Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AL034418.1-201ENST00000448675 860 ntBASIC3.06□□□□□ -1.92
SHMT2P34897 TRBV26-201ENST00000456572 344 ntBASIC3.06□□□□□ -1.92
SHMT2P34897 MTCO3P2-201ENST00000457365 171 ntBASIC3.06□□□□□ -1.92
SHMT2P34897 RPS3AP43-201ENST00000479743 781 ntBASIC3.06□□□□□ -1.92
SHMT2P34897 DYNLL1P6-201ENST00000503440 264 ntBASIC3.06□□□□□ -1.92
SHMT2P34897 AC026427.2-201ENST00000506228 536 ntBASIC3.06□□□□□ -1.92
SHMT2P34897 SUMO2P5-201ENST00000506790 245 ntBASIC3.06□□□□□ -1.92
SHMT2P34897 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SHMT2P34897 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SHMT2P34897 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.06□□□□□ -1.92
SHMT2P34897 MTCYBP41-201ENST00000528913 1123 ntBASIC3.06□□□□□ -1.92
SHMT2P34897 AP003385.6-201ENST00000531603 374 ntBASIC3.06□□□□□ -1.92
SHMT2P34897 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.06□□□□□ -1.92
SHMT2P34897 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.06□□□□□ -1.92
SHMT2P34897 GAS5-AS1-201ENST00000602767 694 ntBASIC3.06□□□□□ -1.92
SHMT2P34897 IGHV3-29-201ENST00000604817 344 ntBASIC3.06□□□□□ -1.92
SHMT2P34897 AC016877.3-201ENST00000606778 504 ntBASIC3.06□□□□□ -1.92
SHMT2P34897 AC018645.2-201ENST00000609151 472 ntBASIC3.06□□□□□ -1.92
SHMT2P34897 AL591516.1-201ENST00000611326 274 ntBASIC3.06□□□□□ -1.92
SHMT2P34897 RNU6-1192P-201ENST00000612197 107 ntBASIC3.06□□□□□ -1.92
SHMT2P34897 AL592148.2-201ENST00000612210 372 ntBASIC3.06□□□□□ -1.92
SHMT2P34897 RNU6-489P-201ENST00000618289 107 ntBASIC3.06□□□□□ -1.92
SHMT2P34897 MIR8057-201ENST00000620957 69 ntBASIC3.06□□□□□ -1.92
SHMT2P34897 AC099506.2-201ENST00000623074 221 ntBASIC3.06□□□□□ -1.92
SHMT2P34897 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.06□□□□□ -1.92
SHMT2P34897 MIR622-201ENST00000638396 96 ntBASIC3.06□□□□□ -1.92
SHMT2P34897 AF117829.1-206ENST00000621883 3802 ntBASIC3.06□□□□□ -1.92
SHMT2P34897 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SHMT2P34897 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.05□□□□□ -1.92
SHMT2P34897 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.05□□□□□ -1.92
SHMT2P34897 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.05□□□□□ -1.92
SHMT2P34897 MTND4P34-201ENST00000572715 1371 ntBASIC3.05□□□□□ -1.92
SHMT2P34897 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
SHMT2P34897 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SHMT2P34897 ANKRD36P1-201ENST00000344424 659 ntBASIC3.05□□□□□ -1.92
SHMT2P34897 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
SHMT2P34897 RNU6-989P-201ENST00000362756 107 ntBASIC3.05□□□□□ -1.92
SHMT2P34897 SNORA7.2-201ENST00000364446 145 ntBASIC3.05□□□□□ -1.92
SHMT2P34897 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
SHMT2P34897 MIR491-201ENST00000384877 84 ntBASIC3.05□□□□□ -1.92
SHMT2P34897 MTCO1P56-201ENST00000401674 224 ntBASIC3.05□□□□□ -1.92
SHMT2P34897 AL079342.2-201ENST00000403367 482 ntBASIC3.05□□□□□ -1.92
SHMT2P34897 RPL23AP47-201ENST00000408017 460 ntBASIC3.05□□□□□ -1.92
SHMT2P34897 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.05□□□□□ -1.92
SHMT2P34897 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.05□□□□□ -1.92
SHMT2P34897 RPL32P35-201ENST00000415214 394 ntBASIC3.05□□□□□ -1.92
SHMT2P34897 BOLA3P4-201ENST00000418151 400 ntBASIC3.05□□□□□ -1.92
SHMT2P34897 SDCBPP3-201ENST00000419629 891 ntBASIC3.05□□□□□ -1.92
SHMT2P34897 RAC1P8-201ENST00000427086 527 ntBASIC3.05□□□□□ -1.92
SHMT2P34897 AL035410.1-201ENST00000427409 427 ntBASIC3.05□□□□□ -1.92
SHMT2P34897 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.05□□□□□ -1.92
SHMT2P34897 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.05□□□□□ -1.92
SHMT2P34897 RPL23AP16-201ENST00000441715 421 ntBASIC3.05□□□□□ -1.92
SHMT2P34897 MTCYBP42-201ENST00000444653 1130 ntBASIC3.05□□□□□ -1.92
SHMT2P34897 AC004022.1-201ENST00000447766 1066 ntBASIC3.05□□□□□ -1.92
SHMT2P34897 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.05□□□□□ -1.92
SHMT2P34897 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.05□□□□□ -1.92
SHMT2P34897 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.05□□□□□ -1.92
SHMT2P34897 AC091179.1-201ENST00000461606 579 ntBASIC3.05□□□□□ -1.92
SHMT2P34897 RPL21P8-201ENST00000465083 535 ntBASIC3.05□□□□□ -1.92
SHMT2P34897 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.05□□□□□ -1.92
SHMT2P34897 RN7SKP57-201ENST00000517248 293 ntBASIC3.05□□□□□ -1.92
SHMT2P34897 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.05□□□□□ -1.92
SHMT2P34897 ZNF705CP-201ENST00000530515 889 ntBASIC3.05□□□□□ -1.92
SHMT2P34897 AP001317.1-201ENST00000531194 960 ntBASIC3.05□□□□□ -1.92
SHMT2P34897 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.05□□□□□ -1.92
SHMT2P34897 AC010198.2-201ENST00000550612 259 ntBASIC3.05□□□□□ -1.92
SHMT2P34897 LSM6P2-201ENST00000552208 177 ntBASIC3.05□□□□□ -1.92
SHMT2P34897 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.05□□□□□ -1.92
SHMT2P34897 SULT1C2P1-202ENST00000562418 459 ntBASIC3.05□□□□□ -1.92
SHMT2P34897 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.05□□□□□ -1.92
SHMT2P34897 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.05□□□□□ -1.92
SHMT2P34897 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.05□□□□□ -1.92
SHMT2P34897 AL161756.2-201ENST00000604597 246 ntBASIC3.05□□□□□ -1.92
SHMT2P34897 AC005014.3-201ENST00000605985 190 ntBASIC3.05□□□□□ -1.92
SHMT2P34897 AL451074.6-201ENST00000608512 729 ntBASIC3.05□□□□□ -1.92
SHMT2P34897 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
SHMT2P34897 AC109454.4-201ENST00000623411 649 ntBASIC3.05□□□□□ -1.92
SHMT2P34897 AC026422.1-201ENST00000623961 452 ntBASIC3.05□□□□□ -1.92
SHMT2P34897 AC026634.1-201ENST00000634369 198 ntBASIC3.05□□□□□ -1.92
SHMT2P34897 AC087821.2-201ENST00000637086 450 ntBASIC3.05□□□□□ -1.92
SHMT2P34897 FAM35CP-201ENST00000554755 2470 ntBASIC3.05□□□□□ -1.92
SHMT2P34897 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.05□□□□□ -1.92
SHMT2P34897 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.05□□□□□ -1.92
SHMT2P34897 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SHMT2P34897 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SHMT2P34897 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SHMT2P34897 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SHMT2P34897 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.04□□□□□ -1.92
SHMT2P34897 SNORA51.2-201ENST00000364595 132 ntBASIC3.04□□□□□ -1.92
SHMT2P34897 RNU6-761P-201ENST00000384148 107 ntBASIC3.04□□□□□ -1.92
SHMT2P34897 SNORD15B-201ENST00000384714 146 ntBASIC3.04□□□□□ -1.92
SHMT2P34897 SNORA46-201ENST00000384762 135 ntBASIC3.04□□□□□ -1.92
SHMT2P34897 RNU6-1000P-201ENST00000391066 106 ntBASIC3.04□□□□□ -1.92
SHMT2P34897 AL355143.1-201ENST00000407101 841 ntBASIC3.04□□□□□ -1.92
SHMT2P34897 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.04□□□□□ -1.92
SHMT2P34897 MTND2P16-201ENST00000419987 799 ntBASIC3.04□□□□□ -1.92
SHMT2P34897 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.04□□□□□ -1.92
SHMT2P34897 RPL21P112-201ENST00000434403 463 ntBASIC3.04□□□□□ -1.92
SHMT2P34897 RPL23AP83-201ENST00000434984 473 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms