Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 Y_RNA.813-201ENST00000364639 102 ntBASIC5.08□□□□□ -1.6
MRE11P49959 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
MRE11P49959 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC5.08□□□□□ -1.6
MRE11P49959 MIR92A2-201ENST00000385299 75 ntBASIC5.08□□□□□ -1.6
MRE11P49959 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.08□□□□□ -1.6
MRE11P49959 CALM2P3-201ENST00000400429 449 ntBASIC5.08□□□□□ -1.6
MRE11P49959 AL049697.2-201ENST00000403708 294 ntBASIC5.08□□□□□ -1.6
MRE11P49959 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC5.08□□□□□ -1.6
MRE11P49959 BX510359.2-201ENST00000417920 305 ntBASIC5.08□□□□□ -1.6
MRE11P49959 AC245054.1-201ENST00000420944 258 ntBASIC5.08□□□□□ -1.6
MRE11P49959 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.08□□□□□ -1.6
MRE11P49959 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC5.08□□□□□ -1.6
MRE11P49959 BX890604.2-201ENST00000427883 474 ntBASIC5.08□□□□□ -1.6
MRE11P49959 NPM1P24-201ENST00000428039 894 ntBASIC5.08□□□□□ -1.6
MRE11P49959 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.08□□□□□ -1.6
MRE11P49959 AF228730.2-201ENST00000438784 848 ntBASIC5.08□□□□□ -1.6
MRE11P49959 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC5.08□□□□□ -1.6
MRE11P49959 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.08□□□□□ -1.6
MRE11P49959 RGS5-217ENST00000451759 835 ntTSL 3 BASIC5.08□□□□□ -1.6
MRE11P49959 AC092001.1-201ENST00000453012 261 ntBASIC5.08□□□□□ -1.6
MRE11P49959 KLRA1P-201ENST00000503499 986 ntBASIC5.08□□□□□ -1.6
MRE11P49959 AC019235.1-201ENST00000503847 207 ntBASIC5.08□□□□□ -1.6
MRE11P49959 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.08□□□□□ -1.6
MRE11P49959 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
MRE11P49959 AC091868.1-201ENST00000508746 304 ntBASIC5.08□□□□□ -1.6
MRE11P49959 AC093809.1-201ENST00000509155 340 ntBASIC5.08□□□□□ -1.6
MRE11P49959 SNORD116-26-201ENST00000516006 96 ntBASIC5.08□□□□□ -1.6
MRE11P49959 RNU6-150P-201ENST00000516237 95 ntBASIC5.08□□□□□ -1.6
MRE11P49959 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.08□□□□□ -1.6
MRE11P49959 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC5.08□□□□□ -1.6
MRE11P49959 AC104383.1-201ENST00000530297 370 ntBASIC5.08□□□□□ -1.6
MRE11P49959 AC013828.2-201ENST00000532487 235 ntBASIC5.08□□□□□ -1.6
MRE11P49959 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.08□□□□□ -1.6
MRE11P49959 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.08□□□□□ -1.6
MRE11P49959 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.08□□□□□ -1.6
MRE11P49959 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.08□□□□□ -1.6
MRE11P49959 MIR3138-201ENST00000585238 82 ntBASIC5.08□□□□□ -1.6
MRE11P49959 AC009977.1-201ENST00000586015 570 ntBASIC5.08□□□□□ -1.6
MRE11P49959 AC112230.1-201ENST00000604342 547 ntBASIC5.08□□□□□ -1.6
MRE11P49959 AP003117.2-201ENST00000606010 545 ntBASIC5.08□□□□□ -1.6
MRE11P49959 AC009994.1-201ENST00000606889 253 ntBASIC5.08□□□□□ -1.6
MRE11P49959 Z98200.1-201ENST00000607298 470 ntBASIC5.08□□□□□ -1.6
MRE11P49959 AC097468.3-201ENST00000607956 456 ntBASIC5.08□□□□□ -1.6
MRE11P49959 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.08□□□□□ -1.6
MRE11P49959 AC243773.3-201ENST00000613270 256 ntBASIC5.08□□□□□ -1.6
MRE11P49959 AC104260.1-201ENST00000616660 539 ntBASIC5.08□□□□□ -1.6
MRE11P49959 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.08□□□□□ -1.6
MRE11P49959 AC012150.2-201ENST00000621300 544 ntBASIC5.08□□□□□ -1.6
MRE11P49959 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.08□□□□□ -1.6
MRE11P49959 RNA5SP196-201ENST00000625967 102 ntBASIC5.08□□□□□ -1.6
MRE11P49959 TEX41-265ENST00000627785 704 ntTSL 5 BASIC5.08□□□□□ -1.6
MRE11P49959 LRRC77P-213ENST00000637727 880 ntBASIC5.08□□□□□ -1.6
MRE11P49959 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.08□□□□□ -1.6
MRE11P49959 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
MRE11P49959 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
MRE11P49959 SNORA63.1-201ENST00000362493 131 ntBASIC5.07□□□□□ -1.6
MRE11P49959 RPS26P8-201ENST00000393490 348 ntBASIC5.07□□□□□ -1.6
MRE11P49959 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
MRE11P49959 RPS3AP36-201ENST00000398190 775 ntBASIC5.07□□□□□ -1.6
MRE11P49959 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
MRE11P49959 GSTA9P-201ENST00000406231 611 ntBASIC5.07□□□□□ -1.6
MRE11P49959 AC114755.2-201ENST00000413520 361 ntBASIC5.07□□□□□ -1.6
MRE11P49959 AC069157.1-201ENST00000421749 137 ntBASIC5.07□□□□□ -1.6
MRE11P49959 AC109583.1-201ENST00000432156 268 ntBASIC5.07□□□□□ -1.6
MRE11P49959 AC005154.2-201ENST00000438110 379 ntBASIC5.07□□□□□ -1.6
MRE11P49959 RPS4XP4-201ENST00000443195 763 ntBASIC5.07□□□□□ -1.6
MRE11P49959 RPS3AP12-201ENST00000443616 753 ntBASIC5.07□□□□□ -1.6
MRE11P49959 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.07□□□□□ -1.6
MRE11P49959 DPPA3P1-201ENST00000448050 469 ntBASIC5.07□□□□□ -1.6
MRE11P49959 AL590365.1-201ENST00000450788 243 ntBASIC5.07□□□□□ -1.6
MRE11P49959 AC010683.1-201ENST00000473673 378 ntBASIC5.07□□□□□ -1.6
MRE11P49959 ACTR3P3-201ENST00000480448 893 ntBASIC5.07□□□□□ -1.6
MRE11P49959 AC006517.1-201ENST00000480485 328 ntBASIC5.07□□□□□ -1.6
MRE11P49959 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC5.07□□□□□ -1.6
MRE11P49959 MRPS33P2-201ENST00000507850 322 ntBASIC5.07□□□□□ -1.6
MRE11P49959 POU5F1P7-201ENST00000508759 541 ntBASIC5.07□□□□□ -1.6
MRE11P49959 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
MRE11P49959 AC046134.1-201ENST00000514454 666 ntBASIC5.07□□□□□ -1.6
MRE11P49959 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.07□□□□□ -1.6
MRE11P49959 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC5.07□□□□□ -1.6
MRE11P49959 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.07□□□□□ -1.6
MRE11P49959 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.07□□□□□ -1.6
MRE11P49959 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.07□□□□□ -1.6
MRE11P49959 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.07□□□□□ -1.6
MRE11P49959 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.07□□□□□ -1.6
MRE11P49959 MIR4307-201ENST00000582802 84 ntBASIC5.07□□□□□ -1.6
MRE11P49959 MIR4512-201ENST00000583257 77 ntBASIC5.07□□□□□ -1.6
MRE11P49959 BPIFA4P-203ENST00000603168 689 ntBASIC5.07□□□□□ -1.6
MRE11P49959 C8orf59P2-201ENST00000603441 271 ntBASIC5.07□□□□□ -1.6
MRE11P49959 ARF4P1-201ENST00000605447 541 ntBASIC5.07□□□□□ -1.6
MRE11P49959 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.07□□□□□ -1.6
MRE11P49959 DLEU1_2.1-201ENST00000617920 342 ntBASIC5.07□□□□□ -1.6
MRE11P49959 AC004009.2-201ENST00000623016 728 ntBASIC5.07□□□□□ -1.6
MRE11P49959 AC116563.2-201ENST00000624751 535 ntBASIC5.07□□□□□ -1.6
MRE11P49959 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC5.07□□□□□ -1.6
MRE11P49959 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC5.07□□□□□ -1.6
MRE11P49959 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
MRE11P49959 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
MRE11P49959 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
MRE11P49959 NOL8P1-201ENST00000508336 3529 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms