Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.47□□□□□ -2.01
CLDN12P56749 RPP40P1-201ENST00000426762 456 ntBASIC2.47□□□□□ -2.01
CLDN12P56749 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.47□□□□□ -2.01
CLDN12P56749 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.47□□□□□ -2.01
CLDN12P56749 MRPL50P4-201ENST00000446432 475 ntBASIC2.47□□□□□ -2.01
CLDN12P56749 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.47□□□□□ -2.01
CLDN12P56749 TRBV26-201ENST00000456572 344 ntBASIC2.47□□□□□ -2.01
CLDN12P56749 RPS20P24-201ENST00000457473 361 ntBASIC2.47□□□□□ -2.01
CLDN12P56749 AL031183.1-201ENST00000457667 207 ntBASIC2.47□□□□□ -2.01
CLDN12P56749 NAP1L1P3-201ENST00000462291 880 ntBASIC2.47□□□□□ -2.01
CLDN12P56749 AL672167.3-201ENST00000465951 960 ntBASIC2.47□□□□□ -2.01
CLDN12P56749 AC003982.1-202ENST00000469928 248 ntBASIC2.47□□□□□ -2.01
CLDN12P56749 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CLDN12P56749 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.47□□□□□ -2.01
CLDN12P56749 RNU6-551P-201ENST00000516661 103 ntBASIC2.47□□□□□ -2.01
CLDN12P56749 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.47□□□□□ -2.01
CLDN12P56749 AP000790.1-201ENST00000528891 737 ntBASIC2.47□□□□□ -2.01
CLDN12P56749 AC126177.3-201ENST00000551839 688 ntBASIC2.47□□□□□ -2.01
CLDN12P56749 AC125611.2-201ENST00000551907 647 ntBASIC2.47□□□□□ -2.01
CLDN12P56749 ADAM3B-201ENST00000569937 840 ntBASIC2.47□□□□□ -2.01
CLDN12P56749 FAM60BP-201ENST00000578364 658 ntBASIC2.47□□□□□ -2.01
CLDN12P56749 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.47□□□□□ -2.01
CLDN12P56749 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.47□□□□□ -2.01
CLDN12P56749 AC055876.5-201ENST00000605667 259 ntBASIC2.47□□□□□ -2.01
CLDN12P56749 AP004247.3-201ENST00000608682 624 ntBASIC2.47□□□□□ -2.01
CLDN12P56749 AC016911.1-201ENST00000613297 452 ntBASIC2.47□□□□□ -2.01
CLDN12P56749 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.47□□□□□ -2.01
CLDN12P56749 AC006378.2-201ENST00000623178 2476 ntBASIC2.47□□□□□ -2.01
CLDN12P56749 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
CLDN12P56749 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.47□□□□□ -2.01
CLDN12P56749 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
CLDN12P56749 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
CLDN12P56749 AL035425.3-201ENST00000564206 4996 ntBASIC2.46□□□□□ -2.02
CLDN12P56749 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CLDN12P56749 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CLDN12P56749 SNORA62.3-201ENST00000365110 153 ntBASIC2.46□□□□□ -2.02
CLDN12P56749 MIR525-201ENST00000384978 85 ntBASIC2.46□□□□□ -2.02
CLDN12P56749 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.46□□□□□ -2.02
CLDN12P56749 RNU4-47P-201ENST00000410876 114 ntBASIC2.46□□□□□ -2.02
CLDN12P56749 AL159987.2-201ENST00000432754 307 ntBASIC2.46□□□□□ -2.02
CLDN12P56749 OR6K5P-201ENST00000447050 945 ntBASIC2.46□□□□□ -2.02
CLDN12P56749 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.46□□□□□ -2.02
CLDN12P56749 BTF3P5-201ENST00000457252 467 ntBASIC2.46□□□□□ -2.02
CLDN12P56749 SAP18P1-201ENST00000512058 390 ntBASIC2.46□□□□□ -2.02
CLDN12P56749 OR7K1P-201ENST00000546439 926 ntBASIC2.46□□□□□ -2.02
CLDN12P56749 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.46□□□□□ -2.02
CLDN12P56749 AC233266.2-201ENST00000567067 528 ntBASIC2.46□□□□□ -2.02
CLDN12P56749 AC095057.3-201ENST00000567102 1157 ntBASIC2.46□□□□□ -2.02
CLDN12P56749 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.46□□□□□ -2.02
CLDN12P56749 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.46□□□□□ -2.02
CLDN12P56749 RPL23AP88-201ENST00000605759 454 ntBASIC2.46□□□□□ -2.02
CLDN12P56749 AC073569.3-201ENST00000619055 682 ntBASIC2.46□□□□□ -2.02
CLDN12P56749 AC026422.1-201ENST00000623961 452 ntBASIC2.46□□□□□ -2.02
CLDN12P56749 AC092593.1-201ENST00000515413 1815 ntBASIC2.46□□□□□ -2.02
CLDN12P56749 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CLDN12P56749 VTRNA1-1-201ENST00000363120 99 ntBASIC2.45□□□□□ -2.02
CLDN12P56749 RNU6-173P-201ENST00000364215 104 ntBASIC2.45□□□□□ -2.02
CLDN12P56749 SNORD56.5-201ENST00000364281 72 ntBASIC2.45□□□□□ -2.02
CLDN12P56749 SNORA9.2-201ENST00000365361 133 ntBASIC2.45□□□□□ -2.02
CLDN12P56749 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CLDN12P56749 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CLDN12P56749 AL136372.1-201ENST00000403060 228 ntBASIC2.45□□□□□ -2.02
CLDN12P56749 AL139095.1-201ENST00000404326 391 ntBASIC2.45□□□□□ -2.02
CLDN12P56749 RNU6-77P-201ENST00000410554 91 ntBASIC2.45□□□□□ -2.02
CLDN12P56749 RPL7P30-201ENST00000420888 709 ntBASIC2.45□□□□□ -2.02
CLDN12P56749 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.45□□□□□ -2.02
CLDN12P56749 RPL27AP8-201ENST00000424277 446 ntBASIC2.45□□□□□ -2.02
CLDN12P56749 MTCO1P39-201ENST00000426148 480 ntBASIC2.45□□□□□ -2.02
CLDN12P56749 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.45□□□□□ -2.02
CLDN12P56749 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.45□□□□□ -2.02
CLDN12P56749 RPL36AP6-201ENST00000435770 321 ntBASIC2.45□□□□□ -2.02
CLDN12P56749 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.45□□□□□ -2.02
CLDN12P56749 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.45□□□□□ -2.02
CLDN12P56749 MTND5P8-201ENST00000449817 1083 ntBASIC2.45□□□□□ -2.02
CLDN12P56749 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.45□□□□□ -2.02
CLDN12P56749 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CLDN12P56749 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.45□□□□□ -2.02
CLDN12P56749 SNORA9.3-201ENST00000516383 129 ntBASIC2.45□□□□□ -2.02
CLDN12P56749 SNORA26.10-201ENST00000516427 141 ntBASIC2.45□□□□□ -2.02
CLDN12P56749 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.45□□□□□ -2.02
CLDN12P56749 EEF1B2P4-201ENST00000551398 348 ntBASIC2.45□□□□□ -2.02
CLDN12P56749 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.45□□□□□ -2.02
CLDN12P56749 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.45□□□□□ -2.02
CLDN12P56749 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.45□□□□□ -2.02
CLDN12P56749 MIR5680-201ENST00000577577 84 ntBASIC2.45□□□□□ -2.02
CLDN12P56749 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.45□□□□□ -2.02
CLDN12P56749 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.45□□□□□ -2.02
CLDN12P56749 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.45□□□□□ -2.02
CLDN12P56749 AC091057.2-201ENST00000602594 792 ntBASIC2.45□□□□□ -2.02
CLDN12P56749 AP000787.2-201ENST00000604432 568 ntBASIC2.45□□□□□ -2.02
CLDN12P56749 BNIP3P4-201ENST00000604946 565 ntBASIC2.45□□□□□ -2.02
CLDN12P56749 AC106900.2-201ENST00000604994 317 ntBASIC2.45□□□□□ -2.02
CLDN12P56749 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CLDN12P56749 MTCO1P12-201ENST00000414273 1543 ntBASIC2.45□□□□□ -2.02
CLDN12P56749 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.45□□□□□ -2.02
CLDN12P56749 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CLDN12P56749 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.45□□□□□ -2.02
CLDN12P56749 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.45□□□□□ -2.02
CLDN12P56749 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
CLDN12P56749 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms