Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
FREM3P0C091 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
FREM3P0C091 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC2.13□□□□□ -2.07
FREM3P0C091 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC2.13□□□□□ -2.07
FREM3P0C091 RNU1-51P-201ENST00000365345 176 ntBASIC2.13□□□□□ -2.07
FREM3P0C091 MIR504-201ENST00000385065 83 ntBASIC2.13□□□□□ -2.07
FREM3P0C091 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.13□□□□□ -2.07
FREM3P0C091 AP000567.1-201ENST00000406413 156 ntBASIC2.13□□□□□ -2.07
FREM3P0C091 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.13□□□□□ -2.07
FREM3P0C091 AC023347.2-201ENST00000433994 462 ntBASIC2.13□□□□□ -2.07
FREM3P0C091 ELOCP11-201ENST00000436690 332 ntBASIC2.13□□□□□ -2.07
FREM3P0C091 AL031663.1-201ENST00000437445 219 ntBASIC2.13□□□□□ -2.07
FREM3P0C091 ELOCP16-201ENST00000444494 332 ntBASIC2.13□□□□□ -2.07
FREM3P0C091 ARL5AP2-201ENST00000444698 533 ntBASIC2.13□□□□□ -2.07
FREM3P0C091 VN1R48P-201ENST00000448149 1036 ntBASIC2.13□□□□□ -2.07
FREM3P0C091 AC009961.3-201ENST00000449832 765 ntBASIC2.13□□□□□ -2.07
FREM3P0C091 C1DP3-201ENST00000455013 423 ntBASIC2.13□□□□□ -2.07
FREM3P0C091 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.13□□□□□ -2.07
FREM3P0C091 AC104687.1-201ENST00000485829 412 ntBASIC2.13□□□□□ -2.07
FREM3P0C091 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.13□□□□□ -2.07
FREM3P0C091 TMEM248P1-201ENST00000510579 951 ntBASIC2.13□□□□□ -2.07
FREM3P0C091 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.13□□□□□ -2.07
FREM3P0C091 AP001317.1-201ENST00000531194 960 ntBASIC2.13□□□□□ -2.07
FREM3P0C091 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.13□□□□□ -2.07
FREM3P0C091 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.13□□□□□ -2.07
FREM3P0C091 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.13□□□□□ -2.07
FREM3P0C091 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.13□□□□□ -2.07
FREM3P0C091 CENPUP2-201ENST00000555897 1186 ntBASIC2.13□□□□□ -2.07
FREM3P0C091 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.13□□□□□ -2.07
FREM3P0C091 AL645944.1-201ENST00000603857 493 ntBASIC2.13□□□□□ -2.07
FREM3P0C091 AC090525.3-201ENST00000605601 189 ntBASIC2.13□□□□□ -2.07
FREM3P0C091 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.13□□□□□ -2.07
FREM3P0C091 AC046143.2-201ENST00000609789 160 ntBASIC2.13□□□□□ -2.07
FREM3P0C091 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
FREM3P0C091 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
FREM3P0C091 ATP5F1P6-201ENST00000402768 767 ntBASIC2.12□□□□□ -2.07
FREM3P0C091 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.12□□□□□ -2.07
FREM3P0C091 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.12□□□□□ -2.07
FREM3P0C091 Z99127.2-201ENST00000441426 334 ntBASIC2.12□□□□□ -2.07
FREM3P0C091 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC2.12□□□□□ -2.07
FREM3P0C091 AC108120.2-201ENST00000512973 294 ntBASIC2.12□□□□□ -2.07
FREM3P0C091 RN7SKP244-201ENST00000516513 307 ntBASIC2.12□□□□□ -2.07
FREM3P0C091 RN7SKP282-201ENST00000516824 299 ntBASIC2.12□□□□□ -2.07
FREM3P0C091 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC2.12□□□□□ -2.07
FREM3P0C091 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC2.12□□□□□ -2.07
FREM3P0C091 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.12□□□□□ -2.07
FREM3P0C091 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.12□□□□□ -2.07
FREM3P0C091 AC011468.4-201ENST00000603942 409 ntBASIC2.12□□□□□ -2.07
FREM3P0C091 AP005212.4-201ENST00000614206 710 ntBASIC2.12□□□□□ -2.07
FREM3P0C091 AL162233.1-201ENST00000620014 944 ntBASIC2.12□□□□□ -2.07
FREM3P0C091 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.12□□□□□ -2.07
FREM3P0C091 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.12□□□□□ -2.07
FREM3P0C091 ZNF658B-202ENST00000615961 3375 ntBASIC2.12□□□□□ -2.07
FREM3P0C091 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.12□□□□□ -2.07
FREM3P0C091 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
FREM3P0C091 AC022031.1-201ENST00000585985 2593 ntBASIC2.12□□□□□ -2.07
FREM3P0C091 RNU6-666P-201ENST00000363499 107 ntBASIC2.12□□□□□ -2.07
FREM3P0C091 DNAJC19P6-201ENST00000401853 280 ntBASIC2.12□□□□□ -2.07
FREM3P0C091 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
FREM3P0C091 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.12□□□□□ -2.07
FREM3P0C091 HMGB1P45-201ENST00000435986 653 ntBASIC2.12□□□□□ -2.07
FREM3P0C091 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.12□□□□□ -2.07
FREM3P0C091 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.12□□□□□ -2.07
FREM3P0C091 RN7SKP277-201ENST00000516895 283 ntBASIC2.12□□□□□ -2.07
FREM3P0C091 RNA5SP402-201ENST00000517148 110 ntBASIC2.12□□□□□ -2.07
FREM3P0C091 OR4R2P-201ENST00000530815 597 ntBASIC2.12□□□□□ -2.07
FREM3P0C091 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.12□□□□□ -2.07
FREM3P0C091 AC016877.3-201ENST00000606778 504 ntBASIC2.12□□□□□ -2.07
FREM3P0C091 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.12□□□□□ -2.07
FREM3P0C091 AC006023.2-201ENST00000609916 167 ntBASIC2.12□□□□□ -2.07
FREM3P0C091 MIR6873-201ENST00000622788 63 ntBASIC2.12□□□□□ -2.07
FREM3P0C091 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
FREM3P0C091 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.12□□□□□ -2.07
FREM3P0C091 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.12□□□□□ -2.07
FREM3P0C091 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
FREM3P0C091 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
FREM3P0C091 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.11□□□□□ -2.07
FREM3P0C091 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
FREM3P0C091 MIR518C-201ENST00000384822 101 ntBASIC2.11□□□□□ -2.07
FREM3P0C091 NPM1P11-201ENST00000417106 855 ntBASIC2.11□□□□□ -2.07
FREM3P0C091 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.11□□□□□ -2.07
FREM3P0C091 RPL39P40-201ENST00000445481 146 ntBASIC2.11□□□□□ -2.07
FREM3P0C091 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.11□□□□□ -2.07
FREM3P0C091 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.11□□□□□ -2.07
FREM3P0C091 YWHAZP1-201ENST00000556286 722 ntBASIC2.11□□□□□ -2.07
FREM3P0C091 AC022069.1-201ENST00000582910 658 ntBASIC2.11□□□□□ -2.07
FREM3P0C091 AC115085.1-201ENST00000588924 229 ntBASIC2.11□□□□□ -2.07
FREM3P0C091 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.11□□□□□ -2.07
FREM3P0C091 AC117490.2-201ENST00000610042 594 ntBASIC2.11□□□□□ -2.07
FREM3P0C091 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
FREM3P0C091 AC011978.2-201ENST00000569835 2054 ntBASIC2.11□□□□□ -2.07
FREM3P0C091 MTND4P34-201ENST00000572715 1371 ntBASIC2.11□□□□□ -2.07
FREM3P0C091 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
FREM3P0C091 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.11□□□□□ -2.07
FREM3P0C091 RNU1-101P-201ENST00000391171 127 ntBASIC2.11□□□□□ -2.07
FREM3P0C091 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.11□□□□□ -2.07
FREM3P0C091 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.11□□□□□ -2.07
FREM3P0C091 AL137014.1-201ENST00000420490 1226 ntBASIC2.11□□□□□ -2.07
FREM3P0C091 OR51AB1P-201ENST00000429046 620 ntBASIC2.11□□□□□ -2.07
FREM3P0C091 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms