Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC133555.2-201ENST00000550213 292 ntBASIC4.28□□□□□ -1.72
CLRN1P58418 AC068831.4-201ENST00000556118 109 ntBASIC4.28□□□□□ -1.72
CLRN1P58418 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.28□□□□□ -1.72
CLRN1P58418 AC016727.1-205ENST00000605437 569 ntBASIC4.28□□□□□ -1.72
CLRN1P58418 MIR8069-1-201ENST00000616627 86 ntBASIC4.28□□□□□ -1.72
CLRN1P58418 MIR8069-2-201ENST00000621412 86 ntBASIC4.28□□□□□ -1.72
CLRN1P58418 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLRN1P58418 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CLRN1P58418 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CLRN1P58418 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLRN1P58418 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLRN1P58418 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLRN1P58418 TLK1P1-201ENST00000456760 2440 ntBASIC4.27□□□□□ -1.73
CLRN1P58418 AL445487.1-201ENST00000415694 1580 ntBASIC4.27□□□□□ -1.73
CLRN1P58418 AL450326.2-201ENST00000421913 1962 ntBASIC4.27□□□□□ -1.73
CLRN1P58418 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLRN1P58418 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.27□□□□□ -1.73
CLRN1P58418 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.27□□□□□ -1.73
CLRN1P58418 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.27□□□□□ -1.73
CLRN1P58418 PABPC1P7-201ENST00000413177 1513 ntBASIC4.27□□□□□ -1.73
CLRN1P58418 INTS6P1-201ENST00000504674 2530 ntBASIC4.27□□□□□ -1.73
CLRN1P58418 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLRN1P58418 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CLRN1P58418 RNU6-1078P-201ENST00000364522 103 ntBASIC4.27□□□□□ -1.73
CLRN1P58418 RNU4-48P-201ENST00000365559 182 ntBASIC4.27□□□□□ -1.73
CLRN1P58418 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLRN1P58418 MIR558-201ENST00000384920 94 ntBASIC4.27□□□□□ -1.73
CLRN1P58418 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CLRN1P58418 SPTLC1P2-201ENST00000407089 121 ntBASIC4.27□□□□□ -1.73
CLRN1P58418 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.27□□□□□ -1.73
CLRN1P58418 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.27□□□□□ -1.73
CLRN1P58418 PDCL2P1-201ENST00000419302 352 ntBASIC4.27□□□□□ -1.73
CLRN1P58418 SDCBPP3-201ENST00000419629 891 ntBASIC4.27□□□□□ -1.73
CLRN1P58418 MTCYBP8-201ENST00000422855 651 ntBASIC4.27□□□□□ -1.73
CLRN1P58418 CHIAP3-201ENST00000423668 1133 ntBASIC4.27□□□□□ -1.73
CLRN1P58418 RWDD4P2-201ENST00000426392 563 ntBASIC4.27□□□□□ -1.73
CLRN1P58418 AC008850.1-201ENST00000427546 362 ntBASIC4.27□□□□□ -1.73
CLRN1P58418 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.27□□□□□ -1.73
CLRN1P58418 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.27□□□□□ -1.73
CLRN1P58418 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.27□□□□□ -1.73
CLRN1P58418 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.27□□□□□ -1.73
CLRN1P58418 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.27□□□□□ -1.73
CLRN1P58418 RPS17P13-201ENST00000448974 407 ntBASIC4.27□□□□□ -1.73
CLRN1P58418 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.27□□□□□ -1.73
CLRN1P58418 AP000942.1-201ENST00000463969 747 ntBASIC4.27□□□□□ -1.73
CLRN1P58418 ST13P14-201ENST00000474095 734 ntBASIC4.27□□□□□ -1.73
CLRN1P58418 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.27□□□□□ -1.73
CLRN1P58418 AL163973.1-201ENST00000484753 577 ntBASIC4.27□□□□□ -1.73
CLRN1P58418 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.27□□□□□ -1.73
CLRN1P58418 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLRN1P58418 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLRN1P58418 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.27□□□□□ -1.73
CLRN1P58418 SNORD27.1-201ENST00000516319 72 ntBASIC4.27□□□□□ -1.73
CLRN1P58418 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.27□□□□□ -1.73
CLRN1P58418 PSMA2P1-201ENST00000526365 646 ntBASIC4.27□□□□□ -1.73
CLRN1P58418 AC243972.3-201ENST00000539655 198 ntBASIC4.27□□□□□ -1.73
CLRN1P58418 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.27□□□□□ -1.73
CLRN1P58418 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.27□□□□□ -1.73
CLRN1P58418 LSM3P2-201ENST00000551246 273 ntBASIC4.27□□□□□ -1.73
CLRN1P58418 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.27□□□□□ -1.73
CLRN1P58418 EDDM3DP-201ENST00000554692 434 ntBASIC4.27□□□□□ -1.73
CLRN1P58418 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CLRN1P58418 AL133153.1-201ENST00000557756 303 ntBASIC4.27□□□□□ -1.73
CLRN1P58418 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.27□□□□□ -1.73
CLRN1P58418 AP001029.3-201ENST00000588063 596 ntBASIC4.27□□□□□ -1.73
CLRN1P58418 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.27□□□□□ -1.73
CLRN1P58418 AL355812.1-201ENST00000603215 216 ntBASIC4.27□□□□□ -1.73
CLRN1P58418 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.27□□□□□ -1.73
CLRN1P58418 AL031666.3-201ENST00000609320 1006 ntBASIC4.27□□□□□ -1.73
CLRN1P58418 AC244100.1-202ENST00000621554 382 ntBASIC4.27□□□□□ -1.73
CLRN1P58418 AP003400.5-201ENST00000624827 617 ntBASIC4.27□□□□□ -1.73
CLRN1P58418 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.27□□□□□ -1.73
CLRN1P58418 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CLRN1P58418 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CLRN1P58418 AC006026.1-201ENST00000444025 1803 ntBASIC4.27□□□□□ -1.73
CLRN1P58418 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLRN1P58418 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
CLRN1P58418 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.27□□□□□ -1.73
CLRN1P58418 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
CLRN1P58418 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLRN1P58418 SAMMSON-226ENST00000642089 1582 ntBASIC4.27□□□□□ -1.73
CLRN1P58418 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLRN1P58418 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.26□□□□□ -1.73
CLRN1P58418 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLRN1P58418 RPS4XP5-202ENST00000449995 1334 ntBASIC4.26□□□□□ -1.73
CLRN1P58418 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLRN1P58418 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLRN1P58418 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLRN1P58418 MTND5P17-201ENST00000418405 1603 ntBASIC4.26□□□□□ -1.73
CLRN1P58418 SNORD81.2-201ENST00000365153 76 ntBASIC4.26□□□□□ -1.73
CLRN1P58418 RNU11-4P-201ENST00000391149 133 ntBASIC4.26□□□□□ -1.73
CLRN1P58418 RNU6-332P-201ENST00000391193 108 ntBASIC4.26□□□□□ -1.73
CLRN1P58418 SNORA68.2-201ENST00000391263 128 ntBASIC4.26□□□□□ -1.73
CLRN1P58418 AP000580.1-201ENST00000404439 358 ntBASIC4.26□□□□□ -1.73
CLRN1P58418 DPPA2P3-201ENST00000411853 655 ntBASIC4.26□□□□□ -1.73
CLRN1P58418 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.26□□□□□ -1.73
CLRN1P58418 OR1AA1P-201ENST00000419597 916 ntBASIC4.26□□□□□ -1.73
CLRN1P58418 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.26□□□□□ -1.73
CLRN1P58418 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.26□□□□□ -1.73
CLRN1P58418 BRWD1P3-201ENST00000428816 390 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms