Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
GFRA1P56159 RNU6-946P-201ENST00000383878 107 ntBASIC4.7□□□□□ -1.66
GFRA1P56159 MIR589-201ENST00000385238 99 ntBASIC4.7□□□□□ -1.66
GFRA1P56159 AL645927.1-201ENST00000396783 406 ntBASIC4.7□□□□□ -1.66
GFRA1P56159 RNU2-43P-201ENST00000410306 190 ntBASIC4.7□□□□□ -1.66
GFRA1P56159 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.7□□□□□ -1.66
GFRA1P56159 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
GFRA1P56159 RPL30P2-201ENST00000414021 291 ntBASIC4.7□□□□□ -1.66
GFRA1P56159 GJA6P-201ENST00000415117 1042 ntBASIC4.7□□□□□ -1.66
GFRA1P56159 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.7□□□□□ -1.66
GFRA1P56159 AC024082.2-201ENST00000434771 238 ntBASIC4.7□□□□□ -1.66
GFRA1P56159 CYCSP43-201ENST00000438233 310 ntBASIC4.7□□□□□ -1.66
GFRA1P56159 RPS29P10-201ENST00000439197 166 ntBASIC4.7□□□□□ -1.66
GFRA1P56159 AC090804.1-201ENST00000448870 490 ntBASIC4.7□□□□□ -1.66
GFRA1P56159 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.7□□□□□ -1.66
GFRA1P56159 RPL35AP28-201ENST00000459730 331 ntBASIC4.7□□□□□ -1.66
GFRA1P56159 AC083904.1-201ENST00000487828 231 ntBASIC4.7□□□□□ -1.66
GFRA1P56159 AL049874.2-201ENST00000492636 288 ntBASIC4.7□□□□□ -1.66
GFRA1P56159 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
GFRA1P56159 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.7□□□□□ -1.66
GFRA1P56159 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.7□□□□□ -1.66
GFRA1P56159 AP000763.2-201ENST00000540641 163 ntBASIC4.7□□□□□ -1.66
GFRA1P56159 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.7□□□□□ -1.66
GFRA1P56159 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.7□□□□□ -1.66
GFRA1P56159 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.7□□□□□ -1.66
GFRA1P56159 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.7□□□□□ -1.66
GFRA1P56159 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
GFRA1P56159 MIR5583-1-201ENST00000580941 59 ntBASIC4.7□□□□□ -1.66
GFRA1P56159 RN7SL708P-201ENST00000580952 299 ntBASIC4.7□□□□□ -1.66
GFRA1P56159 AC011626.1-201ENST00000604710 562 ntBASIC4.7□□□□□ -1.66
GFRA1P56159 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
GFRA1P56159 uc_338.15-201ENST00000615470 191 ntBASIC4.7□□□□□ -1.66
GFRA1P56159 AL450472.3-201ENST00000615578 367 ntBASIC4.7□□□□□ -1.66
GFRA1P56159 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
GFRA1P56159 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.7□□□□□ -1.66
GFRA1P56159 AL133216.2-202ENST00000634512 349 ntBASIC4.7□□□□□ -1.66
GFRA1P56159 AC090229.1-201ENST00000590983 1609 ntBASIC4.7□□□□□ -1.66
GFRA1P56159 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
GFRA1P56159 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
GFRA1P56159 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
GFRA1P56159 AC023421.1-201ENST00000590535 1785 ntBASIC4.7□□□□□ -1.66
GFRA1P56159 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
GFRA1P56159 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
GFRA1P56159 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
GFRA1P56159 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
GFRA1P56159 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
GFRA1P56159 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
GFRA1P56159 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
GFRA1P56159 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.7□□□□□ -1.66
GFRA1P56159 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
GFRA1P56159 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
GFRA1P56159 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
GFRA1P56159 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
GFRA1P56159 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.69□□□□□ -1.66
GFRA1P56159 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
GFRA1P56159 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.69□□□□□ -1.66
GFRA1P56159 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.69□□□□□ -1.66
GFRA1P56159 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
GFRA1P56159 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
GFRA1P56159 AC093591.2-201ENST00000565254 3843 ntBASIC4.69□□□□□ -1.66
GFRA1P56159 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
GFRA1P56159 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
GFRA1P56159 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
GFRA1P56159 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC4.69□□□□□ -1.66
GFRA1P56159 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
GFRA1P56159 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
GFRA1P56159 RNA5SP305-201ENST00000362665 119 ntBASIC4.69□□□□□ -1.66
GFRA1P56159 RNU6-82P-201ENST00000363970 107 ntBASIC4.69□□□□□ -1.66
GFRA1P56159 Y_RNA.315-201ENST00000365117 102 ntBASIC4.69□□□□□ -1.66
GFRA1P56159 SNORA23-201ENST00000365128 182 ntBASIC4.69□□□□□ -1.66
GFRA1P56159 SMIM11P1-201ENST00000369586 178 ntBASIC4.69□□□□□ -1.66
GFRA1P56159 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.69□□□□□ -1.66
GFRA1P56159 Y_RNA.394-201ENST00000383942 103 ntBASIC4.69□□□□□ -1.66
GFRA1P56159 RNU6-550P-201ENST00000391057 101 ntBASIC4.69□□□□□ -1.66
GFRA1P56159 SNORA48.4-201ENST00000391089 134 ntBASIC4.69□□□□□ -1.66
GFRA1P56159 BX323014.1-201ENST00000412876 237 ntBASIC4.69□□□□□ -1.66
GFRA1P56159 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC4.69□□□□□ -1.66
GFRA1P56159 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.69□□□□□ -1.66
GFRA1P56159 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.69□□□□□ -1.66
GFRA1P56159 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.69□□□□□ -1.66
GFRA1P56159 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.69□□□□□ -1.66
GFRA1P56159 FABP5P13-201ENST00000452144 328 ntBASIC4.69□□□□□ -1.66
GFRA1P56159 AC092647.2-201ENST00000452998 253 ntBASIC4.69□□□□□ -1.66
GFRA1P56159 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.69□□□□□ -1.66
GFRA1P56159 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.69□□□□□ -1.66
GFRA1P56159 RN7SL329P-201ENST00000467740 299 ntBASIC4.69□□□□□ -1.66
GFRA1P56159 AC097484.1-201ENST00000471148 389 ntBASIC4.69□□□□□ -1.66
GFRA1P56159 TRBV1-201ENST00000476502 284 ntBASIC4.69□□□□□ -1.66
GFRA1P56159 RPL7AP6-201ENST00000477943 801 ntBASIC4.69□□□□□ -1.66
GFRA1P56159 RN7SL814P-201ENST00000487715 300 ntBASIC4.69□□□□□ -1.66
GFRA1P56159 RN7SL808P-201ENST00000496066 299 ntBASIC4.69□□□□□ -1.66
GFRA1P56159 CCDC34P1-201ENST00000507441 517 ntBASIC4.69□□□□□ -1.66
GFRA1P56159 AC098591.2-201ENST00000510152 315 ntBASIC4.69□□□□□ -1.66
GFRA1P56159 RNU6-864P-201ENST00000516256 108 ntBASIC4.69□□□□□ -1.66
GFRA1P56159 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.69□□□□□ -1.66
GFRA1P56159 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.69□□□□□ -1.66
GFRA1P56159 HNRNPCP4-201ENST00000571636 900 ntBASIC4.69□□□□□ -1.66
GFRA1P56159 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.69□□□□□ -1.66
GFRA1P56159 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.69□□□□□ -1.66
GFRA1P56159 AC010680.4-201ENST00000605334 543 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms