Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.89□□□□□ -1.63
SNRPA1P09661 AL118496.1-201ENST00000440201 1812 ntBASIC4.89□□□□□ -1.63
SNRPA1P09661 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SNRPA1P09661 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SNRPA1P09661 RNU1-108P-201ENST00000362556 161 ntBASIC4.89□□□□□ -1.63
SNRPA1P09661 RN7SKP226-201ENST00000364912 300 ntBASIC4.89□□□□□ -1.63
SNRPA1P09661 HMGB3P23-201ENST00000414981 585 ntBASIC4.89□□□□□ -1.63
SNRPA1P09661 AIMP1P1-201ENST00000418670 937 ntBASIC4.89□□□□□ -1.63
SNRPA1P09661 RPL7P30-201ENST00000420888 709 ntBASIC4.89□□□□□ -1.63
SNRPA1P09661 RPL37P21-201ENST00000435890 276 ntBASIC4.89□□□□□ -1.63
SNRPA1P09661 UBE2V1P8-201ENST00000437166 265 ntBASIC4.89□□□□□ -1.63
SNRPA1P09661 AC244505.5-201ENST00000443639 207 ntBASIC4.89□□□□□ -1.63
SNRPA1P09661 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.89□□□□□ -1.63
SNRPA1P09661 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.89□□□□□ -1.63
SNRPA1P09661 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.89□□□□□ -1.63
SNRPA1P09661 RPS17P13-201ENST00000448974 407 ntBASIC4.89□□□□□ -1.63
SNRPA1P09661 RPL31P61-201ENST00000496160 376 ntBASIC4.89□□□□□ -1.63
SNRPA1P09661 KLRA1P-201ENST00000503499 986 ntBASIC4.89□□□□□ -1.63
SNRPA1P09661 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.89□□□□□ -1.63
SNRPA1P09661 AC026412.2-201ENST00000512270 1075 ntBASIC4.89□□□□□ -1.63
SNRPA1P09661 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SNRPA1P09661 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.89□□□□□ -1.63
SNRPA1P09661 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.89□□□□□ -1.63
SNRPA1P09661 DEFB108A-201ENST00000530110 222 ntBASIC4.89□□□□□ -1.63
SNRPA1P09661 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.89□□□□□ -1.63
SNRPA1P09661 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.89□□□□□ -1.63
SNRPA1P09661 AGGF1P8-201ENST00000562979 1000 ntBASIC4.89□□□□□ -1.63
SNRPA1P09661 AC092325.1-201ENST00000566449 554 ntBASIC4.89□□□□□ -1.63
SNRPA1P09661 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.89□□□□□ -1.63
SNRPA1P09661 MTCO3P24-201ENST00000572729 782 ntBASIC4.89□□□□□ -1.63
SNRPA1P09661 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.89□□□□□ -1.63
SNRPA1P09661 AC244505.7-201ENST00000599675 272 ntBASIC4.89□□□□□ -1.63
SNRPA1P09661 PRELID3BP8-201ENST00000604148 295 ntBASIC4.89□□□□□ -1.63
SNRPA1P09661 AC109347.2-201ENST00000610220 349 ntBASIC4.89□□□□□ -1.63
SNRPA1P09661 AC091834.1-201ENST00000614543 472 ntBASIC4.89□□□□□ -1.63
SNRPA1P09661 U6.42-201ENST00000618440 107 ntBASIC4.89□□□□□ -1.63
SNRPA1P09661 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.89□□□□□ -1.63
SNRPA1P09661 AC011266.1-201ENST00000624119 3569 ntBASIC4.89□□□□□ -1.63
SNRPA1P09661 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.89□□□□□ -1.63
SNRPA1P09661 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SNRPA1P09661 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SNRPA1P09661 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SNRPA1P09661 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.89□□□□□ -1.63
SNRPA1P09661 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.89□□□□□ -1.63
SNRPA1P09661 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SNRPA1P09661 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SNRPA1P09661 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SNRPA1P09661 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
SNRPA1P09661 LINC00561-201ENST00000565815 2738 ntBASIC4.88□□□□□ -1.63
SNRPA1P09661 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.88□□□□□ -1.63
SNRPA1P09661 RNU6-984P-201ENST00000363236 109 ntBASIC4.88□□□□□ -1.63
SNRPA1P09661 SNORD46.1-201ENST00000364139 104 ntBASIC4.88□□□□□ -1.63
SNRPA1P09661 RNU6-777P-201ENST00000364265 104 ntBASIC4.88□□□□□ -1.63
SNRPA1P09661 RNU6-867P-201ENST00000364956 107 ntBASIC4.88□□□□□ -1.63
SNRPA1P09661 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SNRPA1P09661 RNU5A-6P-201ENST00000384136 116 ntBASIC4.88□□□□□ -1.63
SNRPA1P09661 Y_RNA.582-201ENST00000391023 95 ntBASIC4.88□□□□□ -1.63
SNRPA1P09661 BTF3P7-201ENST00000407097 488 ntBASIC4.88□□□□□ -1.63
SNRPA1P09661 RNU6-248P-201ENST00000410720 107 ntBASIC4.88□□□□□ -1.63
SNRPA1P09661 USP9YP13-201ENST00000417797 480 ntBASIC4.88□□□□□ -1.63
SNRPA1P09661 RPL30P16-201ENST00000419341 429 ntBASIC4.88□□□□□ -1.63
SNRPA1P09661 SDCBPP2-201ENST00000424643 885 ntBASIC4.88□□□□□ -1.63
SNRPA1P09661 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.88□□□□□ -1.63
SNRPA1P09661 KCTD9P3-201ENST00000434597 1169 ntBASIC4.88□□□□□ -1.63
SNRPA1P09661 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.88□□□□□ -1.63
SNRPA1P09661 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.88□□□□□ -1.63
SNRPA1P09661 GDI2P2-201ENST00000445131 608 ntBASIC4.88□□□□□ -1.63
SNRPA1P09661 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SNRPA1P09661 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.88□□□□□ -1.63
SNRPA1P09661 MTCO1P48-201ENST00000448024 1096 ntBASIC4.88□□□□□ -1.63
SNRPA1P09661 RPL39P6-201ENST00000448289 150 ntBASIC4.88□□□□□ -1.63
SNRPA1P09661 MTCO3P38-201ENST00000468910 766 ntBASIC4.88□□□□□ -1.63
SNRPA1P09661 AC106707.2-201ENST00000484182 374 ntBASIC4.88□□□□□ -1.63
SNRPA1P09661 AC023424.2-201ENST00000493479 777 ntBASIC4.88□□□□□ -1.63
SNRPA1P09661 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.88□□□□□ -1.63
SNRPA1P09661 AC108941.1-201ENST00000502853 530 ntBASIC4.88□□□□□ -1.63
SNRPA1P09661 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.88□□□□□ -1.63
SNRPA1P09661 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.88□□□□□ -1.63
SNRPA1P09661 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SNRPA1P09661 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.88□□□□□ -1.63
SNRPA1P09661 AL389895.1-201ENST00000554127 252 ntBASIC4.88□□□□□ -1.63
SNRPA1P09661 MIR3913-1-201ENST00000577744 102 ntBASIC4.88□□□□□ -1.63
SNRPA1P09661 MIR5697-201ENST00000578045 78 ntBASIC4.88□□□□□ -1.63
SNRPA1P09661 BNIP3P11-201ENST00000603878 563 ntBASIC4.88□□□□□ -1.63
SNRPA1P09661 AL008729.2-201ENST00000606393 473 ntBASIC4.88□□□□□ -1.63
SNRPA1P09661 AC097468.3-201ENST00000607956 456 ntBASIC4.88□□□□□ -1.63
SNRPA1P09661 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.88□□□□□ -1.63
SNRPA1P09661 AC019176.2-201ENST00000611579 315 ntBASIC4.88□□□□□ -1.63
SNRPA1P09661 AC090970.3-201ENST00000612566 866 ntBASIC4.88□□□□□ -1.63
SNRPA1P09661 AL391261.4-201ENST00000616012 481 ntBASIC4.88□□□□□ -1.63
SNRPA1P09661 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.88□□□□□ -1.63
SNRPA1P09661 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.88□□□□□ -1.63
SNRPA1P09661 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.88□□□□□ -1.63
SNRPA1P09661 BMS1P21-201ENST00000634565 365 ntBASIC4.88□□□□□ -1.63
SNRPA1P09661 AC004520.1-201ENST00000608362 1413 ntBASIC4.88□□□□□ -1.63
SNRPA1P09661 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
SNRPA1P09661 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.88□□□□□ -1.63
SNRPA1P09661 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SNRPA1P09661 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SNRPA1P09661 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 151 ms