Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.5□□□□□ -1.85
CFTRP13569 AL845331.3-202ENST00000562856 261 ntBASIC3.5□□□□□ -1.85
CFTRP13569 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.5□□□□□ -1.85
CFTRP13569 AC091834.1-201ENST00000614543 472 ntBASIC3.5□□□□□ -1.85
CFTRP13569 AC091953.2-201ENST00000623979 160 ntBASIC3.5□□□□□ -1.85
CFTRP13569 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CFTRP13569 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.49□□□□□ -1.85
CFTRP13569 U8.10-201ENST00000384260 133 ntBASIC3.49□□□□□ -1.85
CFTRP13569 RPL36AP6-201ENST00000435770 321 ntBASIC3.49□□□□□ -1.85
CFTRP13569 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.49□□□□□ -1.85
CFTRP13569 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CFTRP13569 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.49□□□□□ -1.85
CFTRP13569 GAPDHP27-201ENST00000447427 1020 ntBASIC3.49□□□□□ -1.85
CFTRP13569 MIR5002-201ENST00000584713 97 ntBASIC3.49□□□□□ -1.85
CFTRP13569 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.49□□□□□ -1.85
CFTRP13569 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CFTRP13569 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CFTRP13569 AL133412.1-201ENST00000380194 2992 ntBASIC3.49□□□□□ -1.85
CFTRP13569 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.49□□□□□ -1.85
CFTRP13569 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.48□□□□□ -1.85
CFTRP13569 RNU1-51P-201ENST00000365345 176 ntBASIC3.48□□□□□ -1.85
CFTRP13569 NDUFB4P5-201ENST00000415445 361 ntBASIC3.48□□□□□ -1.85
CFTRP13569 AC008173.1-201ENST00000418901 264 ntBASIC3.48□□□□□ -1.85
CFTRP13569 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.48□□□□□ -1.85
CFTRP13569 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.48□□□□□ -1.85
CFTRP13569 AC126177.3-201ENST00000551839 688 ntBASIC3.48□□□□□ -1.85
CFTRP13569 CBX3P5-201ENST00000552017 521 ntBASIC3.48□□□□□ -1.85
CFTRP13569 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.48□□□□□ -1.85
CFTRP13569 AC023043.3-201ENST00000593113 385 ntBASIC3.48□□□□□ -1.85
CFTRP13569 Y_RNA.783-201ENST00000613546 102 ntBASIC3.48□□□□□ -1.85
CFTRP13569 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.48□□□□□ -1.85
CFTRP13569 AC132825.8-201ENST00000640783 297 ntBASIC3.48□□□□□ -1.85
CFTRP13569 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.48□□□□□ -1.85
CFTRP13569 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CFTRP13569 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.48□□□□□ -1.85
CFTRP13569 MIR9-3-201ENST00000385084 90 ntBASIC3.47□□□□□ -1.85
CFTRP13569 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.47□□□□□ -1.85
CFTRP13569 RPL36AP21-201ENST00000490372 323 ntBASIC3.47□□□□□ -1.85
CFTRP13569 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.47□□□□□ -1.85
CFTRP13569 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CFTRP13569 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
CFTRP13569 AC245100.2-201ENST00000454544 1679 ntBASIC3.47□□□□□ -1.85
CFTRP13569 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CFTRP13569 AC093151.1-201ENST00000427711 313 ntBASIC3.47□□□□□ -1.85
CFTRP13569 SDR42E1P3-201ENST00000438345 502 ntBASIC3.47□□□□□ -1.85
CFTRP13569 AC003989.2-201ENST00000440224 169 ntBASIC3.47□□□□□ -1.85
CFTRP13569 CEACAMP4-201ENST00000457676 421 ntBASIC3.47□□□□□ -1.85
CFTRP13569 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.47□□□□□ -1.85
CFTRP13569 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.47□□□□□ -1.85
CFTRP13569 MIR378A-201ENST00000362177 66 ntBASIC3.46□□□□□ -1.86
CFTRP13569 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CFTRP13569 RNA5SP270-201ENST00000411361 118 ntBASIC3.46□□□□□ -1.86
CFTRP13569 SNRPFP2-201ENST00000440710 251 ntBASIC3.46□□□□□ -1.86
CFTRP13569 AC092185.1-201ENST00000491371 97 ntBASIC3.46□□□□□ -1.86
CFTRP13569 snoZ278.1-201ENST00000517059 112 ntBASIC3.46□□□□□ -1.86
CFTRP13569 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.46□□□□□ -1.86
CFTRP13569 AL389895.1-201ENST00000554127 252 ntBASIC3.46□□□□□ -1.86
CFTRP13569 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC3.46□□□□□ -1.86
CFTRP13569 LRRC37A5P-203ENST00000580181 585 ntBASIC3.46□□□□□ -1.86
CFTRP13569 AL359821.1-201ENST00000605519 182 ntBASIC3.46□□□□□ -1.86
CFTRP13569 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
CFTRP13569 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.46□□□□□ -1.86
CFTRP13569 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CFTRP13569 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.45□□□□□ -1.86
CFTRP13569 AL359715.4-201ENST00000606629 1436 ntBASIC3.45□□□□□ -1.86
CFTRP13569 MIR365B-201ENST00000362317 111 ntBASIC3.45□□□□□ -1.86
CFTRP13569 RNU6-178P-201ENST00000384631 104 ntBASIC3.45□□□□□ -1.86
CFTRP13569 AC091179.1-201ENST00000461606 579 ntBASIC3.45□□□□□ -1.86
CFTRP13569 AC098583.1-201ENST00000480875 255 ntBASIC3.45□□□□□ -1.86
CFTRP13569 HMGB1P1-201ENST00000522557 636 ntBASIC3.45□□□□□ -1.86
CFTRP13569 AC008083.2-201ENST00000546707 476 ntBASIC3.45□□□□□ -1.86
CFTRP13569 AC092650.2-201ENST00000619984 902 ntBASIC3.45□□□□□ -1.86
CFTRP13569 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.44□□□□□ -1.86
CFTRP13569 BX005019.1-201ENST00000561881 1810 ntBASIC3.44□□□□□ -1.86
CFTRP13569 RNY1P10-201ENST00000363268 113 ntBASIC3.44□□□□□ -1.86
CFTRP13569 RPL23AP76-201ENST00000441860 458 ntBASIC3.44□□□□□ -1.86
CFTRP13569 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.44□□□□□ -1.86
CFTRP13569 RNA5SP445-201ENST00000515889 115 ntBASIC3.44□□□□□ -1.86
CFTRP13569 OR1S1-201ENST00000624470 978 ntBASIC3.44□□□□□ -1.86
CFTRP13569 NR1H5P-201ENST00000452683 1377 ntBASIC3.44□□□□□ -1.86
CFTRP13569 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CFTRP13569 RNA5SP190-201ENST00000365222 118 ntBASIC3.43□□□□□ -1.86
CFTRP13569 AC106901.1-201ENST00000425086 698 ntBASIC3.43□□□□□ -1.86
CFTRP13569 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.43□□□□□ -1.86
CFTRP13569 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.43□□□□□ -1.86
CFTRP13569 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.43□□□□□ -1.86
CFTRP13569 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.43□□□□□ -1.86
CFTRP13569 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.43□□□□□ -1.86
CFTRP13569 MTCO3P31-201ENST00000405526 789 ntBASIC3.42□□□□□ -1.86
CFTRP13569 BTF3P4-201ENST00000418852 495 ntBASIC3.42□□□□□ -1.86
CFTRP13569 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.42□□□□□ -1.86
CFTRP13569 SNORA70.14-201ENST00000516205 110 ntBASIC3.42□□□□□ -1.86
CFTRP13569 AC025260.1-201ENST00000548858 430 ntBASIC3.42□□□□□ -1.86
CFTRP13569 AC060766.3-201ENST00000591442 263 ntBASIC3.42□□□□□ -1.86
CFTRP13569 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.42□□□□□ -1.86
CFTRP13569 AC244517.12-201ENST00000623581 663 ntBASIC3.42□□□□□ -1.86
CFTRP13569 AL512643.1-201ENST00000635735 524 ntBASIC3.42□□□□□ -1.86
CFTRP13569 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
CFTRP13569 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CFTRP13569 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms