Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 RN7SKP126-201ENST00000411143 300 ntBASIC4.9□□□□□ -1.63
VAMP1P23763 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.9□□□□□ -1.63
VAMP1P23763 VN1R36P-201ENST00000414936 291 ntBASIC4.9□□□□□ -1.63
VAMP1P23763 PTPN2P1-201ENST00000423212 1072 ntBASIC4.9□□□□□ -1.63
VAMP1P23763 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.9□□□□□ -1.63
VAMP1P23763 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.9□□□□□ -1.63
VAMP1P23763 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.9□□□□□ -1.63
VAMP1P23763 AC236972.2-201ENST00000434979 310 ntBASIC4.9□□□□□ -1.63
VAMP1P23763 AL645939.3-201ENST00000435408 225 ntBASIC4.9□□□□□ -1.63
VAMP1P23763 PTMAP6-201ENST00000439110 327 ntBASIC4.9□□□□□ -1.63
VAMP1P23763 AL356535.1-201ENST00000440335 398 ntBASIC4.9□□□□□ -1.63
VAMP1P23763 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC4.9□□□□□ -1.63
VAMP1P23763 AC084357.1-201ENST00000473404 255 ntBASIC4.9□□□□□ -1.63
VAMP1P23763 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC4.9□□□□□ -1.63
VAMP1P23763 RN7SL413P-201ENST00000482700 297 ntBASIC4.9□□□□□ -1.63
VAMP1P23763 AC083795.1-201ENST00000491760 320 ntBASIC4.9□□□□□ -1.63
VAMP1P23763 MTND3P25-201ENST00000509243 135 ntBASIC4.9□□□□□ -1.63
VAMP1P23763 MIR2117-201ENST00000516780 80 ntBASIC4.9□□□□□ -1.63
VAMP1P23763 AC087854.1-201ENST00000519706 414 ntBASIC4.9□□□□□ -1.63
VAMP1P23763 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC4.9□□□□□ -1.63
VAMP1P23763 AP004609.2-201ENST00000532177 190 ntBASIC4.9□□□□□ -1.63
VAMP1P23763 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.9□□□□□ -1.63
VAMP1P23763 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.9□□□□□ -1.63
VAMP1P23763 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.9□□□□□ -1.63
VAMP1P23763 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.9□□□□□ -1.63
VAMP1P23763 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.9□□□□□ -1.63
VAMP1P23763 MIR4719-201ENST00000585233 84 ntBASIC4.9□□□□□ -1.63
VAMP1P23763 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC4.9□□□□□ -1.63
VAMP1P23763 NUTF2P8-201ENST00000604593 363 ntBASIC4.9□□□□□ -1.63
VAMP1P23763 AL031601.2-202ENST00000622650 282 ntBASIC4.9□□□□□ -1.63
VAMP1P23763 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC4.9□□□□□ -1.63
VAMP1P23763 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC4.9□□□□□ -1.63
VAMP1P23763 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
VAMP1P23763 MAPK10-349ENST00000641767 3661 ntBASIC4.9□□□□□ -1.63
VAMP1P23763 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
VAMP1P23763 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VAMP1P23763 NCAPGP1-201ENST00000505112 1814 ntBASIC4.9□□□□□ -1.63
VAMP1P23763 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
VAMP1P23763 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VAMP1P23763 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
VAMP1P23763 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VAMP1P23763 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC4.89□□□□□ -1.63
VAMP1P23763 AL138820.1-201ENST00000617901 5305 ntBASIC4.89□□□□□ -1.63
VAMP1P23763 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VAMP1P23763 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.89□□□□□ -1.63
VAMP1P23763 RNA5SP308-201ENST00000362532 115 ntBASIC4.89□□□□□ -1.63
VAMP1P23763 Y_RNA.67-201ENST00000362870 100 ntBASIC4.89□□□□□ -1.63
VAMP1P23763 CRP-204ENST00000368112 787 ntTSL 2 BASIC4.89□□□□□ -1.63
VAMP1P23763 RNU6-214P-201ENST00000384130 107 ntBASIC4.89□□□□□ -1.63
VAMP1P23763 Y_RNA.535-201ENST00000384612 99 ntBASIC4.89□□□□□ -1.63
VAMP1P23763 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
VAMP1P23763 RNA5SP91-201ENST00000390902 119 ntBASIC4.89□□□□□ -1.63
VAMP1P23763 RNA5SP156-201ENST00000410250 110 ntBASIC4.89□□□□□ -1.63
VAMP1P23763 RN7SKP53-201ENST00000411337 315 ntBASIC4.89□□□□□ -1.63
VAMP1P23763 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.89□□□□□ -1.63
VAMP1P23763 RPL21P50-201ENST00000417698 477 ntBASIC4.89□□□□□ -1.63
VAMP1P23763 YPEL5P1-201ENST00000419731 367 ntBASIC4.89□□□□□ -1.63
VAMP1P23763 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.89□□□□□ -1.63
VAMP1P23763 AC099677.3-201ENST00000427081 395 ntBASIC4.89□□□□□ -1.63
VAMP1P23763 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC4.89□□□□□ -1.63
VAMP1P23763 AC096775.1-201ENST00000437724 448 ntBASIC4.89□□□□□ -1.63
VAMP1P23763 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.89□□□□□ -1.63
VAMP1P23763 AC019185.1-201ENST00000442718 389 ntBASIC4.89□□□□□ -1.63
VAMP1P23763 POU5F1P5-201ENST00000445059 658 ntBASIC4.89□□□□□ -1.63
VAMP1P23763 AC016027.4-201ENST00000450866 277 ntBASIC4.89□□□□□ -1.63
VAMP1P23763 FABP5P15-201ENST00000453566 214 ntBASIC4.89□□□□□ -1.63
VAMP1P23763 AC079168.1-201ENST00000458741 345 ntBASIC4.89□□□□□ -1.63
VAMP1P23763 AC091180.1-201ENST00000462104 372 ntBASIC4.89□□□□□ -1.63
VAMP1P23763 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
VAMP1P23763 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.89□□□□□ -1.63
VAMP1P23763 AC006539.1-201ENST00000481419 501 ntBASIC4.89□□□□□ -1.63
VAMP1P23763 RN7SL741P-201ENST00000482473 289 ntBASIC4.89□□□□□ -1.63
VAMP1P23763 AC009120.1-201ENST00000493458 473 ntBASIC4.89□□□□□ -1.63
VAMP1P23763 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC4.89□□□□□ -1.63
VAMP1P23763 KHDC1P1-201ENST00000511053 508 ntBASIC4.89□□□□□ -1.63
VAMP1P23763 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VAMP1P23763 RN7SKP13-201ENST00000515933 244 ntBASIC4.89□□□□□ -1.63
VAMP1P23763 RNU6-1332P-201ENST00000516666 104 ntBASIC4.89□□□□□ -1.63
VAMP1P23763 RNA5SP230-201ENST00000517039 122 ntBASIC4.89□□□□□ -1.63
VAMP1P23763 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
VAMP1P23763 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.89□□□□□ -1.63
VAMP1P23763 AC008055.1-201ENST00000547032 609 ntBASIC4.89□□□□□ -1.63
VAMP1P23763 MYL6-213ENST00000549017 502 ntTSL 3 BASIC4.89□□□□□ -1.63
VAMP1P23763 AL110118.1-201ENST00000553543 400 ntBASIC4.89□□□□□ -1.63
VAMP1P23763 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC4.89□□□□□ -1.63
VAMP1P23763 AC138761.3-201ENST00000579993 334 ntBASIC4.89□□□□□ -1.63
VAMP1P23763 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.89□□□□□ -1.63
VAMP1P23763 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC4.89□□□□□ -1.63
VAMP1P23763 AC113139.1-201ENST00000605049 239 ntBASIC4.89□□□□□ -1.63
VAMP1P23763 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC4.89□□□□□ -1.63
VAMP1P23763 AC002044.1-201ENST00000606707 158 ntBASIC4.89□□□□□ -1.63
VAMP1P23763 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.89□□□□□ -1.63
VAMP1P23763 CR381572.2-201ENST00000624852 397 ntBASIC4.89□□□□□ -1.63
VAMP1P23763 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.89□□□□□ -1.63
VAMP1P23763 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.89□□□□□ -1.63
VAMP1P23763 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VAMP1P23763 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VAMP1P23763 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VAMP1P23763 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
VAMP1P23763 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 154.9 ms