Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 RNU6-295P-201ENST00000516901 104 ntBASIC2.96□□□□□ -1.94
CLTCL1P53675 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.96□□□□□ -1.94
CLTCL1P53675 AMZ2P1-203ENST00000565833 850 ntBASIC2.96□□□□□ -1.94
CLTCL1P53675 AL022099.1-201ENST00000604551 712 ntBASIC2.96□□□□□ -1.94
CLTCL1P53675 AC131902.3-201ENST00000611767 581 ntBASIC2.96□□□□□ -1.94
CLTCL1P53675 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
CLTCL1P53675 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CLTCL1P53675 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CLTCL1P53675 U3.37-201ENST00000408528 213 ntBASIC2.95□□□□□ -1.94
CLTCL1P53675 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.95□□□□□ -1.94
CLTCL1P53675 AC005005.2-201ENST00000420779 380 ntBASIC2.95□□□□□ -1.94
CLTCL1P53675 AC005517.2-201ENST00000424673 553 ntBASIC2.95□□□□□ -1.94
CLTCL1P53675 RPL23AP70-201ENST00000483361 460 ntBASIC2.95□□□□□ -1.94
CLTCL1P53675 AP000889.2-201ENST00000532684 490 ntBASIC2.95□□□□□ -1.94
CLTCL1P53675 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.95□□□□□ -1.94
CLTCL1P53675 GMCL1P2-201ENST00000605230 823 ntBASIC2.95□□□□□ -1.94
CLTCL1P53675 AC120053.1-201ENST00000607706 736 ntBASIC2.95□□□□□ -1.94
CLTCL1P53675 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC2.95□□□□□ -1.94
CLTCL1P53675 AC244517.12-201ENST00000623581 663 ntBASIC2.95□□□□□ -1.94
CLTCL1P53675 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.95□□□□□ -1.94
CLTCL1P53675 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CLTCL1P53675 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
CLTCL1P53675 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.94□□□□□ -1.94
CLTCL1P53675 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CLTCL1P53675 Y_RNA.164-201ENST00000363709 102 ntBASIC2.94□□□□□ -1.94
CLTCL1P53675 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.94□□□□□ -1.94
CLTCL1P53675 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.94□□□□□ -1.94
CLTCL1P53675 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.94□□□□□ -1.94
CLTCL1P53675 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC2.94□□□□□ -1.94
CLTCL1P53675 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.94□□□□□ -1.94
CLTCL1P53675 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.94□□□□□ -1.94
CLTCL1P53675 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.94□□□□□ -1.94
CLTCL1P53675 AC104986.1-201ENST00000517978 436 ntBASIC2.94□□□□□ -1.94
CLTCL1P53675 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.94□□□□□ -1.94
CLTCL1P53675 XIST_intron.1-201ENST00000619444 68 ntBASIC2.94□□□□□ -1.94
CLTCL1P53675 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC2.94□□□□□ -1.94
CLTCL1P53675 RPL23AP61-201ENST00000623642 466 ntBASIC2.94□□□□□ -1.94
CLTCL1P53675 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.94□□□□□ -1.94
CLTCL1P53675 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
CLTCL1P53675 Y_RNA.140-201ENST00000363474 103 ntBASIC2.93□□□□□ -1.94
CLTCL1P53675 BTBD10P2-201ENST00000404779 676 ntBASIC2.93□□□□□ -1.94
CLTCL1P53675 AC013470.3-201ENST00000420252 1194 ntBASIC2.93□□□□□ -1.94
CLTCL1P53675 HMGB1P48-201ENST00000446155 598 ntBASIC2.93□□□□□ -1.94
CLTCL1P53675 AL445669.2-201ENST00000454425 421 ntBASIC2.93□□□□□ -1.94
CLTCL1P53675 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.93□□□□□ -1.94
CLTCL1P53675 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.93□□□□□ -1.94
CLTCL1P53675 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.93□□□□□ -1.94
CLTCL1P53675 AC034268.2-201ENST00000571784 482 ntBASIC2.93□□□□□ -1.94
CLTCL1P53675 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
CLTCL1P53675 AC011460.1-201ENST00000636268 1834 ntBASIC2.93□□□□□ -1.94
CLTCL1P53675 WWP1P1-201ENST00000466609 2769 ntBASIC2.93□□□□□ -1.94
CLTCL1P53675 AC010680.1-201ENST00000590024 3590 ntBASIC2.93□□□□□ -1.94
CLTCL1P53675 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CLTCL1P53675 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CLTCL1P53675 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CLTCL1P53675 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CLTCL1P53675 Y_RNA.338-201ENST00000365320 114 ntBASIC2.93□□□□□ -1.94
CLTCL1P53675 Y_RNA.595-201ENST00000410403 105 ntBASIC2.93□□□□□ -1.94
CLTCL1P53675 AC072039.1-201ENST00000477611 581 ntBASIC2.93□□□□□ -1.94
CLTCL1P53675 AC117522.2-201ENST00000510049 657 ntBASIC2.93□□□□□ -1.94
CLTCL1P53675 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.93□□□□□ -1.94
CLTCL1P53675 AC011494.1-201ENST00000596454 237 ntBASIC2.93□□□□□ -1.94
CLTCL1P53675 AC073387.2-201ENST00000604797 784 ntBASIC2.93□□□□□ -1.94
CLTCL1P53675 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.93□□□□□ -1.94
CLTCL1P53675 AF127577.6-201ENST00000623352 2191 ntBASIC2.93□□□□□ -1.94
CLTCL1P53675 AC093909.5-201ENST00000621839 1799 ntBASIC2.93□□□□□ -1.94
CLTCL1P53675 SDR42E1P3-201ENST00000438345 502 ntBASIC2.92□□□□□ -1.94
CLTCL1P53675 AC007677.1-201ENST00000445757 515 ntBASIC2.92□□□□□ -1.94
CLTCL1P53675 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.92□□□□□ -1.94
CLTCL1P53675 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.92□□□□□ -1.94
CLTCL1P53675 AL645939.1-201ENST00000453429 797 ntBASIC2.92□□□□□ -1.94
CLTCL1P53675 RN7SKP210-201ENST00000459176 261 ntBASIC2.92□□□□□ -1.94
CLTCL1P53675 AC089999.1-201ENST00000460336 374 ntBASIC2.92□□□□□ -1.94
CLTCL1P53675 OR4T1P-201ENST00000554933 911 ntBASIC2.92□□□□□ -1.94
CLTCL1P53675 AC110588.1-201ENST00000559699 137 ntBASIC2.92□□□□□ -1.94
CLTCL1P53675 AC005951.1-201ENST00000576706 485 ntBASIC2.92□□□□□ -1.94
CLTCL1P53675 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.92□□□□□ -1.94
CLTCL1P53675 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
CLTCL1P53675 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CLTCL1P53675 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CLTCL1P53675 RNA5SP181-201ENST00000410246 98 ntBASIC2.91□□□□□ -1.94
CLTCL1P53675 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
CLTCL1P53675 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.91□□□□□ -1.94
CLTCL1P53675 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CLTCL1P53675 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
CLTCL1P53675 MIR9-3-201ENST00000385084 90 ntBASIC2.9□□□□□ -1.94
CLTCL1P53675 CYCSP49-201ENST00000420810 319 ntBASIC2.9□□□□□ -1.94
CLTCL1P53675 ATP5F1P1-201ENST00000433775 569 ntBASIC2.9□□□□□ -1.94
CLTCL1P53675 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.9□□□□□ -1.94
CLTCL1P53675 MIR4498-201ENST00000577599 66 ntBASIC2.9□□□□□ -1.94
CLTCL1P53675 AL512643.1-201ENST00000635735 524 ntBASIC2.9□□□□□ -1.94
CLTCL1P53675 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
CLTCL1P53675 AC244517.1-201ENST00000606030 2086 ntBASIC2.9□□□□□ -1.95
CLTCL1P53675 AL359893.1-201ENST00000447628 1580 ntBASIC2.9□□□□□ -1.95
CLTCL1P53675 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.9□□□□□ -1.95
CLTCL1P53675 AC129850.1-201ENST00000436203 508 ntBASIC2.9□□□□□ -1.95
CLTCL1P53675 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC2.9□□□□□ -1.95
CLTCL1P53675 CBWD4P-201ENST00000445695 655 ntBASIC2.9□□□□□ -1.95
CLTCL1P53675 RPS29P11-201ENST00000496507 171 ntBASIC2.9□□□□□ -1.95
CLTCL1P53675 AP000926.3-201ENST00000497201 299 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms