Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.3□□□□□ -1.88
CDKL1Q00532 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.3□□□□□ -1.88
CDKL1Q00532 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.3□□□□□ -1.88
CDKL1Q00532 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDKL1Q00532 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CDKL1Q00532 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.3□□□□□ -1.88
CDKL1Q00532 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDKL1Q00532 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CDKL1Q00532 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.29□□□□□ -1.88
CDKL1Q00532 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CDKL1Q00532 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDKL1Q00532 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDKL1Q00532 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CDKL1Q00532 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.29□□□□□ -1.88
CDKL1Q00532 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.29□□□□□ -1.88
CDKL1Q00532 RNU6-1122P-201ENST00000384449 107 ntBASIC3.29□□□□□ -1.88
CDKL1Q00532 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.29□□□□□ -1.88
CDKL1Q00532 RPL21P112-201ENST00000434403 463 ntBASIC3.29□□□□□ -1.88
CDKL1Q00532 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.29□□□□□ -1.88
CDKL1Q00532 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.29□□□□□ -1.88
CDKL1Q00532 MTCYBP11-201ENST00000447254 1109 ntBASIC3.29□□□□□ -1.88
CDKL1Q00532 RPL18AP17-201ENST00000455326 198 ntBASIC3.29□□□□□ -1.88
CDKL1Q00532 RPL23AP62-201ENST00000463396 453 ntBASIC3.29□□□□□ -1.88
CDKL1Q00532 AC020898.1-201ENST00000474167 787 ntBASIC3.29□□□□□ -1.88
CDKL1Q00532 AC108729.1-201ENST00000487812 947 ntBASIC3.29□□□□□ -1.88
CDKL1Q00532 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.29□□□□□ -1.88
CDKL1Q00532 HMGB1P22-201ENST00000505315 124 ntBASIC3.29□□□□□ -1.88
CDKL1Q00532 AC004062.1-201ENST00000509926 645 ntBASIC3.29□□□□□ -1.88
CDKL1Q00532 RNU6-583P-201ENST00000516012 92 ntBASIC3.29□□□□□ -1.88
CDKL1Q00532 IGKV2-26-201ENST00000518305 343 ntBASIC3.29□□□□□ -1.88
CDKL1Q00532 MTND2P32-201ENST00000521584 1038 ntBASIC3.29□□□□□ -1.88
CDKL1Q00532 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.29□□□□□ -1.88
CDKL1Q00532 IGKV2D-19-201ENST00000523346 262 ntBASIC3.29□□□□□ -1.88
CDKL1Q00532 OR5B10P-201ENST00000532869 642 ntBASIC3.29□□□□□ -1.88
CDKL1Q00532 AP000619.3-201ENST00000535634 1127 ntBASIC3.29□□□□□ -1.88
CDKL1Q00532 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.29□□□□□ -1.88
CDKL1Q00532 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.29□□□□□ -1.88
CDKL1Q00532 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.29□□□□□ -1.88
CDKL1Q00532 CCDC58P3-201ENST00000590792 430 ntBASIC3.29□□□□□ -1.88
CDKL1Q00532 BNIP3P24-201ENST00000593398 557 ntBASIC3.29□□□□□ -1.88
CDKL1Q00532 AC245036.5-201ENST00000596330 847 ntBASIC3.29□□□□□ -1.88
CDKL1Q00532 AL355812.1-201ENST00000603215 216 ntBASIC3.29□□□□□ -1.88
CDKL1Q00532 AC006254.3-201ENST00000603353 884 ntBASIC3.29□□□□□ -1.88
CDKL1Q00532 BNIP3P11-201ENST00000603878 563 ntBASIC3.29□□□□□ -1.88
CDKL1Q00532 AC069304.2-201ENST00000605154 435 ntBASIC3.29□□□□□ -1.88
CDKL1Q00532 AC128687.1-201ENST00000605304 619 ntBASIC3.29□□□□□ -1.88
CDKL1Q00532 AC011816.2-201ENST00000607089 556 ntBASIC3.29□□□□□ -1.88
CDKL1Q00532 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.29□□□□□ -1.88
CDKL1Q00532 AL356321.1-201ENST00000621360 228 ntBASIC3.29□□□□□ -1.88
CDKL1Q00532 AL356863.1-201ENST00000623378 1080 ntBASIC3.29□□□□□ -1.88
CDKL1Q00532 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDKL1Q00532 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.29□□□□□ -1.88
CDKL1Q00532 MTND5P27-201ENST00000428871 1720 ntBASIC3.29□□□□□ -1.88
CDKL1Q00532 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
CDKL1Q00532 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDKL1Q00532 MTND5P24-201ENST00000438892 1767 ntBASIC3.28□□□□□ -1.88
CDKL1Q00532 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDKL1Q00532 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDKL1Q00532 RNU4-35P-201ENST00000362588 141 ntBASIC3.28□□□□□ -1.88
CDKL1Q00532 RNA5SP383-201ENST00000362934 120 ntBASIC3.28□□□□□ -1.88
CDKL1Q00532 Y_RNA.126-201ENST00000363382 111 ntBASIC3.28□□□□□ -1.88
CDKL1Q00532 RNA5SP189-201ENST00000364920 115 ntBASIC3.28□□□□□ -1.88
CDKL1Q00532 MIR218-2-201ENST00000385006 110 ntBASIC3.28□□□□□ -1.88
CDKL1Q00532 MIR513B-201ENST00000385136 84 ntBASIC3.28□□□□□ -1.88
CDKL1Q00532 PTMAP5-201ENST00000393073 333 ntBASIC3.28□□□□□ -1.88
CDKL1Q00532 HMGB3P23-201ENST00000414981 585 ntBASIC3.28□□□□□ -1.88
CDKL1Q00532 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.28□□□□□ -1.88
CDKL1Q00532 RAD23BP2-201ENST00000416003 1207 ntBASIC3.28□□□□□ -1.88
CDKL1Q00532 EI24P1-201ENST00000416584 867 ntBASIC3.28□□□□□ -1.88
CDKL1Q00532 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.28□□□□□ -1.88
CDKL1Q00532 RPL21P66-201ENST00000426566 466 ntBASIC3.28□□□□□ -1.88
CDKL1Q00532 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.28□□□□□ -1.88
CDKL1Q00532 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.28□□□□□ -1.88
CDKL1Q00532 COX7BP2-201ENST00000437976 242 ntBASIC3.28□□□□□ -1.88
CDKL1Q00532 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.28□□□□□ -1.88
CDKL1Q00532 ISCA1P2-201ENST00000438679 421 ntBASIC3.28□□□□□ -1.88
CDKL1Q00532 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.28□□□□□ -1.88
CDKL1Q00532 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.28□□□□□ -1.88
CDKL1Q00532 RPL21P134-201ENST00000453468 483 ntBASIC3.28□□□□□ -1.88
CDKL1Q00532 USP9YP34-201ENST00000453983 808 ntBASIC3.28□□□□□ -1.88
CDKL1Q00532 AL445669.2-201ENST00000454425 421 ntBASIC3.28□□□□□ -1.88
CDKL1Q00532 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.28□□□□□ -1.88
CDKL1Q00532 AC026410.2-201ENST00000460281 156 ntBASIC3.28□□□□□ -1.88
CDKL1Q00532 AC025518.1-201ENST00000479856 347 ntBASIC3.28□□□□□ -1.88
CDKL1Q00532 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CDKL1Q00532 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.28□□□□□ -1.88
CDKL1Q00532 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.28□□□□□ -1.88
CDKL1Q00532 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.28□□□□□ -1.88
CDKL1Q00532 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.28□□□□□ -1.88
CDKL1Q00532 AC109635.4-202ENST00000531666 412 ntBASIC3.28□□□□□ -1.88
CDKL1Q00532 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.28□□□□□ -1.88
CDKL1Q00532 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CDKL1Q00532 AL512347.1-201ENST00000566420 503 ntBASIC3.28□□□□□ -1.88
CDKL1Q00532 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
CDKL1Q00532 MIR4637-201ENST00000582405 84 ntBASIC3.28□□□□□ -1.88
CDKL1Q00532 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.28□□□□□ -1.88
CDKL1Q00532 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.28□□□□□ -1.88
CDKL1Q00532 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.28□□□□□ -1.88
CDKL1Q00532 AC103881.1-201ENST00000603476 538 ntBASIC3.28□□□□□ -1.88
CDKL1Q00532 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms