Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC2.08□□□□□ -2.08
CCL20P78556 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.08□□□□□ -2.08
CCL20P78556 AC008885.1-201ENST00000514930 301 ntBASIC2.08□□□□□ -2.08
CCL20P78556 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.08□□□□□ -2.08
CCL20P78556 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.08□□□□□ -2.08
CCL20P78556 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.08□□□□□ -2.08
CCL20P78556 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.08□□□□□ -2.08
CCL20P78556 AC090695.1-201ENST00000561269 1222 ntBASIC2.08□□□□□ -2.08
CCL20P78556 MIR4635-201ENST00000583759 79 ntBASIC2.08□□□□□ -2.08
CCL20P78556 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.08□□□□□ -2.08
CCL20P78556 AC119501.1-201ENST00000603646 475 ntBASIC2.08□□□□□ -2.08
CCL20P78556 AL049779.4-201ENST00000604500 156 ntBASIC2.08□□□□□ -2.08
CCL20P78556 AC021851.1-201ENST00000608537 1082 ntBASIC2.08□□□□□ -2.08
CCL20P78556 AL138880.2-201ENST00000616214 239 ntBASIC2.08□□□□□ -2.08
CCL20P78556 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.08□□□□□ -2.08
CCL20P78556 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.08□□□□□ -2.08
CCL20P78556 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC2.08□□□□□ -2.08
CCL20P78556 MTND5P31-201ENST00000419366 1374 ntBASIC2.08□□□□□ -2.08
CCL20P78556 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.08□□□□□ -2.08
CCL20P78556 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
CCL20P78556 RNU5D-1-201ENST00000363299 116 ntBASIC2.07□□□□□ -2.08
CCL20P78556 RNA5SP27-201ENST00000363839 119 ntBASIC2.07□□□□□ -2.08
CCL20P78556 RNU1-109P-201ENST00000383960 147 ntBASIC2.07□□□□□ -2.08
CCL20P78556 RNU6-921P-201ENST00000384361 107 ntBASIC2.07□□□□□ -2.08
CCL20P78556 MIR649-201ENST00000384843 97 ntBASIC2.07□□□□□ -2.08
CCL20P78556 TANK-203ENST00000402568 878 ntTSL 5 BASIC2.07□□□□□ -2.08
CCL20P78556 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CCL20P78556 RNU6ATAC-201ENST00000408749 126 ntBASIC2.07□□□□□ -2.08
CCL20P78556 AC245052.5-201ENST00000416320 649 ntBASIC2.07□□□□□ -2.08
CCL20P78556 AC099677.1-201ENST00000420575 175 ntBASIC2.07□□□□□ -2.08
CCL20P78556 TMEM167AP1-201ENST00000423409 219 ntBASIC2.07□□□□□ -2.08
CCL20P78556 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC2.07□□□□□ -2.08
CCL20P78556 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.07□□□□□ -2.08
CCL20P78556 RPS26P30-201ENST00000443431 335 ntBASIC2.07□□□□□ -2.08
CCL20P78556 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.07□□□□□ -2.08
CCL20P78556 HMGN3P1-201ENST00000453847 193 ntBASIC2.07□□□□□ -2.08
CCL20P78556 AC234775.1-201ENST00000454247 670 ntBASIC2.07□□□□□ -2.08
CCL20P78556 BX248409.1-201ENST00000455497 255 ntBASIC2.07□□□□□ -2.08
CCL20P78556 AP002812.1-201ENST00000495378 474 ntBASIC2.07□□□□□ -2.08
CCL20P78556 AC091917.2-201ENST00000505002 744 ntBASIC2.07□□□□□ -2.08
CCL20P78556 SEM1P1-201ENST00000506694 209 ntBASIC2.07□□□□□ -2.08
CCL20P78556 PRELID3BP5-201ENST00000508612 460 ntBASIC2.07□□□□□ -2.08
CCL20P78556 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.07□□□□□ -2.08
CCL20P78556 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.07□□□□□ -2.08
CCL20P78556 SCGB1D5P-201ENST00000515134 247 ntBASIC2.07□□□□□ -2.08
CCL20P78556 AC026403.1-201ENST00000518938 295 ntBASIC2.07□□□□□ -2.08
CCL20P78556 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.07□□□□□ -2.08
CCL20P78556 CKS1BP7-201ENST00000522230 235 ntBASIC2.07□□□□□ -2.08
CCL20P78556 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.07□□□□□ -2.08
CCL20P78556 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.07□□□□□ -2.08
CCL20P78556 OR8K4P-201ENST00000534608 872 ntBASIC2.07□□□□□ -2.08
CCL20P78556 AC018630.1-201ENST00000541376 925 ntBASIC2.07□□□□□ -2.08
CCL20P78556 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.07□□□□□ -2.08
CCL20P78556 AC004217.3-201ENST00000551552 878 ntBASIC2.07□□□□□ -2.08
CCL20P78556 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.07□□□□□ -2.08
CCL20P78556 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.07□□□□□ -2.08
CCL20P78556 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC2.07□□□□□ -2.08
CCL20P78556 RPL23AP78-201ENST00000599928 470 ntBASIC2.07□□□□□ -2.08
CCL20P78556 U73023.1-201ENST00000603134 700 ntBASIC2.07□□□□□ -2.08
CCL20P78556 AC040168.1-201ENST00000623594 991 ntBASIC2.07□□□□□ -2.08
CCL20P78556 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
CCL20P78556 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.07□□□□□ -2.08
CCL20P78556 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CCL20P78556 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.07□□□□□ -2.08
CCL20P78556 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CCL20P78556 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CCL20P78556 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.07□□□□□ -2.08
CCL20P78556 AC024341.1-201ENST00000526444 1552 ntBASIC2.06□□□□□ -2.08
CCL20P78556 AL049780.3-201ENST00000624612 1583 ntBASIC2.06□□□□□ -2.08
CCL20P78556 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CCL20P78556 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
CCL20P78556 AC138915.1-201ENST00000565427 1685 ntBASIC2.06□□□□□ -2.08
CCL20P78556 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
CCL20P78556 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CCL20P78556 SNORA80E-201ENST00000384744 137 ntBASIC2.06□□□□□ -2.08
CCL20P78556 SNORA48.5-201ENST00000391143 135 ntBASIC2.06□□□□□ -2.08
CCL20P78556 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.06□□□□□ -2.08
CCL20P78556 RPS15AP38-201ENST00000413110 372 ntBASIC2.06□□□□□ -2.08
CCL20P78556 BX682237.1-201ENST00000415016 335 ntBASIC2.06□□□□□ -2.08
CCL20P78556 AL137014.1-201ENST00000420490 1226 ntBASIC2.06□□□□□ -2.08
CCL20P78556 AL590762.3-201ENST00000436372 640 ntBASIC2.06□□□□□ -2.08
CCL20P78556 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.06□□□□□ -2.08
CCL20P78556 AL359385.1-201ENST00000456509 365 ntBASIC2.06□□□□□ -2.08
CCL20P78556 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.06□□□□□ -2.08
CCL20P78556 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CCL20P78556 AC009812.2-201ENST00000517657 457 ntBASIC2.06□□□□□ -2.08
CCL20P78556 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.06□□□□□ -2.08
CCL20P78556 AP000790.1-201ENST00000528891 737 ntBASIC2.06□□□□□ -2.08
CCL20P78556 AP000867.2-201ENST00000532468 320 ntBASIC2.06□□□□□ -2.08
CCL20P78556 OR5BN1P-201ENST00000532955 829 ntBASIC2.06□□□□□ -2.08
CCL20P78556 TRAV11-201ENST00000539512 339 ntBASIC2.06□□□□□ -2.08
CCL20P78556 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC2.06□□□□□ -2.08
CCL20P78556 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.06□□□□□ -2.08
CCL20P78556 MED28P6-201ENST00000558776 231 ntBASIC2.06□□□□□ -2.08
CCL20P78556 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.06□□□□□ -2.08
CCL20P78556 AC074051.3-201ENST00000570238 358 ntBASIC2.06□□□□□ -2.08
CCL20P78556 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC2.06□□□□□ -2.08
CCL20P78556 MIR4446-201ENST00000578505 67 ntBASIC2.06□□□□□ -2.08
CCL20P78556 MIR5092-201ENST00000583139 88 ntBASIC2.06□□□□□ -2.08
CCL20P78556 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 162.3 ms