Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SCN4AP35499 AC009487.4-201ENST00000624969 3585 ntBASIC2.94□□□□□ -1.94
SCN4AP35499 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SCN4AP35499 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.94□□□□□ -1.94
SCN4AP35499 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SCN4AP35499 AC022336.2-201ENST00000568966 2538 ntBASIC2.94□□□□□ -1.94
SCN4AP35499 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SCN4AP35499 SNORA25.6-201ENST00000364121 118 ntBASIC2.93□□□□□ -1.94
SCN4AP35499 AL512633.1-201ENST00000399931 655 ntBASIC2.93□□□□□ -1.94
SCN4AP35499 AL024474.1-201ENST00000404655 591 ntBASIC2.93□□□□□ -1.94
SCN4AP35499 AL451074.5-201ENST00000415894 435 ntBASIC2.93□□□□□ -1.94
SCN4AP35499 CR848007.2-201ENST00000424918 787 ntBASIC2.93□□□□□ -1.94
SCN4AP35499 MTND4LP14-201ENST00000429447 288 ntBASIC2.93□□□□□ -1.94
SCN4AP35499 AC104389.3-201ENST00000445629 235 ntBASIC2.93□□□□□ -1.94
SCN4AP35499 CLIC4P1-201ENST00000453177 535 ntBASIC2.93□□□□□ -1.94
SCN4AP35499 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC2.93□□□□□ -1.94
SCN4AP35499 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC2.93□□□□□ -1.94
SCN4AP35499 AP001004.1-201ENST00000582468 324 ntBASIC2.93□□□□□ -1.94
SCN4AP35499 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.93□□□□□ -1.94
SCN4AP35499 AC010200.2-201ENST00000605098 235 ntBASIC2.93□□□□□ -1.94
SCN4AP35499 AC116447.1-201ENST00000613153 453 ntBASIC2.93□□□□□ -1.94
SCN4AP35499 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC2.93□□□□□ -1.94
SCN4AP35499 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SCN4AP35499 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SCN4AP35499 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SCN4AP35499 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SCN4AP35499 RNU6-883P-201ENST00000384597 107 ntBASIC2.93□□□□□ -1.94
SCN4AP35499 USP9YP20-201ENST00000419224 558 ntBASIC2.93□□□□□ -1.94
SCN4AP35499 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.93□□□□□ -1.94
SCN4AP35499 MTCYBP31-201ENST00000438855 1122 ntBASIC2.93□□□□□ -1.94
SCN4AP35499 AL513343.1-201ENST00000451818 792 ntBASIC2.93□□□□□ -1.94
SCN4AP35499 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC2.93□□□□□ -1.94
SCN4AP35499 RPL23AP70-201ENST00000483361 460 ntBASIC2.93□□□□□ -1.94
SCN4AP35499 MTCO1P31-201ENST00000506355 492 ntBASIC2.93□□□□□ -1.94
SCN4AP35499 AC027338.1-201ENST00000514840 825 ntBASIC2.93□□□□□ -1.94
SCN4AP35499 IGHVIII-38-1-201ENST00000521454 282 ntBASIC2.93□□□□□ -1.94
SCN4AP35499 AC026616.1-201ENST00000523157 525 ntBASIC2.93□□□□□ -1.94
SCN4AP35499 CIR1P1-201ENST00000524055 1133 ntBASIC2.93□□□□□ -1.94
SCN4AP35499 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC2.93□□□□□ -1.94
SCN4AP35499 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.93□□□□□ -1.94
SCN4AP35499 AL049870.4-201ENST00000555741 486 ntBASIC2.93□□□□□ -1.94
SCN4AP35499 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC2.93□□□□□ -1.94
SCN4AP35499 AC006116.7-201ENST00000590141 756 ntBASIC2.93□□□□□ -1.94
SCN4AP35499 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.93□□□□□ -1.94
SCN4AP35499 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC2.93□□□□□ -1.94
SCN4AP35499 AC010620.2-201ENST00000600135 313 ntBASIC2.93□□□□□ -1.94
SCN4AP35499 AC123786.2-201ENST00000603459 275 ntBASIC2.93□□□□□ -1.94
SCN4AP35499 OR4H6P-202ENST00000603819 340 ntBASIC2.93□□□□□ -1.94
SCN4AP35499 AC011374.2-201ENST00000607135 526 ntBASIC2.93□□□□□ -1.94
SCN4AP35499 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC2.93□□□□□ -1.94
SCN4AP35499 VN1R9P-201ENST00000614184 867 ntBASIC2.93□□□□□ -1.94
SCN4AP35499 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.93□□□□□ -1.94
SCN4AP35499 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.93□□□□□ -1.94
SCN4AP35499 MTND4P21-201ENST00000453886 1357 ntBASIC2.92□□□□□ -1.94
SCN4AP35499 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.92□□□□□ -1.94
SCN4AP35499 RNU6-650P-201ENST00000365658 111 ntBASIC2.92□□□□□ -1.94
SCN4AP35499 EIF5P1-201ENST00000400019 1231 ntBASIC2.92□□□□□ -1.94
SCN4AP35499 GSTA9P-201ENST00000406231 611 ntBASIC2.92□□□□□ -1.94
SCN4AP35499 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC2.92□□□□□ -1.94
SCN4AP35499 MTND4P11-201ENST00000417020 1058 ntBASIC2.92□□□□□ -1.94
SCN4AP35499 SAR1AP4-201ENST00000429225 591 ntBASIC2.92□□□□□ -1.94
SCN4AP35499 MTND2P8-201ENST00000450555 1025 ntBASIC2.92□□□□□ -1.94
SCN4AP35499 AC008571.1-201ENST00000467232 300 ntBASIC2.92□□□□□ -1.94
SCN4AP35499 RPL23AP42-201ENST00000471152 471 ntBASIC2.92□□□□□ -1.94
SCN4AP35499 AC111193.1-201ENST00000504097 155 ntBASIC2.92□□□□□ -1.94
SCN4AP35499 RN7SKP219-201ENST00000516825 296 ntBASIC2.92□□□□□ -1.94
SCN4AP35499 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC2.92□□□□□ -1.94
SCN4AP35499 AL355836.1-201ENST00000555951 870 ntBASIC2.92□□□□□ -1.94
SCN4AP35499 AC068714.1-201ENST00000559623 800 ntBASIC2.92□□□□□ -1.94
SCN4AP35499 KATNBL1P5-201ENST00000605015 517 ntBASIC2.92□□□□□ -1.94
SCN4AP35499 AL021368.1-201ENST00000607490 540 ntBASIC2.92□□□□□ -1.94
SCN4AP35499 AC104237.2-201ENST00000612456 443 ntBASIC2.92□□□□□ -1.94
SCN4AP35499 AL118556.2-201ENST00000614375 824 ntBASIC2.92□□□□□ -1.94
SCN4AP35499 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.92□□□□□ -1.94
SCN4AP35499 AC048347.1-201ENST00000624621 427 ntBASIC2.92□□□□□ -1.94
SCN4AP35499 SNORA50A-202ENST00000629536 136 ntBASIC2.92□□□□□ -1.94
SCN4AP35499 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SCN4AP35499 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SCN4AP35499 METTL21EP-201ENST00000298105 713 ntBASIC2.91□□□□□ -1.94
SCN4AP35499 Y_RNA.140-201ENST00000363474 103 ntBASIC2.91□□□□□ -1.94
SCN4AP35499 AC009302.1-201ENST00000417147 390 ntBASIC2.91□□□□□ -1.94
SCN4AP35499 FAM204CP-201ENST00000424489 642 ntBASIC2.91□□□□□ -1.94
SCN4AP35499 AL592045.1-201ENST00000429867 352 ntBASIC2.91□□□□□ -1.94
SCN4AP35499 AL592437.1-201ENST00000443781 492 ntBASIC2.91□□□□□ -1.94
SCN4AP35499 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.91□□□□□ -1.94
SCN4AP35499 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.91□□□□□ -1.94
SCN4AP35499 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.91□□□□□ -1.94
SCN4AP35499 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC2.91□□□□□ -1.94
SCN4AP35499 RNU6-1308P-201ENST00000516817 103 ntBASIC2.91□□□□□ -1.94
SCN4AP35499 AC021269.2-201ENST00000532318 330 ntBASIC2.91□□□□□ -1.94
SCN4AP35499 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.91□□□□□ -1.94
SCN4AP35499 MTCYBP28-201ENST00000566728 1132 ntBASIC2.91□□□□□ -1.94
SCN4AP35499 AC233266.2-201ENST00000567067 528 ntBASIC2.91□□□□□ -1.94
SCN4AP35499 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
SCN4AP35499 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC2.91□□□□□ -1.94
SCN4AP35499 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.91□□□□□ -1.94
SCN4AP35499 AC091152.2-201ENST00000591628 2569 ntBASIC2.91□□□□□ -1.94
SCN4AP35499 AL445437.1-201ENST00000623157 3087 ntBASIC2.91□□□□□ -1.94
SCN4AP35499 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SCN4AP35499 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms