Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 RPL7P38-201ENST00000488396 739 ntBASIC4.04□□□□□ -1.76
PDS5AQ29RF7 FCF1P3-201ENST00000496394 590 ntBASIC4.04□□□□□ -1.76
PDS5AQ29RF7 AC147055.4-201ENST00000504399 745 ntBASIC4.04□□□□□ -1.76
PDS5AQ29RF7 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.04□□□□□ -1.76
PDS5AQ29RF7 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.04□□□□□ -1.76
PDS5AQ29RF7 APOOP4-201ENST00000513530 597 ntBASIC4.04□□□□□ -1.76
PDS5AQ29RF7 RNU6-488P-201ENST00000515918 99 ntBASIC4.04□□□□□ -1.76
PDS5AQ29RF7 RNU6-1261P-201ENST00000517194 104 ntBASIC4.04□□□□□ -1.76
PDS5AQ29RF7 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.04□□□□□ -1.76
PDS5AQ29RF7 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.04□□□□□ -1.76
PDS5AQ29RF7 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.04□□□□□ -1.76
PDS5AQ29RF7 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.04□□□□□ -1.76
PDS5AQ29RF7 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.04□□□□□ -1.76
PDS5AQ29RF7 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.04□□□□□ -1.76
PDS5AQ29RF7 AL358072.1-201ENST00000604156 575 ntBASIC4.04□□□□□ -1.76
PDS5AQ29RF7 AL022161.1-201ENST00000604390 213 ntBASIC4.04□□□□□ -1.76
PDS5AQ29RF7 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.04□□□□□ -1.76
PDS5AQ29RF7 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.04□□□□□ -1.76
PDS5AQ29RF7 SNORD39.4-201ENST00000620099 78 ntBASIC4.04□□□□□ -1.76
PDS5AQ29RF7 AC026634.1-201ENST00000634369 198 ntBASIC4.04□□□□□ -1.76
PDS5AQ29RF7 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PDS5AQ29RF7 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.04□□□□□ -1.76
PDS5AQ29RF7 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PDS5AQ29RF7 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PDS5AQ29RF7 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PDS5AQ29RF7 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
PDS5AQ29RF7 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PDS5AQ29RF7 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
PDS5AQ29RF7 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PDS5AQ29RF7 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.04□□□□□ -1.76
PDS5AQ29RF7 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PDS5AQ29RF7 AL118496.1-201ENST00000440201 1812 ntBASIC4.03□□□□□ -1.76
PDS5AQ29RF7 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PDS5AQ29RF7 RNU6-251P-201ENST00000363235 104 ntBASIC4.03□□□□□ -1.76
PDS5AQ29RF7 SNORA38.1-201ENST00000364172 131 ntBASIC4.03□□□□□ -1.76
PDS5AQ29RF7 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.03□□□□□ -1.76
PDS5AQ29RF7 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.03□□□□□ -1.76
PDS5AQ29RF7 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.03□□□□□ -1.76
PDS5AQ29RF7 AC009237.2-201ENST00000421358 284 ntBASIC4.03□□□□□ -1.76
PDS5AQ29RF7 BX119904.4-201ENST00000424402 301 ntBASIC4.03□□□□□ -1.76
PDS5AQ29RF7 AL512649.1-201ENST00000428997 581 ntBASIC4.03□□□□□ -1.76
PDS5AQ29RF7 AL353705.1-201ENST00000433468 480 ntBASIC4.03□□□□□ -1.76
PDS5AQ29RF7 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.03□□□□□ -1.76
PDS5AQ29RF7 NF1P3-201ENST00000457709 450 ntBASIC4.03□□□□□ -1.76
PDS5AQ29RF7 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
PDS5AQ29RF7 S100A11P1-201ENST00000477525 312 ntBASIC4.03□□□□□ -1.76
PDS5AQ29RF7 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.03□□□□□ -1.76
PDS5AQ29RF7 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.03□□□□□ -1.76
PDS5AQ29RF7 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.03□□□□□ -1.76
PDS5AQ29RF7 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.03□□□□□ -1.76
PDS5AQ29RF7 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.03□□□□□ -1.76
PDS5AQ29RF7 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.03□□□□□ -1.76
PDS5AQ29RF7 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.03□□□□□ -1.76
PDS5AQ29RF7 VN1R79P-201ENST00000593540 513 ntBASIC4.03□□□□□ -1.76
PDS5AQ29RF7 AC008687.2-201ENST00000597865 520 ntBASIC4.03□□□□□ -1.76
PDS5AQ29RF7 AC006539.2-201ENST00000601729 572 ntBASIC4.03□□□□□ -1.76
PDS5AQ29RF7 AC105129.3-201ENST00000605455 485 ntBASIC4.03□□□□□ -1.76
PDS5AQ29RF7 AC245008.1-201ENST00000608123 476 ntBASIC4.03□□□□□ -1.76
PDS5AQ29RF7 AC072039.2-201ENST00000608883 439 ntBASIC4.03□□□□□ -1.76
PDS5AQ29RF7 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PDS5AQ29RF7 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
PDS5AQ29RF7 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PDS5AQ29RF7 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.03□□□□□ -1.76
PDS5AQ29RF7 AC118273.1-201ENST00000525324 3006 ntBASIC4.03□□□□□ -1.76
PDS5AQ29RF7 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PDS5AQ29RF7 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
PDS5AQ29RF7 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PDS5AQ29RF7 AC021755.1-201ENST00000559747 1447 ntBASIC4.03□□□□□ -1.76
PDS5AQ29RF7 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
PDS5AQ29RF7 AC107982.1-201ENST00000507171 1300 ntBASIC4.03□□□□□ -1.76
PDS5AQ29RF7 PHKBP1-201ENST00000450951 1951 ntBASIC4.03□□□□□ -1.77
PDS5AQ29RF7 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
PDS5AQ29RF7 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PDS5AQ29RF7 AL445523.1-201ENST00000451184 1362 ntBASIC4.02□□□□□ -1.77
PDS5AQ29RF7 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
PDS5AQ29RF7 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PDS5AQ29RF7 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PDS5AQ29RF7 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PDS5AQ29RF7 RNU6-553P-201ENST00000364047 96 ntBASIC4.02□□□□□ -1.77
PDS5AQ29RF7 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PDS5AQ29RF7 RNA5SP229-201ENST00000410809 99 ntBASIC4.02□□□□□ -1.77
PDS5AQ29RF7 AC068533.2-201ENST00000411872 306 ntBASIC4.02□□□□□ -1.77
PDS5AQ29RF7 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.02□□□□□ -1.77
PDS5AQ29RF7 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.02□□□□□ -1.77
PDS5AQ29RF7 SEPT2P1-201ENST00000419651 180 ntBASIC4.02□□□□□ -1.77
PDS5AQ29RF7 AL159169.1-201ENST00000421119 127 ntBASIC4.02□□□□□ -1.77
PDS5AQ29RF7 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.02□□□□□ -1.77
PDS5AQ29RF7 AC012065.2-201ENST00000421295 375 ntBASIC4.02□□□□□ -1.77
PDS5AQ29RF7 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.02□□□□□ -1.77
PDS5AQ29RF7 RPL31P54-201ENST00000429803 370 ntBASIC4.02□□□□□ -1.77
PDS5AQ29RF7 VN1R108P-201ENST00000431580 830 ntBASIC4.02□□□□□ -1.77
PDS5AQ29RF7 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
PDS5AQ29RF7 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.02□□□□□ -1.77
PDS5AQ29RF7 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.02□□□□□ -1.77
PDS5AQ29RF7 AC091862.1-201ENST00000438016 1100 ntBASIC4.02□□□□□ -1.77
PDS5AQ29RF7 ISCA1P2-201ENST00000438679 421 ntBASIC4.02□□□□□ -1.77
PDS5AQ29RF7 MTND2P4-201ENST00000445034 1004 ntBASIC4.02□□□□□ -1.77
PDS5AQ29RF7 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.02□□□□□ -1.77
PDS5AQ29RF7 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PDS5AQ29RF7 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms