Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AL669831.4-202ENST00000590817 238 ntBASIC4.02□□□□□ -1.77
RAE1P78406 AL606834.2-201ENST00000602954 668 ntBASIC4.02□□□□□ -1.77
RAE1P78406 AC011816.2-201ENST00000607089 556 ntBASIC4.02□□□□□ -1.77
RAE1P78406 AL355472.4-201ENST00000610233 626 ntBASIC4.02□□□□□ -1.77
RAE1P78406 AC012150.2-201ENST00000621300 544 ntBASIC4.02□□□□□ -1.77
RAE1P78406 AL359880.1-201ENST00000621879 266 ntBASIC4.02□□□□□ -1.77
RAE1P78406 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.02□□□□□ -1.77
RAE1P78406 AP006248.2-201ENST00000623309 592 ntBASIC4.02□□□□□ -1.77
RAE1P78406 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.02□□□□□ -1.77
RAE1P78406 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.02□□□□□ -1.77
RAE1P78406 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
RAE1P78406 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.02□□□□□ -1.77
RAE1P78406 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RAE1P78406 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
RAE1P78406 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
RAE1P78406 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.02□□□□□ -1.77
RAE1P78406 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.01□□□□□ -1.77
RAE1P78406 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RAE1P78406 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
RAE1P78406 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
RAE1P78406 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
RAE1P78406 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
RAE1P78406 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.01□□□□□ -1.77
RAE1P78406 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
RAE1P78406 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
RAE1P78406 RNU6-989P-201ENST00000362756 107 ntBASIC4.01□□□□□ -1.77
RAE1P78406 RNU1-132P-201ENST00000364300 164 ntBASIC4.01□□□□□ -1.77
RAE1P78406 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
RAE1P78406 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
RAE1P78406 RNU6-1103P-201ENST00000384150 107 ntBASIC4.01□□□□□ -1.77
RAE1P78406 Y_RNA.554-201ENST00000384672 102 ntBASIC4.01□□□□□ -1.77
RAE1P78406 CIR1P3-201ENST00000405137 479 ntBASIC4.01□□□□□ -1.77
RAE1P78406 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.01□□□□□ -1.77
RAE1P78406 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.01□□□□□ -1.77
RAE1P78406 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.01□□□□□ -1.77
RAE1P78406 RPS27AP12-201ENST00000429552 465 ntBASIC4.01□□□□□ -1.77
RAE1P78406 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.01□□□□□ -1.77
RAE1P78406 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.01□□□□□ -1.77
RAE1P78406 UBE2V1P13-201ENST00000436983 439 ntBASIC4.01□□□□□ -1.77
RAE1P78406 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.01□□□□□ -1.77
RAE1P78406 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.01□□□□□ -1.77
RAE1P78406 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.01□□□□□ -1.77
RAE1P78406 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.01□□□□□ -1.77
RAE1P78406 C1DP4-201ENST00000455429 424 ntBASIC4.01□□□□□ -1.77
RAE1P78406 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.01□□□□□ -1.77
RAE1P78406 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.01□□□□□ -1.77
RAE1P78406 RPS29P22-201ENST00000472363 168 ntBASIC4.01□□□□□ -1.77
RAE1P78406 RPS29P19-201ENST00000479709 171 ntBASIC4.01□□□□□ -1.77
RAE1P78406 AC006517.1-201ENST00000480485 328 ntBASIC4.01□□□□□ -1.77
RAE1P78406 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.01□□□□□ -1.77
RAE1P78406 AL139099.1-201ENST00000497398 403 ntBASIC4.01□□□□□ -1.77
RAE1P78406 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.01□□□□□ -1.77
RAE1P78406 AL592156.1-201ENST00000508758 304 ntBASIC4.01□□□□□ -1.77
RAE1P78406 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.01□□□□□ -1.77
RAE1P78406 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.01□□□□□ -1.77
RAE1P78406 AP000907.2-201ENST00000530827 353 ntBASIC4.01□□□□□ -1.77
RAE1P78406 AL133241.1-201ENST00000556832 487 ntBASIC4.01□□□□□ -1.77
RAE1P78406 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.01□□□□□ -1.77
RAE1P78406 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.01□□□□□ -1.77
RAE1P78406 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.01□□□□□ -1.77
RAE1P78406 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.01□□□□□ -1.77
RAE1P78406 RPL26P30-202ENST00000602923 645 ntBASIC4.01□□□□□ -1.77
RAE1P78406 AL109618.2-201ENST00000605527 211 ntBASIC4.01□□□□□ -1.77
RAE1P78406 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RAE1P78406 AC090970.3-201ENST00000612566 866 ntBASIC4.01□□□□□ -1.77
RAE1P78406 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.01□□□□□ -1.77
RAE1P78406 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.01□□□□□ -1.77
RAE1P78406 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.01□□□□□ -1.77
RAE1P78406 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.01□□□□□ -1.77
RAE1P78406 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
RAE1P78406 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RAE1P78406 AC074029.4-201ENST00000624796 1859 ntBASIC4.01□□□□□ -1.77
RAE1P78406 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4□□□□□ -1.77
RAE1P78406 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
RAE1P78406 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4□□□□□ -1.77
RAE1P78406 A2MP1-204ENST00000566278 4130 ntBASIC4□□□□□ -1.77
RAE1P78406 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4□□□□□ -1.77
RAE1P78406 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RAE1P78406 AC024560.2-201ENST00000507981 1497 ntBASIC4□□□□□ -1.77
RAE1P78406 AC027287.1-201ENST00000553115 1453 ntBASIC4□□□□□ -1.77
RAE1P78406 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
RAE1P78406 MAPK10-253ENST00000641010 4072 ntBASIC4□□□□□ -1.77
RAE1P78406 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RAE1P78406 AC006971.1-201ENST00000407916 4486 ntBASIC4□□□□□ -1.77
RAE1P78406 RNU6-1283P-201ENST00000365314 105 ntBASIC4□□□□□ -1.77
RAE1P78406 RHOT1P2-201ENST00000366423 333 ntBASIC4□□□□□ -1.77
RAE1P78406 Y_RNA.548-201ENST00000384656 105 ntBASIC4□□□□□ -1.77
RAE1P78406 MIR153-1-201ENST00000384914 90 ntBASIC4□□□□□ -1.77
RAE1P78406 MIR93-201ENST00000385024 80 ntBASIC4□□□□□ -1.77
RAE1P78406 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4□□□□□ -1.77
RAE1P78406 U3.22-201ENST00000391120 215 ntBASIC4□□□□□ -1.77
RAE1P78406 AL049693.1-201ENST00000402760 611 ntBASIC4□□□□□ -1.77
RAE1P78406 CCNG1P1-201ENST00000406783 885 ntBASIC4□□□□□ -1.77
RAE1P78406 MIR1179-201ENST00000408703 91 ntBASIC4□□□□□ -1.77
RAE1P78406 RNU4-55P-201ENST00000410731 137 ntBASIC4□□□□□ -1.77
RAE1P78406 AL160275.2-201ENST00000412010 394 ntBASIC4□□□□□ -1.77
RAE1P78406 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4□□□□□ -1.77
RAE1P78406 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4□□□□□ -1.77
RAE1P78406 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4□□□□□ -1.77
RAE1P78406 AC006548.1-201ENST00000427470 102 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 302 ms