Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 AL158147.1-201ENST00000443970 75 ntBASIC7.27□□□□□ -1.25
CD44P16070 HMGN2P32-201ENST00000444648 269 ntBASIC7.27□□□□□ -1.25
CD44P16070 AL121578.2-201ENST00000448797 447 ntBASIC7.27□□□□□ -1.25
CD44P16070 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC7.27□□□□□ -1.25
CD44P16070 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC7.27□□□□□ -1.25
CD44P16070 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC7.27□□□□□ -1.25
CD44P16070 AC073916.1-201ENST00000545095 130 ntBASIC7.27□□□□□ -1.25
CD44P16070 AC026826.3-201ENST00000561747 158 ntBASIC7.27□□□□□ -1.25
CD44P16070 AC015819.1-201ENST00000613588 663 ntBASIC7.27□□□□□ -1.25
CD44P16070 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
CD44P16070 AL442128.1-201ENST00000615151 90 ntBASIC7.27□□□□□ -1.25
CD44P16070 AC006453.3-201ENST00000635891 377 ntBASIC7.27□□□□□ -1.25
CD44P16070 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC7.27□□□□□ -1.25
CD44P16070 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC7.27□□□□□ -1.25
CD44P16070 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CD44P16070 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CD44P16070 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.27□□□□□ -1.25
CD44P16070 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CD44P16070 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CD44P16070 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
CD44P16070 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC7.27□□□□□ -1.25
CD44P16070 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CD44P16070 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
CD44P16070 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
CD44P16070 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CD44P16070 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CD44P16070 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC7.26□□□□□ -1.25
CD44P16070 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CD44P16070 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CD44P16070 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CD44P16070 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
CD44P16070 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CD44P16070 RNU6-766P-201ENST00000362478 107 ntBASIC7.26□□□□□ -1.25
CD44P16070 RNA5SP321-201ENST00000362722 111 ntBASIC7.26□□□□□ -1.25
CD44P16070 SNORA38B-201ENST00000363524 131 ntBASIC7.26□□□□□ -1.25
CD44P16070 RNU6-643P-201ENST00000384018 107 ntBASIC7.26□□□□□ -1.25
CD44P16070 MIR450A2-201ENST00000385022 100 ntBASIC7.26□□□□□ -1.25
CD44P16070 RNA5SP115-201ENST00000411160 107 ntBASIC7.26□□□□□ -1.25
CD44P16070 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC7.26□□□□□ -1.25
CD44P16070 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC7.26□□□□□ -1.25
CD44P16070 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC7.26□□□□□ -1.25
CD44P16070 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC7.26□□□□□ -1.25
CD44P16070 PPIAP7-201ENST00000454070 489 ntBASIC7.26□□□□□ -1.25
CD44P16070 AC053481.1-201ENST00000467217 306 ntBASIC7.26□□□□□ -1.25
CD44P16070 AL390198.2-201ENST00000510553 222 ntBASIC7.26□□□□□ -1.25
CD44P16070 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC7.26□□□□□ -1.25
CD44P16070 RNA5SP395-201ENST00000516567 118 ntBASIC7.26□□□□□ -1.25
CD44P16070 RNA5SP165-201ENST00000517142 115 ntBASIC7.26□□□□□ -1.25
CD44P16070 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC7.26□□□□□ -1.25
CD44P16070 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC7.26□□□□□ -1.25
CD44P16070 MIR378H-201ENST00000579966 83 ntBASIC7.26□□□□□ -1.25
CD44P16070 AC023575.1-201ENST00000580510 358 ntBASIC7.26□□□□□ -1.25
CD44P16070 AC091133.5-201ENST00000603088 301 ntBASIC7.26□□□□□ -1.25
CD44P16070 AC103564.3-201ENST00000621194 220 ntBASIC7.26□□□□□ -1.25
CD44P16070 MRPL57P1-201ENST00000621486 265 ntBASIC7.26□□□□□ -1.25
CD44P16070 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC7.26□□□□□ -1.25
CD44P16070 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CD44P16070 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC7.26□□□□□ -1.25
CD44P16070 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC7.26□□□□□ -1.25
CD44P16070 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CD44P16070 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CD44P16070 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
CD44P16070 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CD44P16070 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC7.25□□□□□ -1.25
CD44P16070 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC7.25□□□□□ -1.25
CD44P16070 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CD44P16070 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC7.25□□□□□ -1.25
CD44P16070 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CD44P16070 AC007529.1-201ENST00000418574 2178 ntBASIC7.25□□□□□ -1.25
CD44P16070 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
CD44P16070 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CD44P16070 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CD44P16070 RNU6-541P-201ENST00000384709 110 ntBASIC7.25□□□□□ -1.25
CD44P16070 UBA52P6-201ENST00000399822 382 ntBASIC7.25□□□□□ -1.25
CD44P16070 RN7SKP117-201ENST00000410175 264 ntBASIC7.25□□□□□ -1.25
CD44P16070 RN7SKP216-201ENST00000411050 312 ntBASIC7.25□□□□□ -1.25
CD44P16070 MAP1LC3BP1-201ENST00000417653 379 ntBASIC7.25□□□□□ -1.25
CD44P16070 RPL7AP14-201ENST00000424041 802 ntBASIC7.25□□□□□ -1.25
CD44P16070 TRBV29OR9-2-201ENST00000427589 333 ntBASIC7.25□□□□□ -1.25
CD44P16070 HSPE1P21-201ENST00000438283 308 ntBASIC7.25□□□□□ -1.25
CD44P16070 RPL5P7-201ENST00000444235 813 ntBASIC7.25□□□□□ -1.25
CD44P16070 AC096638.1-201ENST00000444678 216 ntBASIC7.25□□□□□ -1.25
CD44P16070 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC7.25□□□□□ -1.25
CD44P16070 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC7.25□□□□□ -1.25
CD44P16070 RN7SL849P-201ENST00000485236 295 ntBASIC7.25□□□□□ -1.25
CD44P16070 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC7.25□□□□□ -1.25
CD44P16070 RNU6ATAC17P-201ENST00000516074 71 ntBASIC7.25□□□□□ -1.25
CD44P16070 AP004607.5-201ENST00000532034 217 ntBASIC7.25□□□□□ -1.25
CD44P16070 GNG2-203ENST00000553432 577 ntTSL 4 BASIC7.25□□□□□ -1.25
CD44P16070 RN7SL689P-201ENST00000577215 297 ntBASIC7.25□□□□□ -1.25
CD44P16070 SNORD96A-201ENST00000606577 79 ntBASIC7.25□□□□□ -1.25
CD44P16070 AC116165.3-201ENST00000614524 400 ntBASIC7.25□□□□□ -1.25
CD44P16070 MIR6736-201ENST00000616799 59 ntBASIC7.25□□□□□ -1.25
CD44P16070 SCARNA4-201ENST00000629045 128 ntBASIC7.25□□□□□ -1.25
CD44P16070 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CD44P16070 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
CD44P16070 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CD44P16070 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
CD44P16070 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC7.25□□□□□ -1.25
CD44P16070 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms