Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH1P12830 RN7SL703P-201ENST00000578485 302 ntBASIC3.72□□□□□ -1.81
CDH1P12830 MIR4286-201ENST00000580651 93 ntBASIC3.72□□□□□ -1.81
CDH1P12830 AC053481.4-201ENST00000583164 216 ntBASIC3.72□□□□□ -1.81
CDH1P12830 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.72□□□□□ -1.81
CDH1P12830 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH1P12830 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.72□□□□□ -1.81
CDH1P12830 AC078795.2-201ENST00000602835 1252 ntBASIC3.72□□□□□ -1.81
CDH1P12830 BNIP3P11-201ENST00000603878 563 ntBASIC3.72□□□□□ -1.81
CDH1P12830 AC010857.1-201ENST00000606398 594 ntBASIC3.72□□□□□ -1.81
CDH1P12830 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.72□□□□□ -1.81
CDH1P12830 AC010678.1-201ENST00000614118 713 ntBASIC3.72□□□□□ -1.81
CDH1P12830 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.72□□□□□ -1.81
CDH1P12830 AC091905.1-201ENST00000624400 311 ntBASIC3.72□□□□□ -1.81
CDH1P12830 U6.101-201ENST00000637707 76 ntBASIC3.72□□□□□ -1.81
CDH1P12830 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CDH1P12830 PRO1804-201ENST00000623780 2050 ntBASIC3.72□□□□□ -1.81
CDH1P12830 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
CDH1P12830 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDH1P12830 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDH1P12830 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CDH1P12830 EXOC5P1-201ENST00000510543 1969 ntBASIC3.71□□□□□ -1.82
CDH1P12830 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CDH1P12830 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CDH1P12830 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CDH1P12830 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CDH1P12830 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
CDH1P12830 RNU4-91P-201ENST00000364778 135 ntBASIC3.71□□□□□ -1.82
CDH1P12830 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.71□□□□□ -1.82
CDH1P12830 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.71□□□□□ -1.82
CDH1P12830 RNU6-213P-201ENST00000384051 104 ntBASIC3.71□□□□□ -1.82
CDH1P12830 MIR199A2-201ENST00000385289 110 ntBASIC3.71□□□□□ -1.82
CDH1P12830 AC016769.3-201ENST00000396562 315 ntBASIC3.71□□□□□ -1.82
CDH1P12830 DEFB108C-201ENST00000400154 252 ntBASIC3.71□□□□□ -1.82
CDH1P12830 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.71□□□□□ -1.82
CDH1P12830 RN7SKP263-201ENST00000411194 309 ntBASIC3.71□□□□□ -1.82
CDH1P12830 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.71□□□□□ -1.82
CDH1P12830 CDK8P2-201ENST00000415020 547 ntBASIC3.71□□□□□ -1.82
CDH1P12830 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH1P12830 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CDH1P12830 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH1P12830 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.71□□□□□ -1.82
CDH1P12830 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.71□□□□□ -1.82
CDH1P12830 SKP1P1-201ENST00000438081 489 ntBASIC3.71□□□□□ -1.82
CDH1P12830 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH1P12830 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.71□□□□□ -1.82
CDH1P12830 RNA5SP269-201ENST00000459032 137 ntBASIC3.71□□□□□ -1.82
CDH1P12830 AC091564.1-201ENST00000464563 479 ntBASIC3.71□□□□□ -1.82
CDH1P12830 AC007537.2-201ENST00000472093 511 ntBASIC3.71□□□□□ -1.82
CDH1P12830 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CDH1P12830 AC093267.1-201ENST00000489176 961 ntBASIC3.71□□□□□ -1.82
CDH1P12830 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.71□□□□□ -1.82
CDH1P12830 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.71□□□□□ -1.82
CDH1P12830 SNORD116-26-201ENST00000516006 96 ntBASIC3.71□□□□□ -1.82
CDH1P12830 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH1P12830 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH1P12830 AC022695.1-201ENST00000522089 237 ntBASIC3.71□□□□□ -1.82
CDH1P12830 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH1P12830 AC022880.1-201ENST00000534017 973 ntBASIC3.71□□□□□ -1.82
CDH1P12830 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH1P12830 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH1P12830 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.71□□□□□ -1.82
CDH1P12830 AC090877.1-201ENST00000561418 344 ntBASIC3.71□□□□□ -1.82
CDH1P12830 MIR3160-1-201ENST00000577972 85 ntBASIC3.71□□□□□ -1.82
CDH1P12830 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.71□□□□□ -1.82
CDH1P12830 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.71□□□□□ -1.82
CDH1P12830 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.71□□□□□ -1.82
CDH1P12830 AC012065.4-201ENST00000602445 679 ntBASIC3.71□□□□□ -1.82
CDH1P12830 AC068790.6-201ENST00000602558 258 ntBASIC3.71□□□□□ -1.82
CDH1P12830 BRDTP1-201ENST00000605735 677 ntBASIC3.71□□□□□ -1.82
CDH1P12830 AC068276.1-201ENST00000605793 379 ntBASIC3.71□□□□□ -1.82
CDH1P12830 AC100793.4-201ENST00000613683 429 ntBASIC3.71□□□□□ -1.82
CDH1P12830 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CDH1P12830 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CDH1P12830 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH1P12830 AL713922.2-201ENST00000619384 716 ntBASIC3.71□□□□□ -1.82
CDH1P12830 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.71□□□□□ -1.82
CDH1P12830 FP236240.3-201ENST00000623061 327 ntBASIC3.71□□□□□ -1.82
CDH1P12830 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.71□□□□□ -1.82
CDH1P12830 AC025048.6-202ENST00000627667 438 ntBASIC3.71□□□□□ -1.82
CDH1P12830 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.71□□□□□ -1.82
CDH1P12830 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CDH1P12830 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
CDH1P12830 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.71□□□□□ -1.82
CDH1P12830 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CDH1P12830 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CDH1P12830 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDH1P12830 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDH1P12830 AC006504.1-201ENST00000562493 3666 ntBASIC3.7□□□□□ -1.82
CDH1P12830 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDH1P12830 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDH1P12830 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDH1P12830 Y_RNA.97-201ENST00000363094 102 ntBASIC3.7□□□□□ -1.82
CDH1P12830 RNU6-777P-201ENST00000364265 104 ntBASIC3.7□□□□□ -1.82
CDH1P12830 RNA5SP479-201ENST00000364858 117 ntBASIC3.7□□□□□ -1.82
CDH1P12830 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CDH1P12830 RNY3P10-201ENST00000384764 102 ntBASIC3.7□□□□□ -1.82
CDH1P12830 DHFRP6-201ENST00000401776 268 ntBASIC3.7□□□□□ -1.82
CDH1P12830 AC069218.2-201ENST00000411665 344 ntBASIC3.7□□□□□ -1.82
CDH1P12830 RPS7P13-201ENST00000413955 498 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms