Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.21□□□□□ -2.06
BRCA2P51587 AP000942.1-201ENST00000463969 747 ntBASIC2.21□□□□□ -2.06
BRCA2P51587 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.21□□□□□ -2.06
BRCA2P51587 AC055876.1-202ENST00000567053 138 ntBASIC2.21□□□□□ -2.06
BRCA2P51587 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC2.21□□□□□ -2.06
BRCA2P51587 U8.8-201ENST00000365399 135 ntBASIC2.2□□□□□ -2.06
BRCA2P51587 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.2□□□□□ -2.06
BRCA2P51587 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.2□□□□□ -2.06
BRCA2P51587 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.2□□□□□ -2.06
BRCA2P51587 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.2□□□□□ -2.06
BRCA2P51587 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.2□□□□□ -2.06
BRCA2P51587 RNA5SP380-201ENST00000517190 98 ntBASIC2.2□□□□□ -2.06
BRCA2P51587 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.2□□□□□ -2.06
BRCA2P51587 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.2□□□□□ -2.06
BRCA2P51587 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.2□□□□□ -2.06
BRCA2P51587 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.2□□□□□ -2.06
BRCA2P51587 AC020633.1-201ENST00000468439 2247 ntBASIC2.2□□□□□ -2.06
BRCA2P51587 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
BRCA2P51587 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
BRCA2P51587 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
BRCA2P51587 AC005005.2-201ENST00000420779 380 ntBASIC2.2□□□□□ -2.06
BRCA2P51587 RNA5SP102-201ENST00000516865 106 ntBASIC2.2□□□□□ -2.06
BRCA2P51587 AC005951.1-201ENST00000576706 485 ntBASIC2.2□□□□□ -2.06
BRCA2P51587 AC131238.1-201ENST00000617135 328 ntBASIC2.2□□□□□ -2.06
BRCA2P51587 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
BRCA2P51587 API5P2-201ENST00000397055 1498 ntBASIC2.2□□□□□ -2.06
BRCA2P51587 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.2□□□□□ -2.06
BRCA2P51587 RNU4-74P-201ENST00000411280 161 ntBASIC2.2□□□□□ -2.06
BRCA2P51587 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.2□□□□□ -2.06
BRCA2P51587 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.2□□□□□ -2.06
BRCA2P51587 UBE2V1P5-201ENST00000440070 405 ntBASIC2.2□□□□□ -2.06
BRCA2P51587 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.2□□□□□ -2.06
BRCA2P51587 OR4R2P-201ENST00000530815 597 ntBASIC2.2□□□□□ -2.06
BRCA2P51587 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
BRCA2P51587 AC009237.8-201ENST00000445492 379 ntBASIC2.19□□□□□ -2.06
BRCA2P51587 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.19□□□□□ -2.06
BRCA2P51587 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.19□□□□□ -2.06
BRCA2P51587 AL512598.1-201ENST00000610158 273 ntBASIC2.19□□□□□ -2.06
BRCA2P51587 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
BRCA2P51587 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
BRCA2P51587 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
BRCA2P51587 RPS3AP9-201ENST00000417027 792 ntBASIC2.19□□□□□ -2.06
BRCA2P51587 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.19□□□□□ -2.06
BRCA2P51587 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.19□□□□□ -2.06
BRCA2P51587 MTND4LP16-201ENST00000440828 295 ntBASIC2.19□□□□□ -2.06
BRCA2P51587 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.19□□□□□ -2.06
BRCA2P51587 RNA5SP76-201ENST00000516277 87 ntBASIC2.19□□□□□ -2.06
BRCA2P51587 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.19□□□□□ -2.06
BRCA2P51587 HIGD1AP10-201ENST00000527837 282 ntBASIC2.19□□□□□ -2.06
BRCA2P51587 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
BRCA2P51587 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
BRCA2P51587 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
BRCA2P51587 AL358075.3-201ENST00000426289 226 ntBASIC2.19□□□□□ -2.06
BRCA2P51587 AC034244.1-201ENST00000507687 207 ntBASIC2.19□□□□□ -2.06
BRCA2P51587 RNU6-250P-201ENST00000516958 103 ntBASIC2.19□□□□□ -2.06
BRCA2P51587 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.19□□□□□ -2.06
BRCA2P51587 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC2.18□□□□□ -2.06
BRCA2P51587 SNORD21-201ENST00000383953 95 ntBASIC2.18□□□□□ -2.06
BRCA2P51587 RNU2-6P-201ENST00000411404 190 ntBASIC2.18□□□□□ -2.06
BRCA2P51587 RPL7P37-201ENST00000425095 738 ntBASIC2.18□□□□□ -2.06
BRCA2P51587 HMGN1P33-201ENST00000432945 451 ntBASIC2.18□□□□□ -2.06
BRCA2P51587 AL445669.2-201ENST00000454425 421 ntBASIC2.18□□□□□ -2.06
BRCA2P51587 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC2.18□□□□□ -2.06
BRCA2P51587 AC021146.8-201ENST00000507455 733 ntBASIC2.18□□□□□ -2.06
BRCA2P51587 HMGB1P41-201ENST00000520234 440 ntBASIC2.18□□□□□ -2.06
BRCA2P51587 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.18□□□□□ -2.06
BRCA2P51587 PSMA6P4-201ENST00000603247 718 ntBASIC2.18□□□□□ -2.06
BRCA2P51587 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.18□□□□□ -2.06
BRCA2P51587 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
BRCA2P51587 CDC27P2-201ENST00000425026 1922 ntBASIC2.18□□□□□ -2.06
BRCA2P51587 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
BRCA2P51587 SNORA67.5-201ENST00000391036 107 ntBASIC2.18□□□□□ -2.06
BRCA2P51587 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.18□□□□□ -2.06
BRCA2P51587 AL590762.3-201ENST00000436372 640 ntBASIC2.18□□□□□ -2.06
BRCA2P51587 RPS27P29-201ENST00000463110 252 ntBASIC2.18□□□□□ -2.06
BRCA2P51587 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.18□□□□□ -2.06
BRCA2P51587 RNU6-1231P-201ENST00000517185 103 ntBASIC2.18□□□□□ -2.06
BRCA2P51587 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.18□□□□□ -2.06
BRCA2P51587 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.18□□□□□ -2.06
BRCA2P51587 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.18□□□□□ -2.06
BRCA2P51587 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
BRCA2P51587 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC2.17□□□□□ -2.06
BRCA2P51587 RNU1-123P-201ENST00000458950 160 ntBASIC2.17□□□□□ -2.06
BRCA2P51587 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.17□□□□□ -2.06
BRCA2P51587 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
BRCA2P51587 AC244517.12-201ENST00000623581 663 ntBASIC2.17□□□□□ -2.06
BRCA2P51587 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
BRCA2P51587 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
BRCA2P51587 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
BRCA2P51587 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.17□□□□□ -2.06
BRCA2P51587 MTND2P29-201ENST00000438595 412 ntBASIC2.17□□□□□ -2.06
BRCA2P51587 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.17□□□□□ -2.06
BRCA2P51587 CBX3P4-201ENST00000538909 354 ntBASIC2.17□□□□□ -2.06
BRCA2P51587 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.17□□□□□ -2.06
BRCA2P51587 CYP3A51P-201ENST00000633513 256 ntBASIC2.17□□□□□ -2.06
BRCA2P51587 EXOC5P1-201ENST00000510543 1969 ntBASIC2.17□□□□□ -2.06
BRCA2P51587 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
BRCA2P51587 SNORA48.3-201ENST00000391081 134 ntBASIC2.17□□□□□ -2.06
BRCA2P51587 YWHAZP7-201ENST00000436906 631 ntBASIC2.17□□□□□ -2.06
BRCA2P51587 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms