AC024153.1-201ENST00000603103 365 ntBASIC3□□□□□ -1.93
PTPN20Q4JDL3 AC098483.2-201ENST00000603158 454 ntBASIC3□□□□□ -1.93
PTPN20Q4JDL3 HSPE1P14-201ENST00000605812 302 ntBASIC3□□□□□ -1.93
PTPN20Q4JDL3 AC026741.1-201ENST00000605892 482 ntBASIC3□□□□□ -1.93
PTPN20Q4JDL3 AC010338.1-201ENST00000621823 717 ntBASIC3□□□□□ -1.93
PTPN20Q4JDL3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3□□□□□ -1.93
PTPN20Q4JDL3 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3□□□□□ -1.93
PTPN20Q4JDL3 MTND5P31-201ENST00000419366 1374 ntBASIC3□□□□□ -1.93
PTPN20Q4JDL3 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 MAPK10-322ENST00000641485 4530 ntBASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 AC092593.1-201ENST00000515413 1815 ntBASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 RNA5SP258-201ENST00000362750 119 ntBASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 RNU6-989P-201ENST00000362756 107 ntBASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 Y_RNA.110-201ENST00000363220 99 ntBASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 SNORA18.3-201ENST00000384122 132 ntBASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 RNU6-761P-201ENST00000384148 107 ntBASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 MIR525-201ENST00000384978 85 ntBASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 HSFY1P1-201ENST00000423928 1178 ntBASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 CYCSP32-201ENST00000440548 321 ntBASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 AL592437.1-201ENST00000443781 492 ntBASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 snoU13.4-201ENST00000458916 104 ntBASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 AC108860.1-201ENST00000484521 383 ntBASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 AC011825.1-201ENST00000484967 388 ntBASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 AC104057.1-201ENST00000515547 497 ntBASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 SCARNA13-201ENST00000516672 275 ntBASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 AC019227.1-201ENST00000526902 510 ntBASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 AC011611.5-201ENST00000552477 578 ntBASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 SNORD84-203ENST00000584275 78 ntBASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 AC092474.3-201ENST00000603022 568 ntBASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 AP002906.1-201ENST00000603405 233 ntBASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 AC112503.2-201ENST00000609005 552 ntBASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 AP001002.2-201ENST00000625137 386 ntBASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PTPN20Q4JDL3 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
PTPN20Q4JDL3 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PTPN20Q4JDL3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PTPN20Q4JDL3 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.98□□□□□ -1.93
PTPN20Q4JDL3 AL355578.1-201ENST00000607405 1328 ntBASIC2.98□□□□□ -1.93
PTPN20Q4JDL3 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PTPN20Q4JDL3 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PTPN20Q4JDL3 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.98□□□□□ -1.93
PTPN20Q4JDL3 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.98□□□□□ -1.93
PTPN20Q4JDL3 RNU6-354P-201ENST00000383862 107 ntBASIC2.98□□□□□ -1.93
PTPN20Q4JDL3 RNU6-444P-201ENST00000383988 108 ntBASIC2.98□□□□□ -1.93
PTPN20Q4JDL3 RNU6-610P-201ENST00000384264 107 ntBASIC2.98□□□□□ -1.93
PTPN20Q4JDL3 MIR16-1-201ENST00000385271 89 ntBASIC2.98□□□□□ -1.93
PTPN20Q4JDL3 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.98□□□□□ -1.93
PTPN20Q4JDL3 RNU4-65P-201ENST00000410473 140 ntBASIC2.98□□□□□ -1.93
PTPN20Q4JDL3 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.98□□□□□ -1.93
PTPN20Q4JDL3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.98□□□□□ -1.93
PTPN20Q4JDL3 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC2.98□□□□□ -1.93
PTPN20Q4JDL3 UBE2D3P2-201ENST00000424409 445 ntBASIC2.98□□□□□ -1.93
PTPN20Q4JDL3 DPPA2P1-201ENST00000428060 556 ntBASIC2.98□□□□□ -1.93
PTPN20Q4JDL3 AC002542.1-201ENST00000440683 193 ntBASIC2.98□□□□□ -1.93
PTPN20Q4JDL3 GXYLT1P1-201ENST00000446657 490 ntBASIC2.98□□□□□ -1.93
PTPN20Q4JDL3 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.98□□□□□ -1.93
PTPN20Q4JDL3 AC003982.1-202ENST00000469928 248 ntBASIC2.98□□□□□ -1.93
PTPN20Q4JDL3 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.98□□□□□ -1.93
PTPN20Q4JDL3 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms