Protein–RNA interactions for Protein: Q12770

SCAP, Sterol regulatory element-binding protein cleavage-activating protein, humanhuman

Predictions only

Length 1,279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPQ12770 AC004009.2-201ENST00000623016 728 ntBASIC4.55□□□□□ -1.68
SCAPQ12770 AC000123.2-201ENST00000623124 461 ntBASIC4.55□□□□□ -1.68
SCAPQ12770 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.55□□□□□ -1.68
SCAPQ12770 MIR4496-201ENST00000635896 61 ntBASIC4.55□□□□□ -1.68
SCAPQ12770 AC099654.10-201ENST00000640395 161 ntBASIC4.55□□□□□ -1.68
SCAPQ12770 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SCAPQ12770 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
SCAPQ12770 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SCAPQ12770 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
SCAPQ12770 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.55□□□□□ -1.68
SCAPQ12770 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
SCAPQ12770 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
SCAPQ12770 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SCAPQ12770 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.55□□□□□ -1.68
SCAPQ12770 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SCAPQ12770 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SCAPQ12770 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.54□□□□□ -1.68
SCAPQ12770 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.54□□□□□ -1.68
SCAPQ12770 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.54□□□□□ -1.68
SCAPQ12770 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.54□□□□□ -1.68
SCAPQ12770 OR11H5P-202ENST00000641612 1325 ntBASIC4.54□□□□□ -1.68
SCAPQ12770 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SCAPQ12770 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.54□□□□□ -1.68
SCAPQ12770 EIF5P1-201ENST00000400019 1231 ntBASIC4.54□□□□□ -1.68
SCAPQ12770 HMGB1P17-201ENST00000403495 628 ntBASIC4.54□□□□□ -1.68
SCAPQ12770 AL024474.1-201ENST00000404655 591 ntBASIC4.54□□□□□ -1.68
SCAPQ12770 SNRPFP1-201ENST00000414761 252 ntBASIC4.54□□□□□ -1.68
SCAPQ12770 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.54□□□□□ -1.68
SCAPQ12770 SPA17P1-201ENST00000416656 452 ntBASIC4.54□□□□□ -1.68
SCAPQ12770 BX295541.1-201ENST00000417774 250 ntBASIC4.54□□□□□ -1.68
SCAPQ12770 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.54□□□□□ -1.68
SCAPQ12770 AC073464.1-201ENST00000429823 534 ntBASIC4.54□□□□□ -1.68
SCAPQ12770 USP9YP8-201ENST00000441913 500 ntBASIC4.54□□□□□ -1.68
SCAPQ12770 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.54□□□□□ -1.68
SCAPQ12770 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.54□□□□□ -1.68
SCAPQ12770 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.54□□□□□ -1.68
SCAPQ12770 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.54□□□□□ -1.68
SCAPQ12770 MTCO3P20-201ENST00000454926 688 ntBASIC4.54□□□□□ -1.68
SCAPQ12770 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.54□□□□□ -1.68
SCAPQ12770 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.54□□□□□ -1.68
SCAPQ12770 RPS15AP17-201ENST00000470598 390 ntBASIC4.54□□□□□ -1.68
SCAPQ12770 RN7SL810P-201ENST00000493031 276 ntBASIC4.54□□□□□ -1.68
SCAPQ12770 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.54□□□□□ -1.68
SCAPQ12770 OR5H5P-201ENST00000503164 928 ntBASIC4.54□□□□□ -1.68
SCAPQ12770 AC105914.1-201ENST00000511798 226 ntBASIC4.54□□□□□ -1.68
SCAPQ12770 AC021146.3-201ENST00000511911 260 ntBASIC4.54□□□□□ -1.68
SCAPQ12770 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.54□□□□□ -1.68
SCAPQ12770 IGLVIV-65-201ENST00000517313 360 ntBASIC4.54□□□□□ -1.68
SCAPQ12770 AC104383.1-201ENST00000530297 370 ntBASIC4.54□□□□□ -1.68
SCAPQ12770 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.54□□□□□ -1.68
SCAPQ12770 OR8R1P-201ENST00000543943 764 ntBASIC4.54□□□□□ -1.68
SCAPQ12770 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.54□□□□□ -1.68
SCAPQ12770 CENPUP2-201ENST00000555897 1186 ntBASIC4.54□□□□□ -1.68
SCAPQ12770 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.54□□□□□ -1.68
SCAPQ12770 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.54□□□□□ -1.68
SCAPQ12770 YWHAQP7-201ENST00000603536 658 ntBASIC4.54□□□□□ -1.68
SCAPQ12770 BNIP3P9-201ENST00000603714 553 ntBASIC4.54□□□□□ -1.68
SCAPQ12770 AL139286.1-201ENST00000604465 483 ntBASIC4.54□□□□□ -1.68
SCAPQ12770 AC009994.1-201ENST00000606889 253 ntBASIC4.54□□□□□ -1.68
SCAPQ12770 RNU4-89P-201ENST00000607443 133 ntBASIC4.54□□□□□ -1.68
SCAPQ12770 uc_338.13-201ENST00000618243 179 ntBASIC4.54□□□□□ -1.68
SCAPQ12770 U6.101-201ENST00000637707 76 ntBASIC4.54□□□□□ -1.68
SCAPQ12770 ZNF33CP-201ENST00000432492 2030 ntBASIC4.54□□□□□ -1.68
SCAPQ12770 NEAT1-202ENST00000501122 22743 ntBASIC4.54□□□□□ -1.68
SCAPQ12770 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SCAPQ12770 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
SCAPQ12770 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
SCAPQ12770 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.54□□□□□ -1.68
SCAPQ12770 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.54□□□□□ -1.68
SCAPQ12770 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.54□□□□□ -1.68
SCAPQ12770 Z95327.2-201ENST00000414579 1873 ntBASIC4.54□□□□□ -1.68
SCAPQ12770 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
SCAPQ12770 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SCAPQ12770 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.53□□□□□ -1.68
SCAPQ12770 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SCAPQ12770 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
SCAPQ12770 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SCAPQ12770 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.53□□□□□ -1.68
SCAPQ12770 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SCAPQ12770 RNU6-525P-201ENST00000363685 104 ntBASIC4.53□□□□□ -1.68
SCAPQ12770 RNY4P34-201ENST00000364779 95 ntBASIC4.53□□□□□ -1.68
SCAPQ12770 Y_RNA.295-201ENST00000364918 102 ntBASIC4.53□□□□□ -1.68
SCAPQ12770 RNU6-1011P-201ENST00000384668 107 ntBASIC4.53□□□□□ -1.68
SCAPQ12770 AC016769.3-201ENST00000396562 315 ntBASIC4.53□□□□□ -1.68
SCAPQ12770 ARF4P3-201ENST00000397387 509 ntBASIC4.53□□□□□ -1.68
SCAPQ12770 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SCAPQ12770 RN7SKP202-201ENST00000410439 330 ntBASIC4.53□□□□□ -1.68
SCAPQ12770 RPS20P14-201ENST00000412545 360 ntBASIC4.53□□□□□ -1.68
SCAPQ12770 CYCSP10-201ENST00000417973 294 ntBASIC4.53□□□□□ -1.68
SCAPQ12770 USP9YP27-201ENST00000418455 438 ntBASIC4.53□□□□□ -1.68
SCAPQ12770 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.53□□□□□ -1.68
SCAPQ12770 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.53□□□□□ -1.68
SCAPQ12770 PIGFP2-201ENST00000421400 651 ntBASIC4.53□□□□□ -1.68
SCAPQ12770 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SCAPQ12770 RWDD4P2-201ENST00000426392 563 ntBASIC4.53□□□□□ -1.68
SCAPQ12770 AL358934.1-201ENST00000432346 324 ntBASIC4.53□□□□□ -1.68
SCAPQ12770 FCF1P1-201ENST00000432690 571 ntBASIC4.53□□□□□ -1.68
SCAPQ12770 AC009961.2-201ENST00000435771 251 ntBASIC4.53□□□□□ -1.68
SCAPQ12770 TPT1P14-201ENST00000448018 505 ntBASIC4.53□□□□□ -1.68
SCAPQ12770 ARPC3P5-201ENST00000448802 534 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms