Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RFC4P35249 RNA5SP27-201ENST00000363839 119 ntBASIC3.55□□□□□ -1.84
RFC4P35249 MT-TC-201ENST00000387405 66 ntBASIC3.55□□□□□ -1.84
RFC4P35249 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RFC4P35249 RNA5SP21-201ENST00000410917 96 ntBASIC3.55□□□□□ -1.84
RFC4P35249 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.55□□□□□ -1.84
RFC4P35249 RPS7P13-201ENST00000413955 498 ntBASIC3.55□□□□□ -1.84
RFC4P35249 HMGB3P23-201ENST00000414981 585 ntBASIC3.55□□□□□ -1.84
RFC4P35249 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.55□□□□□ -1.84
RFC4P35249 AC004865.1-201ENST00000442276 1003 ntBASIC3.55□□□□□ -1.84
RFC4P35249 AC087879.1-201ENST00000474343 374 ntBASIC3.55□□□□□ -1.84
RFC4P35249 HSPE1P6-201ENST00000479457 291 ntBASIC3.55□□□□□ -1.84
RFC4P35249 RNA5SP468-201ENST00000516782 93 ntBASIC3.55□□□□□ -1.84
RFC4P35249 SNORA31.21-201ENST00000517180 77 ntBASIC3.55□□□□□ -1.84
RFC4P35249 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.55□□□□□ -1.84
RFC4P35249 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.55□□□□□ -1.84
RFC4P35249 AC004832.5-201ENST00000608677 401 ntBASIC3.55□□□□□ -1.84
RFC4P35249 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.55□□□□□ -1.84
RFC4P35249 AC018926.3-201ENST00000618841 406 ntBASIC3.55□□□□□ -1.84
RFC4P35249 AC006963.1-201ENST00000624003 1052 ntBASIC3.55□□□□□ -1.84
RFC4P35249 AL590396.2-201ENST00000636511 1041 ntBASIC3.55□□□□□ -1.84
RFC4P35249 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
RFC4P35249 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
RFC4P35249 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.54□□□□□ -1.84
RFC4P35249 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RFC4P35249 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.54□□□□□ -1.84
RFC4P35249 AC006960.1-201ENST00000419980 153 ntBASIC3.54□□□□□ -1.84
RFC4P35249 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.54□□□□□ -1.84
RFC4P35249 AC068135.1-201ENST00000446164 246 ntBASIC3.54□□□□□ -1.84
RFC4P35249 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.54□□□□□ -1.84
RFC4P35249 HMGB1P15-201ENST00000453854 435 ntBASIC3.54□□□□□ -1.84
RFC4P35249 AC006539.3-201ENST00000454258 129 ntBASIC3.54□□□□□ -1.84
RFC4P35249 RPS3P1-201ENST00000456781 192 ntBASIC3.54□□□□□ -1.84
RFC4P35249 AC117522.3-201ENST00000507974 584 ntBASIC3.54□□□□□ -1.84
RFC4P35249 MTND4LP22-201ENST00000508209 276 ntBASIC3.54□□□□□ -1.84
RFC4P35249 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.54□□□□□ -1.84
RFC4P35249 RNA5SP148-201ENST00000516527 94 ntBASIC3.54□□□□□ -1.84
RFC4P35249 AC083923.1-201ENST00000523708 376 ntBASIC3.54□□□□□ -1.84
RFC4P35249 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.54□□□□□ -1.84
RFC4P35249 AP001646.1-201ENST00000527936 915 ntBASIC3.54□□□□□ -1.84
RFC4P35249 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.54□□□□□ -1.84
RFC4P35249 OR4T1P-201ENST00000554933 911 ntBASIC3.54□□□□□ -1.84
RFC4P35249 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.54□□□□□ -1.84
RFC4P35249 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.54□□□□□ -1.84
RFC4P35249 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.54□□□□□ -1.84
RFC4P35249 BNIP3P10-201ENST00000605360 577 ntBASIC3.54□□□□□ -1.84
RFC4P35249 AL390240.1-201ENST00000612950 384 ntBASIC3.54□□□□□ -1.84
RFC4P35249 AC097460.3-201ENST00000623099 442 ntBASIC3.54□□□□□ -1.84
RFC4P35249 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.54□□□□□ -1.84
RFC4P35249 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.54□□□□□ -1.84
RFC4P35249 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RFC4P35249 AC004925.1-201ENST00000624256 2706 ntBASIC3.53□□□□□ -1.84
RFC4P35249 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RFC4P35249 MIR16-2-201ENST00000362117 81 ntBASIC3.53□□□□□ -1.84
RFC4P35249 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RFC4P35249 ATP5F1P6-201ENST00000402768 767 ntBASIC3.53□□□□□ -1.84
RFC4P35249 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.53□□□□□ -1.84
RFC4P35249 BMS1P22-201ENST00000414726 313 ntBASIC3.53□□□□□ -1.84
RFC4P35249 AL158050.1-201ENST00000416077 457 ntBASIC3.53□□□□□ -1.84
RFC4P35249 RPS7P2-201ENST00000435134 607 ntBASIC3.53□□□□□ -1.84
RFC4P35249 YWHAZP8-201ENST00000436935 731 ntBASIC3.53□□□□□ -1.84
RFC4P35249 HIGD1AP11-201ENST00000438361 280 ntBASIC3.53□□□□□ -1.84
RFC4P35249 AC010285.1-201ENST00000470580 392 ntBASIC3.53□□□□□ -1.84
RFC4P35249 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.53□□□□□ -1.84
RFC4P35249 CYCSP20-201ENST00000473154 315 ntBASIC3.53□□□□□ -1.84
RFC4P35249 RN7SL633P-201ENST00000488974 297 ntBASIC3.53□□□□□ -1.84
RFC4P35249 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.53□□□□□ -1.84
RFC4P35249 OR5H3P-201ENST00000502817 919 ntBASIC3.53□□□□□ -1.84
RFC4P35249 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.53□□□□□ -1.84
RFC4P35249 RNU6-237P-201ENST00000515985 71 ntBASIC3.53□□□□□ -1.84
RFC4P35249 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
RFC4P35249 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.53□□□□□ -1.84
RFC4P35249 AC104229.1-201ENST00000561364 255 ntBASIC3.53□□□□□ -1.84
RFC4P35249 SNORD53-201ENST00000579969 78 ntBASIC3.53□□□□□ -1.84
RFC4P35249 AP001029.3-201ENST00000588063 596 ntBASIC3.53□□□□□ -1.84
RFC4P35249 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.53□□□□□ -1.84
RFC4P35249 AL109653.1-201ENST00000603091 248 ntBASIC3.53□□□□□ -1.84
RFC4P35249 AC005776.1-201ENST00000603164 290 ntBASIC3.53□□□□□ -1.84
RFC4P35249 AC073569.3-201ENST00000619055 682 ntBASIC3.53□□□□□ -1.84
RFC4P35249 AC064859.1-201ENST00000624741 174 ntBASIC3.53□□□□□ -1.84
RFC4P35249 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.53□□□□□ -1.84
RFC4P35249 AC017104.5-201ENST00000637647 639 ntBASIC3.53□□□□□ -1.84
RFC4P35249 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.53□□□□□ -1.84
RFC4P35249 MAPK10-362ENST00000641864 4484 ntBASIC3.52□□□□□ -1.85
RFC4P35249 MTND4P8-201ENST00000514997 1362 ntBASIC3.52□□□□□ -1.85
RFC4P35249 ZNF542P-204ENST00000482727 1305 ntBASIC3.52□□□□□ -1.85
RFC4P35249 ENSAP3-201ENST00000312710 333 ntBASIC3.52□□□□□ -1.85
RFC4P35249 RNU6-481P-201ENST00000384194 107 ntBASIC3.52□□□□□ -1.85
RFC4P35249 SSXP10-201ENST00000402595 565 ntBASIC3.52□□□□□ -1.85
RFC4P35249 RNA5SP107-201ENST00000411358 122 ntBASIC3.52□□□□□ -1.85
RFC4P35249 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.52□□□□□ -1.85
RFC4P35249 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.52□□□□□ -1.85
RFC4P35249 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.52□□□□□ -1.85
RFC4P35249 RN7SL442P-201ENST00000473804 320 ntBASIC3.52□□□□□ -1.85
RFC4P35249 UBL5P3-201ENST00000475112 231 ntBASIC3.52□□□□□ -1.85
RFC4P35249 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.52□□□□□ -1.85
RFC4P35249 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.52□□□□□ -1.85
RFC4P35249 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.52□□□□□ -1.85
RFC4P35249 AC096725.1-201ENST00000514266 313 ntBASIC3.52□□□□□ -1.85
RFC4P35249 RNA5SP24-201ENST00000516478 95 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms