Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SUMO3P55854 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
SUMO3P55854 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.17□□□□□ -1.74
SUMO3P55854 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.17□□□□□ -1.74
SUMO3P55854 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
SUMO3P55854 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SUMO3P55854 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.17□□□□□ -1.74
SUMO3P55854 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.17□□□□□ -1.74
SUMO3P55854 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SUMO3P55854 U3.11-201ENST00000364476 212 ntBASIC4.17□□□□□ -1.74
SUMO3P55854 RNU6-282P-201ENST00000365357 103 ntBASIC4.17□□□□□ -1.74
SUMO3P55854 SNORA70F-201ENST00000384142 135 ntBASIC4.17□□□□□ -1.74
SUMO3P55854 MTCO3P40-201ENST00000392516 676 ntBASIC4.17□□□□□ -1.74
SUMO3P55854 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SUMO3P55854 RN7SKP106-201ENST00000410832 272 ntBASIC4.17□□□□□ -1.74
SUMO3P55854 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.17□□□□□ -1.74
SUMO3P55854 AL590139.1-201ENST00000416267 400 ntBASIC4.17□□□□□ -1.74
SUMO3P55854 AC119751.6-201ENST00000416712 186 ntBASIC4.17□□□□□ -1.74
SUMO3P55854 SSXP9-201ENST00000417503 292 ntBASIC4.17□□□□□ -1.74
SUMO3P55854 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.17□□□□□ -1.74
SUMO3P55854 AC090774.1-201ENST00000435925 246 ntBASIC4.17□□□□□ -1.74
SUMO3P55854 AC004866.2-201ENST00000438285 481 ntBASIC4.17□□□□□ -1.74
SUMO3P55854 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.17□□□□□ -1.74
SUMO3P55854 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.17□□□□□ -1.74
SUMO3P55854 AL645939.1-201ENST00000453429 797 ntBASIC4.17□□□□□ -1.74
SUMO3P55854 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.17□□□□□ -1.74
SUMO3P55854 snoU13.24-201ENST00000458998 104 ntBASIC4.17□□□□□ -1.74
SUMO3P55854 AL049714.1-201ENST00000466686 347 ntBASIC4.17□□□□□ -1.74
SUMO3P55854 RPL23AP2-201ENST00000471227 466 ntBASIC4.17□□□□□ -1.74
SUMO3P55854 S100A11P1-201ENST00000477525 312 ntBASIC4.17□□□□□ -1.74
SUMO3P55854 AC083829.1-201ENST00000503756 657 ntBASIC4.17□□□□□ -1.74
SUMO3P55854 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.17□□□□□ -1.74
SUMO3P55854 MTCYBP41-201ENST00000528913 1123 ntBASIC4.17□□□□□ -1.74
SUMO3P55854 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SUMO3P55854 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.17□□□□□ -1.74
SUMO3P55854 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.17□□□□□ -1.74
SUMO3P55854 AC209154.1-201ENST00000582156 337 ntBASIC4.17□□□□□ -1.74
SUMO3P55854 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.17□□□□□ -1.74
SUMO3P55854 AC005255.1-201ENST00000593748 216 ntBASIC4.17□□□□□ -1.74
SUMO3P55854 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.17□□□□□ -1.74
SUMO3P55854 AC103710.2-201ENST00000609912 942 ntBASIC4.17□□□□□ -1.74
SUMO3P55854 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.17□□□□□ -1.74
SUMO3P55854 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.17□□□□□ -1.74
SUMO3P55854 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.17□□□□□ -1.74
SUMO3P55854 AC140113.4-201ENST00000622087 222 ntBASIC4.17□□□□□ -1.74
SUMO3P55854 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SUMO3P55854 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SUMO3P55854 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.17□□□□□ -1.74
SUMO3P55854 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.17□□□□□ -1.74
SUMO3P55854 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SUMO3P55854 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SUMO3P55854 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SUMO3P55854 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.16□□□□□ -1.74
SUMO3P55854 AC138915.3-201ENST00000562908 1389 ntBASIC4.16□□□□□ -1.74
SUMO3P55854 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.16□□□□□ -1.74
SUMO3P55854 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.16□□□□□ -1.74
SUMO3P55854 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.16□□□□□ -1.74
SUMO3P55854 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SUMO3P55854 OR4K15-201ENST00000305051 1216 ntBASIC4.16□□□□□ -1.74
SUMO3P55854 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SUMO3P55854 Y_RNA.1-201ENST00000352915 104 ntBASIC4.16□□□□□ -1.74
SUMO3P55854 RNU5E-8P-201ENST00000363502 116 ntBASIC4.16□□□□□ -1.74
SUMO3P55854 RNVU1-6-201ENST00000364688 164 ntBASIC4.16□□□□□ -1.74
SUMO3P55854 UBBP2-201ENST00000376781 231 ntBASIC4.16□□□□□ -1.74
SUMO3P55854 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SUMO3P55854 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.16□□□□□ -1.74
SUMO3P55854 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.16□□□□□ -1.74
SUMO3P55854 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.16□□□□□ -1.74
SUMO3P55854 DPPA2P1-201ENST00000428060 556 ntBASIC4.16□□□□□ -1.74
SUMO3P55854 RPL21P91-201ENST00000429231 479 ntBASIC4.16□□□□□ -1.74
SUMO3P55854 RPL23AP25-201ENST00000430973 463 ntBASIC4.16□□□□□ -1.74
SUMO3P55854 AC002486.1-201ENST00000435098 391 ntBASIC4.16□□□□□ -1.74
SUMO3P55854 AC005094.1-201ENST00000440420 368 ntBASIC4.16□□□□□ -1.74
SUMO3P55854 AC016696.1-201ENST00000446949 318 ntBASIC4.16□□□□□ -1.74
SUMO3P55854 AC073264.2-201ENST00000448886 166 ntBASIC4.16□□□□□ -1.74
SUMO3P55854 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.16□□□□□ -1.74
SUMO3P55854 RPS24P6-201ENST00000452670 400 ntBASIC4.16□□□□□ -1.74
SUMO3P55854 RPS15AP36-201ENST00000492022 382 ntBASIC4.16□□□□□ -1.74
SUMO3P55854 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.16□□□□□ -1.74
SUMO3P55854 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SUMO3P55854 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.16□□□□□ -1.74
SUMO3P55854 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.16□□□□□ -1.74
SUMO3P55854 AC011352.1-201ENST00000512300 793 ntBASIC4.16□□□□□ -1.74
SUMO3P55854 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.16□□□□□ -1.74
SUMO3P55854 AP001893.2-201ENST00000526949 202 ntBASIC4.16□□□□□ -1.74
SUMO3P55854 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.16□□□□□ -1.74
SUMO3P55854 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.16□□□□□ -1.74
SUMO3P55854 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.16□□□□□ -1.74
SUMO3P55854 AC125611.2-201ENST00000551907 647 ntBASIC4.16□□□□□ -1.74
SUMO3P55854 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.16□□□□□ -1.74
SUMO3P55854 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC4.16□□□□□ -1.74
SUMO3P55854 MIR4443-201ENST00000585052 53 ntBASIC4.16□□□□□ -1.74
SUMO3P55854 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.16□□□□□ -1.74
SUMO3P55854 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.16□□□□□ -1.74
SUMO3P55854 RPL7P50-201ENST00000600588 727 ntBASIC4.16□□□□□ -1.74
SUMO3P55854 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.16□□□□□ -1.74
SUMO3P55854 AL022099.1-201ENST00000604551 712 ntBASIC4.16□□□□□ -1.74
SUMO3P55854 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SUMO3P55854 AL359880.1-201ENST00000621879 266 ntBASIC4.16□□□□□ -1.74
SUMO3P55854 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms