Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 BEND7P1-201ENST00000422058 457 ntBASIC4.83□□□□□ -1.64
GABREP78334 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.83□□□□□ -1.64
GABREP78334 OR2AS1P-201ENST00000427827 319 ntBASIC4.83□□□□□ -1.64
GABREP78334 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.83□□□□□ -1.64
GABREP78334 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.83□□□□□ -1.64
GABREP78334 MTND4LP16-201ENST00000440828 295 ntBASIC4.83□□□□□ -1.64
GABREP78334 AC016696.1-201ENST00000446949 318 ntBASIC4.83□□□□□ -1.64
GABREP78334 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC4.83□□□□□ -1.64
GABREP78334 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.83□□□□□ -1.64
GABREP78334 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.83□□□□□ -1.64
GABREP78334 snoU13.1-201ENST00000459157 104 ntBASIC4.83□□□□□ -1.64
GABREP78334 AL163973.1-201ENST00000484753 577 ntBASIC4.83□□□□□ -1.64
GABREP78334 RPL39P36-201ENST00000490784 156 ntBASIC4.83□□□□□ -1.64
GABREP78334 RPS15AP36-201ENST00000492022 382 ntBASIC4.83□□□□□ -1.64
GABREP78334 AC026979.1-201ENST00000492525 396 ntBASIC4.83□□□□□ -1.64
GABREP78334 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.83□□□□□ -1.64
GABREP78334 AC139783.2-201ENST00000504847 1145 ntBASIC4.83□□□□□ -1.64
GABREP78334 AC026427.2-201ENST00000506228 536 ntBASIC4.83□□□□□ -1.64
GABREP78334 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.83□□□□□ -1.64
GABREP78334 SNORD27.1-201ENST00000516319 72 ntBASIC4.83□□□□□ -1.64
GABREP78334 SNORD60.2-201ENST00000516883 86 ntBASIC4.83□□□□□ -1.64
GABREP78334 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.83□□□□□ -1.64
GABREP78334 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.83□□□□□ -1.64
GABREP78334 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.83□□□□□ -1.64
GABREP78334 ARL2BPP2-201ENST00000550907 489 ntBASIC4.83□□□□□ -1.64
GABREP78334 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.83□□□□□ -1.64
GABREP78334 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.83□□□□□ -1.64
GABREP78334 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.83□□□□□ -1.64
GABREP78334 AC011712.1-201ENST00000588959 234 ntBASIC4.83□□□□□ -1.64
GABREP78334 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.83□□□□□ -1.64
GABREP78334 AC012669.1-201ENST00000603209 283 ntBASIC4.83□□□□□ -1.64
GABREP78334 AC010680.4-201ENST00000605334 543 ntBASIC4.83□□□□□ -1.64
GABREP78334 AC010632.3-201ENST00000611377 369 ntBASIC4.83□□□□□ -1.64
GABREP78334 AC093838.1-201ENST00000613014 469 ntBASIC4.83□□□□□ -1.64
GABREP78334 AC233309.1-201ENST00000619522 751 ntBASIC4.83□□□□□ -1.64
GABREP78334 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
GABREP78334 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
GABREP78334 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
GABREP78334 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.83□□□□□ -1.64
GABREP78334 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
GABREP78334 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
GABREP78334 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
GABREP78334 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
GABREP78334 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.82□□□□□ -1.64
GABREP78334 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
GABREP78334 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
GABREP78334 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
GABREP78334 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
GABREP78334 RPL7P26-201ENST00000333817 754 ntBASIC4.82□□□□□ -1.64
GABREP78334 Y_RNA.61-201ENST00000362835 102 ntBASIC4.82□□□□□ -1.64
GABREP78334 Y_RNA.72-201ENST00000362894 103 ntBASIC4.82□□□□□ -1.64
GABREP78334 Y_RNA.157-201ENST00000363638 102 ntBASIC4.82□□□□□ -1.64
GABREP78334 RN7SKP153-201ENST00000365026 316 ntBASIC4.82□□□□□ -1.64
GABREP78334 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GABREP78334 SNORD37.1-201ENST00000390968 65 ntBASIC4.82□□□□□ -1.64
GABREP78334 RNU6-837P-201ENST00000391056 108 ntBASIC4.82□□□□□ -1.64
GABREP78334 RNU6-754P-201ENST00000391166 107 ntBASIC4.82□□□□□ -1.64
GABREP78334 MIR298-201ENST00000401212 88 ntBASIC4.82□□□□□ -1.64
GABREP78334 AL109755.1-201ENST00000401791 649 ntBASIC4.82□□□□□ -1.64
GABREP78334 RNU2-36P-201ENST00000410361 191 ntBASIC4.82□□□□□ -1.64
GABREP78334 RNU2-39P-201ENST00000410604 198 ntBASIC4.82□□□□□ -1.64
GABREP78334 RSU1P3-201ENST00000412878 835 ntBASIC4.82□□□□□ -1.64
GABREP78334 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.82□□□□□ -1.64
GABREP78334 UBE2FP1-201ENST00000416536 447 ntBASIC4.82□□□□□ -1.64
GABREP78334 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.82□□□□□ -1.64
GABREP78334 MTATP6P16-201ENST00000434543 526 ntBASIC4.82□□□□□ -1.64
GABREP78334 AC093019.1-201ENST00000443135 252 ntBASIC4.82□□□□□ -1.64
GABREP78334 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.82□□□□□ -1.64
GABREP78334 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.82□□□□□ -1.64
GABREP78334 ELOCP23-201ENST00000452014 332 ntBASIC4.82□□□□□ -1.64
GABREP78334 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC4.82□□□□□ -1.64
GABREP78334 snoU13.3-201ENST00000459441 104 ntBASIC4.82□□□□□ -1.64
GABREP78334 AC126389.1-201ENST00000477436 290 ntBASIC4.82□□□□□ -1.64
GABREP78334 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.82□□□□□ -1.64
GABREP78334 RPS24P16-201ENST00000497294 392 ntBASIC4.82□□□□□ -1.64
GABREP78334 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.82□□□□□ -1.64
GABREP78334 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.82□□□□□ -1.64
GABREP78334 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.82□□□□□ -1.64
GABREP78334 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.82□□□□□ -1.64
GABREP78334 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.82□□□□□ -1.64
GABREP78334 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.82□□□□□ -1.64
GABREP78334 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.82□□□□□ -1.64
GABREP78334 AP001029.3-201ENST00000588063 596 ntBASIC4.82□□□□□ -1.64
GABREP78334 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.82□□□□□ -1.64
GABREP78334 AC010525.2-201ENST00000590920 195 ntBASIC4.82□□□□□ -1.64
GABREP78334 C8orf59P2-201ENST00000603441 271 ntBASIC4.82□□□□□ -1.64
GABREP78334 AC010591.1-201ENST00000603941 649 ntBASIC4.82□□□□□ -1.64
GABREP78334 AP001521.2-201ENST00000608772 546 ntBASIC4.82□□□□□ -1.64
GABREP78334 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
GABREP78334 AC010338.1-201ENST00000621823 717 ntBASIC4.82□□□□□ -1.64
GABREP78334 AC100810.6-201ENST00000638068 285 ntBASIC4.82□□□□□ -1.64
GABREP78334 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
GABREP78334 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
GABREP78334 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
GABREP78334 PNPT1P2-201ENST00000456768 2050 ntBASIC4.82□□□□□ -1.64
GABREP78334 MUC2-202ENST00000613187 4845 ntBASIC4.82□□□□□ -1.64
GABREP78334 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GABREP78334 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GABREP78334 RIOK3P1-201ENST00000418778 1528 ntBASIC4.82□□□□□ -1.64
GABREP78334 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms