Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AC122133.1-201ENST00000613964 233 ntBASIC3.55□□□□□ -1.84
SLC6A12P48065 AC008083.4-201ENST00000615076 444 ntBASIC3.55□□□□□ -1.84
SLC6A12P48065 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
SLC6A12P48065 AL732618.1-201ENST00000623251 301 ntBASIC3.55□□□□□ -1.84
SLC6A12P48065 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.55□□□□□ -1.84
SLC6A12P48065 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.55□□□□□ -1.84
SLC6A12P48065 AL732372.2-225ENST00000642124 456 ntBASIC3.55□□□□□ -1.84
SLC6A12P48065 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SLC6A12P48065 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SLC6A12P48065 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
SLC6A12P48065 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SLC6A12P48065 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
SLC6A12P48065 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
SLC6A12P48065 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SLC6A12P48065 AC066616.2-201ENST00000559334 1481 ntBASIC3.54□□□□□ -1.84
SLC6A12P48065 AL445523.1-201ENST00000451184 1362 ntBASIC3.54□□□□□ -1.84
SLC6A12P48065 CEP170P1-201ENST00000502249 4587 ntBASIC3.54□□□□□ -1.84
SLC6A12P48065 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SLC6A12P48065 AC107982.1-201ENST00000507171 1300 ntBASIC3.54□□□□□ -1.84
SLC6A12P48065 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SLC6A12P48065 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SLC6A12P48065 RNU6-1249P-201ENST00000363237 111 ntBASIC3.54□□□□□ -1.84
SLC6A12P48065 RNA5SP42-201ENST00000364278 115 ntBASIC3.54□□□□□ -1.84
SLC6A12P48065 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
SLC6A12P48065 U8.11-201ENST00000384699 133 ntBASIC3.54□□□□□ -1.84
SLC6A12P48065 U8.12-201ENST00000384701 133 ntBASIC3.54□□□□□ -1.84
SLC6A12P48065 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
SLC6A12P48065 RNU6-821P-201ENST00000390995 107 ntBASIC3.54□□□□□ -1.84
SLC6A12P48065 AL024474.1-201ENST00000404655 591 ntBASIC3.54□□□□□ -1.84
SLC6A12P48065 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.54□□□□□ -1.84
SLC6A12P48065 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.54□□□□□ -1.84
SLC6A12P48065 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.54□□□□□ -1.84
SLC6A12P48065 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.54□□□□□ -1.84
SLC6A12P48065 Z95327.1-201ENST00000446082 482 ntBASIC3.54□□□□□ -1.84
SLC6A12P48065 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.54□□□□□ -1.84
SLC6A12P48065 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SLC6A12P48065 U8.18-201ENST00000459285 133 ntBASIC3.54□□□□□ -1.84
SLC6A12P48065 AC010285.1-201ENST00000470580 392 ntBASIC3.54□□□□□ -1.84
SLC6A12P48065 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SLC6A12P48065 AC068305.1-201ENST00000497406 726 ntBASIC3.54□□□□□ -1.84
SLC6A12P48065 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.54□□□□□ -1.84
SLC6A12P48065 AC093767.1-201ENST00000504523 156 ntBASIC3.54□□□□□ -1.84
SLC6A12P48065 LTV1P1-201ENST00000510683 1237 ntBASIC3.54□□□□□ -1.84
SLC6A12P48065 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.54□□□□□ -1.84
SLC6A12P48065 AC117532.1-201ENST00000514638 323 ntBASIC3.54□□□□□ -1.84
SLC6A12P48065 MTND4LP31-201ENST00000514859 294 ntBASIC3.54□□□□□ -1.84
SLC6A12P48065 SNORA70.14-201ENST00000516205 110 ntBASIC3.54□□□□□ -1.84
SLC6A12P48065 SNORA31.20-201ENST00000517111 133 ntBASIC3.54□□□□□ -1.84
SLC6A12P48065 AC027309.2-201ENST00000520566 192 ntBASIC3.54□□□□□ -1.84
SLC6A12P48065 AP001189.2-201ENST00000527320 189 ntBASIC3.54□□□□□ -1.84
SLC6A12P48065 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.54□□□□□ -1.84
SLC6A12P48065 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.54□□□□□ -1.84
SLC6A12P48065 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.54□□□□□ -1.84
SLC6A12P48065 AC074050.1-201ENST00000563247 211 ntBASIC3.54□□□□□ -1.84
SLC6A12P48065 MIR3915-201ENST00000578518 97 ntBASIC3.54□□□□□ -1.84
SLC6A12P48065 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.54□□□□□ -1.84
SLC6A12P48065 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.54□□□□□ -1.84
SLC6A12P48065 AC245389.1-201ENST00000605141 529 ntBASIC3.54□□□□□ -1.84
SLC6A12P48065 OR2AS2P-201ENST00000606902 342 ntBASIC3.54□□□□□ -1.84
SLC6A12P48065 AC090425.2-201ENST00000608818 501 ntBASIC3.54□□□□□ -1.84
SLC6A12P48065 AC006329.2-201ENST00000611491 394 ntBASIC3.54□□□□□ -1.84
SLC6A12P48065 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
SLC6A12P48065 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.54□□□□□ -1.84
SLC6A12P48065 AC120349.2-201ENST00000625002 298 ntBASIC3.54□□□□□ -1.84
SLC6A12P48065 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
SLC6A12P48065 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
SLC6A12P48065 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
SLC6A12P48065 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.54□□□□□ -1.84
SLC6A12P48065 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.54□□□□□ -1.84
SLC6A12P48065 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.53□□□□□ -1.84
SLC6A12P48065 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
SLC6A12P48065 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SLC6A12P48065 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SLC6A12P48065 ELL2P3-201ENST00000457883 1602 ntBASIC3.53□□□□□ -1.84
SLC6A12P48065 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SLC6A12P48065 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SLC6A12P48065 MIR554-201ENST00000384874 96 ntBASIC3.53□□□□□ -1.84
SLC6A12P48065 AC007066.1-201ENST00000392902 381 ntBASIC3.53□□□□□ -1.84
SLC6A12P48065 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.53□□□□□ -1.84
SLC6A12P48065 RNU2-71P-201ENST00000411395 189 ntBASIC3.53□□□□□ -1.84
SLC6A12P48065 CRYBB2P1-203ENST00000415709 538 ntBASIC3.53□□□□□ -1.84
SLC6A12P48065 RAD23BP2-201ENST00000416003 1207 ntBASIC3.53□□□□□ -1.84
SLC6A12P48065 SEPT2P1-201ENST00000419651 180 ntBASIC3.53□□□□□ -1.84
SLC6A12P48065 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.53□□□□□ -1.84
SLC6A12P48065 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.53□□□□□ -1.84
SLC6A12P48065 AC007389.2-201ENST00000434630 306 ntBASIC3.53□□□□□ -1.84
SLC6A12P48065 AL117351.1-201ENST00000438864 766 ntBASIC3.53□□□□□ -1.84
SLC6A12P48065 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.53□□□□□ -1.84
SLC6A12P48065 AC092473.1-201ENST00000441098 221 ntBASIC3.53□□□□□ -1.84
SLC6A12P48065 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.53□□□□□ -1.84
SLC6A12P48065 RPS20P24-201ENST00000457473 361 ntBASIC3.53□□□□□ -1.84
SLC6A12P48065 SNORA84-201ENST00000459229 133 ntBASIC3.53□□□□□ -1.84
SLC6A12P48065 PLGLA-201ENST00000465668 449 ntBASIC3.53□□□□□ -1.84
SLC6A12P48065 SETP11-201ENST00000473027 690 ntBASIC3.53□□□□□ -1.84
SLC6A12P48065 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.53□□□□□ -1.84
SLC6A12P48065 RPL30P6-201ENST00000475925 342 ntBASIC3.53□□□□□ -1.84
SLC6A12P48065 AC013828.1-201ENST00000481845 158 ntBASIC3.53□□□□□ -1.84
SLC6A12P48065 RPS4XP13-201ENST00000483219 789 ntBASIC3.53□□□□□ -1.84
SLC6A12P48065 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.53□□□□□ -1.84
SLC6A12P48065 AP002812.1-201ENST00000495378 474 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms